RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 LINC00173Q6ZV60 143 aa9.75□□□□□ -0.85
LDB3-205ENST00000429277 SPATA12Q7Z6I5 190 aa9.75□□□□□ -0.85
LDB3-205ENST00000429277 PRB1P04280 392 aa9.75□□□□□ -0.85
LDB3-205ENST00000429277 IGF1P05019 195 aa9.75□□□□□ -0.85
LDB3-205ENST00000429277 COX7BP24311 80 aa9.75□□□□□ -0.85
LDB3-205ENST00000429277 DNAJC9-AS1A6NH13 148 aa9.75□□□□□ -0.85
LDB3-205ENST00000429277 IGHV4-28A0A0C4DH34 117 aa9.74□□□□□ -0.85
LDB3-205ENST00000429277 FXYD2P54710 66 aa9.74□□□□□ -0.85
LDB3-205ENST00000429277 WFDC9Q8NEX5 89 aa9.74□□□□□ -0.85
LDB3-205ENST00000429277 KIR2DL5BQ8NHK3 375 aa9.74□□□□□ -0.85
LDB3-205ENST00000429277 RS1O15537 224 aa9.73□□□□□ -0.85
LDB3-205ENST00000429277 P0C879 139 aa9.73□□□□□ -0.85
LDB3-205ENST00000429277 UNQ9165/PRO28630Q6UXU0 137 aa9.73□□□□□ -0.85
LDB3-205ENST00000429277 ESM1Q9NQ30 184 aa9.73□□□□□ -0.85
LDB3-205ENST00000429277 TNRC6AQ8NDV7 1962 aaKnown RBP9.73□□□□□ -0.85
LDB3-205ENST00000429277 LMO4P61968 165 aa9.73□□□□□ -0.85
LDB3-205ENST00000429277 PROP1O75360 226 aa9.73□□□□□ -0.85
LDB3-205ENST00000429277 NDUFC2O95298 119 aa9.73□□□□□ -0.85
LDB3-205ENST00000429277 MIAQ16674 131 aa9.73□□□□□ -0.85
LDB3-205ENST00000429277 NUPR1O60356 82 aa9.72□□□□□ -0.85
LDB3-205ENST00000429277 C11orf45Q8TAV5 145 aa9.72□□□□□ -0.85
LDB3-205ENST00000429277 MED13LQ71F56 2210 aa9.72□□□□□ -0.85
LDB3-205ENST00000429277 C11orf1Q9H5F2 150 aa9.72□□□□□ -0.85
LDB3-205ENST00000429277 TRBV12-3P01733 135 aa9.72□□□□□ -0.85
LDB3-205ENST00000429277 Q8NA96 180 aa9.72□□□□□ -0.85
LDB3-205ENST00000429277 PLA2G2EQ9NZK7 142 aa9.72□□□□□ -0.85
LDB3-205ENST00000429277 FAM208BQ5VWN6 2430 aa9.71□□□□□ -0.85
LDB3-205ENST00000429277 NOTCH4Q99466 2003 aa9.71□□□□□ -0.85
LDB3-205ENST00000429277 CHD3Q12873 2000 aaKnown RBP9.71□□□□□ -0.85
LDB3-205ENST00000429277 E7EUB6 86 aa9.71□□□□□ -0.85
LDB3-205ENST00000429277 FOXI1Q12951 378 aa9.71□□□□□ -0.85
LDB3-205ENST00000429277 C5orf47Q569G3 176 aa9.71□□□□□ -0.85
LDB3-205ENST00000429277 CCDC140Q96MF4 163 aa9.71□□□□□ -0.85
LDB3-205ENST00000429277 IGKV3D-7A0A0C4DH55 119 aa9.71□□□□□ -0.86
LDB3-205ENST00000429277 NRGNQ92686 78 aa9.71□□□□□ -0.86
LDB3-205ENST00000429277 IGKV1D-37A0A075B6S9 117 aa9.71□□□□□ -0.86
LDB3-205ENST00000429277 Q6YL49 198 aa9.71□□□□□ -0.86
LDB3-205ENST00000429277 A0A1W2PNU3 283 aaPredicted RBP9.7□□□□□ -0.86
LDB3-205ENST00000429277 ZFAND2AQ8N6M9 145 aa9.7□□□□□ -0.86
LDB3-205ENST00000429277 DAND5Q8N907 189 aa9.7□□□□□ -0.86
LDB3-205ENST00000429277 FAM236AA0A1B0GUQ0 79 aa9.7□□□□□ -0.86
LDB3-205ENST00000429277 FAM236BA0A1B0GV22 79 aa9.7□□□□□ -0.86
LDB3-205ENST00000429277 A0A1B0GXF2 115 aa9.7□□□□□ -0.86
LDB3-205ENST00000429277 B5MCH6 92 aa9.7□□□□□ -0.86
LDB3-205ENST00000429277 HIST2H2BDQ6DRA6 164 aa9.7□□□□□ -0.86
LDB3-205ENST00000429277 K7EQG2 157 aa9.69□□□□□ -0.86
LDB3-205ENST00000429277 SPATA25Q9BR10 227 aa9.69□□□□□ -0.86
LDB3-205ENST00000429277 PRORYQ9H606 182 aa9.69□□□□□ -0.86
LDB3-205ENST00000429277 MSMPQ1L6U9 139 aa9.69□□□□□ -0.86
LDB3-205ENST00000429277 LINC00643Q86TS7 51 aa9.69□□□□□ -0.86
LDB3-205ENST00000429277 SEC61GP60059 68 aa9.69□□□□□ -0.86
LDB3-205ENST00000429277 IGLC6P0CF74 106 aa9.68□□□□□ -0.86
LDB3-205ENST00000429277 HILS1P60008 231 aa9.68□□□□□ -0.86
LDB3-205ENST00000429277 Q6ZUT4 128 aa9.68□□□□□ -0.86
LDB3-205ENST00000429277 EBI3Q14213 229 aa9.68□□□□□ -0.86
LDB3-205ENST00000429277 C14orf132Q9NPU4 83 aa9.68□□□□□ -0.86
LDB3-205ENST00000429277 PTPRQQ9UMZ3 2332 aa9.68□□□□□ -0.86
LDB3-205ENST00000429277 REG3AQ06141 175 aa9.68□□□□□ -0.86
LDB3-205ENST00000429277 J3KT08 172 aa9.68□□□□□ -0.86
LDB3-205ENST00000429277 TAX1BP3O14907 124 aa9.68□□□□□ -0.86
LDB3-205ENST00000429277 NFE4Q86UQ8 179 aa9.67□□□□□ -0.86
LDB3-205ENST00000429277 WFDC2Q14508 124 aa9.67□□□□□ -0.86
LDB3-205ENST00000429277 DEFB4AO15263 64 aa9.66□□□□□ -0.86
LDB3-205ENST00000429277 DEFB114Q30KQ6 69 aa9.66□□□□□ -0.86
LDB3-205ENST00000429277 MIFP14174 115 aa9.66□□□□□ -0.86
LDB3-205ENST00000429277 CLEC2BQ92478 149 aa9.66□□□□□ -0.86
LDB3-205ENST00000429277 A0A0J9YXY3 114 aa9.66□□□□□ -0.86
LDB3-205ENST00000429277 IGHV4-31P0DP07 118 aa9.66□□□□□ -0.86
LDB3-205ENST00000429277 H0Y9J4 135 aa9.65□□□□□ -0.86
LDB3-205ENST00000429277 CDPF1Q6NVV7 123 aa9.65□□□□□ -0.86
LDB3-205ENST00000429277 SHISA2Q6UWI4 295 aa9.65□□□□□ -0.86
LDB3-205ENST00000429277 TRAV26-1A0A087WT03 109 aa9.65□□□□□ -0.86
LDB3-205ENST00000429277 CRYGBP07316 175 aa9.65□□□□□ -0.86
LDB3-205ENST00000429277 ATP5EP2Q5VTU8 51 aa9.65□□□□□ -0.86
LDB3-205ENST00000429277 IBA57-AS1B1ANH7 110 aa9.65□□□□□ -0.86
LDB3-205ENST00000429277 TTTY13Q9BZ97 58 aa9.65□□□□□ -0.86
LDB3-205ENST00000429277 HIVEP2P31629 2446 aa9.65□□□□□ -0.87
LDB3-205ENST00000429277 BPY2O14599 106 aa9.65□□□□□ -0.87
LDB3-205ENST00000429277 Q6ZTI0 123 aa9.65□□□□□ -0.87
LDB3-205ENST00000429277 MLST8Q9BVC4 326 aa9.65□□□□□ -0.87
LDB3-205ENST00000429277 TDRG1Q3Y452 100 aa9.64□□□□□ -0.87
LDB3-205ENST00000429277 FAM222AQ5U5X8 452 aa9.64□□□□□ -0.87
LDB3-205ENST00000429277 DYSFO75923 2080 aa9.64□□□□□ -0.87
LDB3-205ENST00000429277 DENND4CQ5VZ89 1909 aa9.64□□□□□ -0.87
LDB3-205ENST00000429277 TRBV6-4A0A1B0GX49 114 aa9.64□□□□□ -0.87
LDB3-205ENST00000429277 DEFB1P60022 68 aa9.64□□□□□ -0.87
LDB3-205ENST00000429277 LINC00269Q8N2A0 174 aa9.64□□□□□ -0.87
LDB3-205ENST00000429277 MUC6Q6W4X9 2439 aa9.64□□□□□ -0.87
LDB3-205ENST00000429277 CHCHD10Q8WYQ3 142 aaPredicted RBP9.63□□□□□ -0.87
LDB3-205ENST00000429277 RNF183Q96D59 192 aa9.63□□□□□ -0.87
LDB3-205ENST00000429277 ZNF80P51504 273 aaPredicted RBP9.63□□□□□ -0.87
LDB3-205ENST00000429277 IGLV2-8P01709 118 aa9.62□□□□□ -0.87
LDB3-205ENST00000429277 ACACBO00763 2458 aa9.62□□□□□ -0.87
LDB3-205ENST00000429277 SPANXB1Q9NS25 103 aaPredicted RBP9.62□□□□□ -0.87
LDB3-205ENST00000429277 CRYGDP07320 174 aa9.62□□□□□ -0.87
LDB3-205ENST00000429277 DEFB131BA0A096LNP1 70 aa9.62□□□□□ -0.87
LDB3-205ENST00000429277 NEXN-AS1Q8NBZ9 246 aa9.62□□□□□ -0.87
LDB3-205ENST00000429277 UPK3BQ9BT76 320 aa9.61□□□□□ -0.87
LDB3-205ENST00000429277 PLXNB3Q9ULL4 1909 aa9.61□□□□□ -0.87
LDB3-205ENST00000429277 SS18L2Q9UHA2 77 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms