RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 SPTAN1Q13813 2472 aaKnown RBP13.67□□□□□ -0.22
ARHGEF28-203ENST00000426542 TRBV6-1A0A0K0K1D8 114 aa13.67□□□□□ -0.22
ARHGEF28-203ENST00000426542 WISP2O76076 250 aa13.67□□□□□ -0.22
ARHGEF28-203ENST00000426542 TRBV10-2A0A0K0K1G8 114 aa13.66□□□□□ -0.22
ARHGEF28-203ENST00000426542 ODF1Q14990 250 aa13.66□□□□□ -0.22
ARHGEF28-203ENST00000426542 FRMD6-AS1P0C7T7 363 aa13.66□□□□□ -0.22
ARHGEF28-203ENST00000426542 Q6ZUT4 128 aa13.66□□□□□ -0.22
ARHGEF28-203ENST00000426542 H0Y9J4 135 aa13.66□□□□□ -0.22
ARHGEF28-203ENST00000426542 ZGRF1Q86YA3 2104 aa13.65□□□□□ -0.22
ARHGEF28-203ENST00000426542 TP53TG3Q9ULZ0 132 aa13.65□□□□□ -0.22
ARHGEF28-203ENST00000426542 P0DMU3 169 aa13.65□□□□□ -0.22
ARHGEF28-203ENST00000426542 FAM231AP0DMU4 169 aa13.65□□□□□ -0.22
ARHGEF28-203ENST00000426542 FAM231CP0DMU5 169 aa13.65□□□□□ -0.22
ARHGEF28-203ENST00000426542 TNRC6BQ9UPQ9 1833 aaKnown RBP13.65□□□□□ -0.22
ARHGEF28-203ENST00000426542 INSL3P51460 131 aa13.65□□□□□ -0.22
ARHGEF28-203ENST00000426542 C20orf203Q8NBC4 194 aa13.65□□□□□ -0.22
ARHGEF28-203ENST00000426542 CHD3Q12873 2000 aaKnown RBP13.64□□□□□ -0.23
ARHGEF28-203ENST00000426542 MED13Q9UHV7 2174 aa13.64□□□□□ -0.23
ARHGEF28-203ENST00000426542 TMEM256-PLSCR3K7ERE1 68 aa13.64□□□□□ -0.23
ARHGEF28-203ENST00000426542 B9D2Q9BPU9 175 aa13.64□□□□□ -0.23
ARHGEF28-203ENST00000426542 COX7BP24311 80 aa13.64□□□□□ -0.23
ARHGEF28-203ENST00000426542 CCDC140Q96MF4 163 aa13.64□□□□□ -0.23
ARHGEF28-203ENST00000426542 C11orf45Q8TAV5 145 aa13.63□□□□□ -0.23
ARHGEF28-203ENST00000426542 C19orf71A6NCJ1 209 aa13.63□□□□□ -0.23
ARHGEF28-203ENST00000426542 PLXNB3Q9ULL4 1909 aa13.63□□□□□ -0.23
ARHGEF28-203ENST00000426542 IGKV2-24A0A0C4DH68 120 aa13.63□□□□□ -0.23
ARHGEF28-203ENST00000426542 TNRC6AQ8NDV7 1962 aaKnown RBP13.62□□□□□ -0.23
ARHGEF28-203ENST00000426542 FOXI1Q12951 378 aa13.62□□□□□ -0.23
ARHGEF28-203ENST00000426542 Q8NA96 180 aa13.62□□□□□ -0.23
ARHGEF28-203ENST00000426542 SPRY4Q9C004 299 aa13.62□□□□□ -0.23
ARHGEF28-203ENST00000426542 NOTCH3Q9UM47 2321 aa13.62□□□□□ -0.23
ARHGEF28-203ENST00000426542 TAX1BP3O14907 124 aa13.62□□□□□ -0.23
ARHGEF28-203ENST00000426542 TRAV26-1A0A087WT03 109 aa13.62□□□□□ -0.23
ARHGEF28-203ENST00000426542 NACAE9PAV3 2078 aa13.61□□□□□ -0.23
ARHGEF28-203ENST00000426542 IGKV1D-37A0A075B6S9 117 aa13.61□□□□□ -0.23
ARHGEF28-203ENST00000426542 LINC01548A6NM66 108 aa13.61□□□□□ -0.23
ARHGEF28-203ENST00000426542 SPATA25Q9BR10 227 aa13.61□□□□□ -0.23
ARHGEF28-203ENST00000426542 PCNX1Q96RV3 2341 aa13.61□□□□□ -0.23
ARHGEF28-203ENST00000426542 ZNF80P51504 273 aaPredicted RBP13.61□□□□□ -0.23
ARHGEF28-203ENST00000426542 TRBV10-1A0A0K0K1A3 114 aa13.6□□□□□ -0.23
ARHGEF28-203ENST00000426542 FBXL19-AS1Q494R0 122 aa13.6□□□□□ -0.23
ARHGEF28-203ENST00000426542 LINC00269Q8N2A0 174 aa13.6□□□□□ -0.23
ARHGEF28-203ENST00000426542 IGKV2D-26A0A0A0MRZ7 120 aa13.6□□□□□ -0.23
ARHGEF28-203ENST00000426542 TNFRSF13BO14836 293 aaPredicted RBP13.6□□□□□ -0.23
ARHGEF28-203ENST00000426542 Q6ZTI0 123 aa13.6□□□□□ -0.23
ARHGEF28-203ENST00000426542 CRYGBP07316 175 aa13.6□□□□□ -0.23
ARHGEF28-203ENST00000426542 NDUFA11Q86Y39 141 aa13.6□□□□□ -0.23
ARHGEF28-203ENST00000426542 LOXL1Q08397 574 aaPredicted RBP13.59□□□□□ -0.23
ARHGEF28-203ENST00000426542 MIAQ16674 131 aa13.59□□□□□ -0.23
ARHGEF28-203ENST00000426542 ZFAND2AQ8N6M9 145 aa13.59□□□□□ -0.23
ARHGEF28-203ENST00000426542 ODF3BA8MYP8 253 aa13.58□□□□□ -0.24
ARHGEF28-203ENST00000426542 NBASA2RRP1 2371 aa13.58□□□□□ -0.24
ARHGEF28-203ENST00000426542 H3BT86 120 aa13.58□□□□□ -0.24
ARHGEF28-203ENST00000426542 REG3AQ06141 175 aa13.58□□□□□ -0.24
ARHGEF28-203ENST00000426542 RNF183Q96D59 192 aa13.57□□□□□ -0.24
ARHGEF28-203ENST00000426542 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.57□□□□□ -0.241e-6■■■■□ 26.7
ARHGEF28-203ENST00000426542 C19orf84I3L1E1 186 aa13.56□□□□□ -0.24
ARHGEF28-203ENST00000426542 C14orf177Q52M58 125 aa13.56□□□□□ -0.24
ARHGEF28-203ENST00000426542 LMO4P61968 165 aa13.56□□□□□ -0.24
ARHGEF28-203ENST00000426542 ADAMTS9Q9P2N4 1935 aa13.55□□□□□ -0.24
ARHGEF28-203ENST00000426542 FAM222AQ5U5X8 452 aa13.55□□□□□ -0.24
ARHGEF28-203ENST00000426542 FAM110AQ9BQ89 295 aa13.55□□□□□ -0.24
ARHGEF28-203ENST00000426542 C11orf1Q9H5F2 150 aa13.55□□□□□ -0.24
ARHGEF28-203ENST00000426542 SMIM20Q8N5G0 67 aa13.55□□□□□ -0.24
ARHGEF28-203ENST00000426542 PTH2Q96A98 100 aa13.55□□□□□ -0.24
ARHGEF28-203ENST00000426542 HIGD2AQ9BW72 106 aa13.55□□□□□ -0.24
ARHGEF28-203ENST00000426542 OBSL1O75147 1896 aa13.55□□□□□ -0.24
ARHGEF28-203ENST00000426542 IGHV4-31P0DP07 118 aa13.55□□□□□ -0.24
ARHGEF28-203ENST00000426542 IL17DQ8TAD2 202 aa13.55□□□□□ -0.24
ARHGEF28-203ENST00000426542 UFSP1Q6NVU6 142 aa13.55□□□□□ -0.24
ARHGEF28-203ENST00000426542 Q6YL49 198 aa13.55□□□□□ -0.24
ARHGEF28-203ENST00000426542 NDUFC2O95298 119 aa13.54□□□□□ -0.24
ARHGEF28-203ENST00000426542 A0A0J9YXY3 114 aa13.54□□□□□ -0.24
ARHGEF28-203ENST00000426542 LINC00322Q6ZN03 302 aaPredicted RBP13.54□□□□□ -0.24
ARHGEF28-203ENST00000426542 CACNA1HO95180 2353 aa13.54□□□□□ -0.24
ARHGEF28-203ENST00000426542 IGKV4-1P06312 121 aa13.53□□□□□ -0.24
ARHGEF28-203ENST00000426542 PLA2G5P39877 138 aa13.53□□□□□ -0.24
ARHGEF28-203ENST00000426542 SEC61GP60059 68 aa13.53□□□□□ -0.24
ARHGEF28-203ENST00000426542 LINC00467Q9BRT7 94 aa13.53□□□□□ -0.24
ARHGEF28-203ENST00000426542 TCL1BO95988 128 aa13.53□□□□□ -0.24
ARHGEF28-203ENST00000426542 CRYGDP07320 174 aa13.53□□□□□ -0.24
ARHGEF28-203ENST00000426542 CHCHD10Q8WYQ3 142 aaPredicted RBP13.52□□□□□ -0.24
ARHGEF28-203ENST00000426542 C20orf173Q96LM9 149 aa13.52□□□□□ -0.24
ARHGEF28-203ENST00000426542 PRORYQ9H606 182 aa13.52□□□□□ -0.24
ARHGEF28-203ENST00000426542 PDE6GP18545 87 aa13.52□□□□□ -0.25
ARHGEF28-203ENST00000426542 ODF3Q96PU9 254 aa13.52□□□□□ -0.25
ARHGEF28-203ENST00000426542 LRRC75A-AS1Q8N1F1 130 aa13.52□□□□□ -0.25
ARHGEF28-203ENST00000426542 RNASE8Q8TDE3 154 aaKnown RBP13.52□□□□□ -0.25
ARHGEF28-203ENST00000426542 A0A1B0GXF2 115 aa13.51□□□□□ -0.25
ARHGEF28-203ENST00000426542 SHANK1Q9Y566 2161 aa13.51□□□□□ -0.25
ARHGEF28-203ENST00000426542 J3KT08 172 aa13.51□□□□□ -0.25
ARHGEF28-203ENST00000426542 P0C879 139 aa13.51□□□□□ -0.25
ARHGEF28-203ENST00000426542 A0A096LNI7 61 aa13.5□□□□□ -0.25
ARHGEF28-203ENST00000426542 LRCOL1A6NCL2 159 aa13.5□□□□□ -0.25
ARHGEF28-203ENST00000426542 LYRM9A8MSI8 78 aa13.5□□□□□ -0.25
ARHGEF28-203ENST00000426542 DEFB114Q30KQ6 69 aa13.5□□□□□ -0.25
ARHGEF28-203ENST00000426542 UPK3BQ9BT76 320 aa13.5□□□□□ -0.25
ARHGEF28-203ENST00000426542 IGLV2-8P01709 118 aa13.5□□□□□ -0.25
ARHGEF28-203ENST00000426542 HIST2H2BDQ6DRA6 164 aa13.5□□□□□ -0.25
ARHGEF28-203ENST00000426542 BPY2O14599 106 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms