RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 NIT2Q9NQR4 276 aa16.73■□□□□ 0.27
APOE-202ENST00000425718 URGCP-MRPS24S4R325 110 aa16.73■□□□□ 0.27
APOE-202ENST00000425718 LOC100131303A0A0U1RQF7 123 aa16.72■□□□□ 0.27
APOE-202ENST00000425718 GAGE12JA6NER3 117 aa16.72■□□□□ 0.27
APOE-202ENST00000425718 GAGE1Q13065 139 aa16.72■□□□□ 0.27
APOE-202ENST00000425718 GAGE4Q13068 117 aa16.72■□□□□ 0.27
APOE-202ENST00000425718 GAGE5Q13069 117 aa16.72■□□□□ 0.27
APOE-202ENST00000425718 GAGE13Q4V321 117 aa16.72■□□□□ 0.27
APOE-202ENST00000425718 AMN1Q8IY45 258 aa16.72■□□□□ 0.27
APOE-202ENST00000425718 NEXN-AS1Q8NBZ9 246 aa16.72■□□□□ 0.27
APOE-202ENST00000425718 ZNRF2Q8NHG8 242 aa16.72■□□□□ 0.27
APOE-202ENST00000425718 LINC00694P0DN24 101 aa16.71■□□□□ 0.27
APOE-202ENST00000425718 TMEM97Q5BJF2 176 aa16.71■□□□□ 0.27
APOE-202ENST00000425718 SMCO4Q9NRQ5 59 aa16.71■□□□□ 0.27
APOE-202ENST00000425718 PLECQ15149 4684 aaKnown RBP16.71■□□□□ 0.27
APOE-202ENST00000425718 PPBPP02775 128 aa16.7■□□□□ 0.26
APOE-202ENST00000425718 DAZ4Q86SG3 579 aaKnown RBP16.7■□□□□ 0.26
APOE-202ENST00000425718 RNF185Q96GF1 192 aa16.7■□□□□ 0.26
APOE-202ENST00000425718 GTSF1LQ9H1H1 148 aa16.7■□□□□ 0.26
APOE-202ENST00000425718 DAZ3Q9NR90 486 aaKnown RBP16.7■□□□□ 0.26
APOE-202ENST00000425718 UBE2D3P61077 147 aa16.69■□□□□ 0.26
APOE-202ENST00000425718 UBE2D2P62837 147 aa16.69■□□□□ 0.26
APOE-202ENST00000425718 HLA-DQA1P01909 254 aa16.68■□□□□ 0.26
APOE-202ENST00000425718 MT-ND6P03923 174 aa16.68■□□□□ 0.26
APOE-202ENST00000425718 LINC00476Q8WZB0 136 aa16.68■□□□□ 0.26
APOE-202ENST00000425718 TRBV24-1A0A075B6N3 115 aa16.67■□□□□ 0.26
APOE-202ENST00000425718 MRPL51Q4U2R6 128 aaKnown RBP16.67■□□□□ 0.26
APOE-202ENST00000425718 OR10J3Q5JRS4 329 aa16.67■□□□□ 0.26
APOE-202ENST00000425718 LYPD5Q6UWN5 251 aa16.67■□□□□ 0.26
APOE-202ENST00000425718 GNB1LQ9BYB4 327 aa16.67■□□□□ 0.26
APOE-202ENST00000425718 S100A1P23297 94 aa16.66■□□□□ 0.26
APOE-202ENST00000425718 CKS2P33552 79 aa16.66■□□□□ 0.26
APOE-202ENST00000425718 ESRGQ1W209 222 aa16.66■□□□□ 0.26
APOE-202ENST00000425718 MRPS16Q9Y3D3 137 aaKnown RBP16.66■□□□□ 0.26
APOE-202ENST00000425718 TRAV26-2A0A0B4J265 109 aa16.65■□□□□ 0.26
APOE-202ENST00000425718 TRBV6-5A0A0K0K1A5 114 aa16.65■□□□□ 0.26
APOE-202ENST00000425718 ELOBQ15370 118 aa16.65■□□□□ 0.26
APOE-202ENST00000425718 ATRAIDQ6UW56 229 aa16.65■□□□□ 0.26
APOE-202ENST00000425718 UPK3BQ9BT76 320 aa16.65■□□□□ 0.26
APOE-202ENST00000425718 PHOX2AO14813 284 aa16.64■□□□□ 0.25
APOE-202ENST00000425718 LY6G6CO95867 125 aa16.64■□□□□ 0.25
APOE-202ENST00000425718 ORMDL3Q8N138 153 aa16.64■□□□□ 0.25
APOE-202ENST00000425718 ST20Q9HBF5 79 aa16.64■□□□□ 0.25
APOE-202ENST00000425718 LAMTOR2Q9Y2Q5 125 aa16.64■□□□□ 0.25
APOE-202ENST00000425718 TRAV8-6A0A0B4J262 113 aa16.63■□□□□ 0.25
APOE-202ENST00000425718 LELP1Q5T871 98 aa16.63■□□□□ 0.25
APOE-202ENST00000425718 TMEM136Q6ZRR5 245 aa16.63■□□□□ 0.25
APOE-202ENST00000425718 LINC00588Q9Y4M8 146 aa16.63■□□□□ 0.25
APOE-202ENST00000425718 Q9UF83 564 aa16.62■□□□□ 0.25
APOE-202ENST00000425718 LCE6AA0A183 80 aa16.61■□□□□ 0.25
APOE-202ENST00000425718 C20orf78Q9BR46 151 aa16.61■□□□□ 0.25
APOE-202ENST00000425718 D6R8Y8 96 aa16.6■□□□□ 0.25
APOE-202ENST00000425718 RPL39LQ96EH5 51 aaKnown RBP16.6■□□□□ 0.25
APOE-202ENST00000425718 ALMS1Q8TCU4 4167 aa16.6■□□□□ 0.25
APOE-202ENST00000425718 SDHAF1A6NFY7 115 aa16.59■□□□□ 0.25
APOE-202ENST00000425718 APCSP02743 223 aa16.59■□□□□ 0.25
APOE-202ENST00000425718 PKIAP61925 76 aa16.59■□□□□ 0.25
APOE-202ENST00000425718 TGIF2-C20orf24A0A0A6YYL0 155 aa16.58■□□□□ 0.24
APOE-202ENST00000425718 TCAPO15273 167 aa16.58■□□□□ 0.24
APOE-202ENST00000425718 NCR2O95944 276 aa16.58■□□□□ 0.24
APOE-202ENST00000425718 COTL1Q14019 142 aa16.58■□□□□ 0.24
APOE-202ENST00000425718 LYSTQ99698 3801 aa16.57■□□□□ 0.24
APOE-202ENST00000425718 SUMO2P61956 95 aaKnown RBP16.57■□□□□ 0.24
APOE-202ENST00000425718 RPL32P62910 135 aaKnown RBP16.57■□□□□ 0.24
APOE-202ENST00000425718 NRACQ8N912 160 aa16.57■□□□□ 0.24
APOE-202ENST00000425718 PRELID3AQ96N28 172 aa16.57■□□□□ 0.24
APOE-202ENST00000425718 TRBV25-1A0A075B6N4 114 aa16.56■□□□□ 0.24
APOE-202ENST00000425718 TRBV6-8A0A0A6YYG3 113 aa16.56■□□□□ 0.24
APOE-202ENST00000425718 SMKR1H3BMG3 65 aa16.56■□□□□ 0.24
APOE-202ENST00000425718 I3L3M4 83 aa16.56■□□□□ 0.24
APOE-202ENST00000425718 K7EP13 123 aa16.56■□□□□ 0.24
APOE-202ENST00000425718 VCYO14598 125 aa16.56■□□□□ 0.24
APOE-202ENST00000425718 TNFRSF6BO95407 300 aa16.56■□□□□ 0.24
APOE-202ENST00000425718 PMCHP20382 165 aa16.56■□□□□ 0.24
APOE-202ENST00000425718 CBLN2Q8IUK8 224 aa16.56■□□□□ 0.24
APOE-202ENST00000425718 TMEM70Q9BUB7 260 aa16.56■□□□□ 0.24
APOE-202ENST00000425718 SIVA1O15304 175 aa16.55■□□□□ 0.24
APOE-202ENST00000425718 ATP6V1G1O75348 118 aa16.55■□□□□ 0.24
APOE-202ENST00000425718 RPS10P46783 165 aaKnown RBP16.55■□□□□ 0.24
APOE-202ENST00000425718 YPEL4Q96NS1 127 aa16.55■□□□□ 0.24
APOE-202ENST00000425718 Q9H8V8 135 aa16.55■□□□□ 0.24
APOE-202ENST00000425718 IGHV1-24A0A0C4DH33 117 aa16.54■□□□□ 0.24
APOE-202ENST00000425718 IGHV3-38A0A0C4DH36 116 aa16.54■□□□□ 0.24
APOE-202ENST00000425718 TRBV27A0A0K0K1C4 114 aa16.54■□□□□ 0.24
APOE-202ENST00000425718 POLR2KP53803 58 aaKnown RBP16.54■□□□□ 0.24
APOE-202ENST00000425718 KIR2DL4Q99706 377 aa16.54■□□□□ 0.24
APOE-202ENST00000425718 MRPL18Q9H0U6 180 aaKnown RBP16.54■□□□□ 0.24
APOE-202ENST00000425718 TRAPPC1Q9Y5R8 145 aa16.54■□□□□ 0.24
APOE-202ENST00000425718 FABP9Q0Z7S8 132 aa16.53■□□□□ 0.24
APOE-202ENST00000425718 TTC32Q5I0X7 151 aa16.53■□□□□ 0.24
APOE-202ENST00000425718 TRAV9-2A0A087WT02 112 aa16.52■□□□□ 0.24
APOE-202ENST00000425718 IQCJQ1A5X6 159 aa16.52■□□□□ 0.24
APOE-202ENST00000425718 CHCHD7Q9BUK0 85 aa16.52■□□□□ 0.24
APOE-202ENST00000425718 MAP1LC3AQ9H492 121 aa16.52■□□□□ 0.24
APOE-202ENST00000425718 GAS8-AS1O95177 125 aa16.51■□□□□ 0.23
APOE-202ENST00000425718 PRSS47A8MTI9 375 aa16.5■□□□□ 0.23
APOE-202ENST00000425718 NPYP01303 97 aa16.5■□□□□ 0.23
APOE-202ENST00000425718 SMIM2Q9BVW6 85 aa16.5■□□□□ 0.23
APOE-202ENST00000425718 DNAH1Q9P2D7 4330 aa16.49■□□□□ 0.23
APOE-202ENST00000425718 VPS13DQ5THJ4 4388 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms