RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 INAFM2P0DMQ5 153 aa8.69□□□□□ -1.02
VRK3-203ENST00000424804 RAB4BP61018 213 aa8.69□□□□□ -1.02
VRK3-203ENST00000424804 CACNG7P62955 275 aa8.69□□□□□ -1.02
VRK3-203ENST00000424804 TEX261Q6UWH6 196 aa8.69□□□□□ -1.02
VRK3-203ENST00000424804 Q9HAA7 133 aa8.69□□□□□ -1.02
VRK3-203ENST00000424804 ZNF727A8MUV8 499 aa8.68□□□□□ -1.02
VRK3-203ENST00000424804 K7EP13 123 aa8.68□□□□□ -1.02
VRK3-203ENST00000424804 SRP19P09132 144 aaKnown RBP8.68□□□□□ -1.02
VRK3-203ENST00000424804 LINC00694P0DN24 101 aa8.68□□□□□ -1.02
VRK3-203ENST00000424804 Q5VSD8 79 aa8.68□□□□□ -1.02
VRK3-203ENST00000424804 C10orf126Q8N4M7 172 aa8.68□□□□□ -1.02
VRK3-203ENST00000424804 TRBV7-3A0A075B6L6 115 aa8.67□□□□□ -1.02
VRK3-203ENST00000424804 TRBV10-1A0A0K0K1A3 114 aa8.67□□□□□ -1.02
VRK3-203ENST00000424804 F2Z2F3 143 aa8.67□□□□□ -1.02
VRK3-203ENST00000424804 EREGO14944 169 aa8.67□□□□□ -1.02
VRK3-203ENST00000424804 NTF3P20783 257 aa8.67□□□□□ -1.02
VRK3-203ENST00000424804 TWIST1Q15672 202 aa8.67□□□□□ -1.02
VRK3-203ENST00000424804 Q8N3U1 123 aa8.67□□□□□ -1.02
VRK3-203ENST00000424804 A0A087WWC5 75 aa8.66□□□□□ -1.02
VRK3-203ENST00000424804 PSCAO43653 123 aa8.66□□□□□ -1.02
VRK3-203ENST00000424804 SMR3BP02814 79 aaPredicted RBP8.66□□□□□ -1.02
VRK3-203ENST00000424804 TRGC1P0CF51 173 aa8.66□□□□□ -1.02
VRK3-203ENST00000424804 LINC01556Q5JQF7 62 aa8.66□□□□□ -1.02
VRK3-203ENST00000424804 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.66□□□□□ -1.02
VRK3-203ENST00000424804 NEXN-AS1Q8NBZ9 246 aa8.66□□□□□ -1.02
VRK3-203ENST00000424804 URGCP-MRPS24S4R325 110 aa8.66□□□□□ -1.02
VRK3-203ENST00000424804 GCSHP23434 173 aa8.65□□□□□ -1.02
VRK3-203ENST00000424804 UBE2D3P61077 147 aa8.65□□□□□ -1.02
VRK3-203ENST00000424804 UBE2D2P62837 147 aa8.65□□□□□ -1.02
VRK3-203ENST00000424804 HAMPP81172 84 aa8.65□□□□□ -1.02
VRK3-203ENST00000424804 PGLYRP4Q96LB8 373 aa8.65□□□□□ -1.02
VRK3-203ENST00000424804 KIF25-AS1Q9Y6Z4 181 aa8.65□□□□□ -1.02
VRK3-203ENST00000424804 IBA57-AS1B1ANH7 110 aa8.64□□□□□ -1.03
VRK3-203ENST00000424804 CTRLP40313 264 aa8.64□□□□□ -1.03
VRK3-203ENST00000424804 PEA15Q15121 130 aa8.64□□□□□ -1.03
VRK3-203ENST00000424804 SUMO4Q6EEV6 95 aa8.64□□□□□ -1.03
VRK3-203ENST00000424804 KCNIP4Q6PIL6 250 aa8.64□□□□□ -1.03
VRK3-203ENST00000424804 DAZ4Q86SG3 579 aaKnown RBP8.64□□□□□ -1.03
VRK3-203ENST00000424804 LINC01551Q86U37 167 aa8.64□□□□□ -1.03
VRK3-203ENST00000424804 DPH3P1Q9H4G8 78 aa8.64□□□□□ -1.03
VRK3-203ENST00000424804 DAZ3Q9NR90 486 aaKnown RBP8.64□□□□□ -1.03
VRK3-203ENST00000424804 FAM30AQ9NZY2 134 aa8.64□□□□□ -1.03
VRK3-203ENST00000424804 A0A087WX48 190 aa8.63□□□□□ -1.03
VRK3-203ENST00000424804 A8MWL6 223 aa8.63□□□□□ -1.03
VRK3-203ENST00000424804 TMEM262E9PQX1 116 aa8.63□□□□□ -1.03
VRK3-203ENST00000424804 H7C1H1 209 aa8.63□□□□□ -1.03
VRK3-203ENST00000424804 SRSF3P84103 164 aaKnown RBP8.63□□□□□ -1.03
VRK3-203ENST00000424804 ADIRFQ15847 76 aa8.63□□□□□ -1.03
VRK3-203ENST00000424804 FAM231DQ6ZW35 169 aa8.63□□□□□ -1.03
VRK3-203ENST00000424804 SMIM15Q7Z3B0 74 aa8.63□□□□□ -1.03
VRK3-203ENST00000424804 OR10G8Q8NGN5 311 aa8.63□□□□□ -1.03
VRK3-203ENST00000424804 GTSF1Q8WW33 167 aa8.63□□□□□ -1.03
VRK3-203ENST00000424804 BORCS7Q96B45 105 aa8.63□□□□□ -1.03
VRK3-203ENST00000424804 C9JQL5 133 aa8.62□□□□□ -1.03
VRK3-203ENST00000424804 WFDC2Q14508 124 aa8.62□□□□□ -1.03
VRK3-203ENST00000424804 TMEM241Q24JQ0 296 aa8.62□□□□□ -1.03
VRK3-203ENST00000424804 DEFB104AQ8WTQ1 72 aa8.62□□□□□ -1.03
VRK3-203ENST00000424804 CHCHD5Q9BSY4 110 aa8.62□□□□□ -1.03
VRK3-203ENST00000424804 LRP1Q07954 4544 aaKnown RBP8.61□□□□□ -1.03
VRK3-203ENST00000424804 TRBV6-8A0A0A6YYG3 113 aa8.61□□□□□ -1.03
VRK3-203ENST00000424804 RASL11AQ6T310 242 aa8.61□□□□□ -1.03
VRK3-203ENST00000424804 NIT1Q86X76 327 aa8.61□□□□□ -1.03
VRK3-203ENST00000424804 C15orf54Q8N8G6 183 aa8.61□□□□□ -1.03
VRK3-203ENST00000424804 FRZBQ92765 325 aa8.61□□□□□ -1.03
VRK3-203ENST00000424804 KLK12Q9UKR0 248 aa8.61□□□□□ -1.03
VRK3-203ENST00000424804 TRAV26-2A0A0B4J265 109 aa8.6□□□□□ -1.03
VRK3-203ENST00000424804 M0QY20 66 aa8.6□□□□□ -1.03
VRK3-203ENST00000424804 NDUFS6O75380 124 aaKnown RBP8.6□□□□□ -1.03
VRK3-203ENST00000424804 RAB14P61106 215 aa8.6□□□□□ -1.03
VRK3-203ENST00000424804 RPL23P62829 140 aaKnown RBP8.6□□□□□ -1.03
VRK3-203ENST00000424804 FAM74A3Q4VXF1 159 aa8.6□□□□□ -1.03
VRK3-203ENST00000424804 WDR73Q6P4I2 378 aa8.6□□□□□ -1.03
VRK3-203ENST00000424804 Q8N814 137 aa8.6□□□□□ -1.03
VRK3-203ENST00000424804 TMEM70Q9BUB7 260 aa8.6□□□□□ -1.03
VRK3-203ENST00000424804 OSTCQ9NRP0 149 aa8.6□□□□□ -1.03
VRK3-203ENST00000424804 FAT3Q8TDW7 4589 aa8.6□□□□□ -1.03
VRK3-203ENST00000424804 IGLV5-52A0A0A0MRZ9 124 aa8.59□□□□□ -1.03
VRK3-203ENST00000424804 HIGD1CA8MV81 97 aa8.59□□□□□ -1.03
VRK3-203ENST00000424804 FOXA3P55318 350 aaPredicted RBP8.59□□□□□ -1.03
VRK3-203ENST00000424804 CT83Q5H943 113 aa8.59□□□□□ -1.03
VRK3-203ENST00000424804 NTN5Q8WTR8 489 aaPredicted RBP8.59□□□□□ -1.03
VRK3-203ENST00000424804 ISOC2Q96AB3 205 aa8.59□□□□□ -1.03
VRK3-203ENST00000424804 UBE2WQ96B02 151 aa8.59□□□□□ -1.03
VRK3-203ENST00000424804 DNAJC30Q96LL9 226 aa8.59□□□□□ -1.03
VRK3-203ENST00000424804 NAT8Q9UHE5 227 aa8.59□□□□□ -1.03
VRK3-203ENST00000424804 TRAV8-3A0A0A6YYJ7 113 aa8.58□□□□□ -1.04
VRK3-203ENST00000424804 GAGE6Q13070 117 aa8.58□□□□□ -1.04
VRK3-203ENST00000424804 LAGE3Q14657 143 aa8.58□□□□□ -1.04
VRK3-203ENST00000424804 TMEM97Q5BJF2 176 aa8.58□□□□□ -1.04
VRK3-203ENST00000424804 TSKUQ8WUA8 353 aa8.58□□□□□ -1.04
VRK3-203ENST00000424804 TM2D2Q9BX73 214 aa8.58□□□□□ -1.04
VRK3-203ENST00000424804 CNFNQ9BYD5 112 aa8.58□□□□□ -1.04
VRK3-203ENST00000424804 NIT2Q9NQR4 276 aa8.58□□□□□ -1.04
VRK3-203ENST00000424804 PKHD1L1Q86WI1 4243 aa8.58□□□□□ -1.04
VRK3-203ENST00000424804 TRBV25-1A0A075B6N4 114 aa8.57□□□□□ -1.04
VRK3-203ENST00000424804 IGKV2D-24A0A075B6R9 120 aa8.57□□□□□ -1.04
VRK3-203ENST00000424804 A0A1B0GUT8 65 aa8.57□□□□□ -1.04
VRK3-203ENST00000424804 ANGP03950 147 aaKnown RBP8.57□□□□□ -1.04
VRK3-203ENST00000424804 ELOBQ15370 118 aa8.57□□□□□ -1.04
VRK3-203ENST00000424804 MPV17L2Q567V2 206 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms