RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-208ENST00000422080 MEF2BQ02080 365 aaPredicted RBP11.72□□□□□ -0.53
HDLBP-208ENST00000422080 Q0VG73 95 aa11.72□□□□□ -0.53
HDLBP-208ENST00000422080 ATRAIDQ6UW56 229 aa11.72□□□□□ -0.53
HDLBP-208ENST00000422080 SLC51BQ86UW2 128 aa11.72□□□□□ -0.53
HDLBP-208ENST00000422080 Q8N976 141 aa11.72□□□□□ -0.53
HDLBP-208ENST00000422080 UBE2WQ96B02 151 aa11.72□□□□□ -0.53
HDLBP-208ENST00000422080 DNAJC30Q96LL9 226 aa11.72□□□□□ -0.53
HDLBP-208ENST00000422080 AP1S3Q96PC3 154 aa11.72□□□□□ -0.53
HDLBP-208ENST00000422080 RAB19A4D1S5 217 aa11.71□□□□□ -0.53
HDLBP-208ENST00000422080 C19orf71A6NCJ1 209 aa11.71□□□□□ -0.53
HDLBP-208ENST00000422080 IFNA1P01562 189 aa11.71□□□□□ -0.53
HDLBP-208ENST00000422080 IGLC6P0CF74 106 aa11.71□□□□□ -0.53
HDLBP-208ENST00000422080 GNG4P50150 75 aa11.71□□□□□ -0.53
HDLBP-208ENST00000422080 PKIAP61925 76 aa11.71□□□□□ -0.53
HDLBP-208ENST00000422080 TMEM97Q5BJF2 176 aa11.71□□□□□ -0.53
HDLBP-208ENST00000422080 OR2D3Q8NGH3 330 aa11.71□□□□□ -0.53
HDLBP-208ENST00000422080 FAM30AQ9NZY2 134 aa11.71□□□□□ -0.53
HDLBP-208ENST00000422080 VAX2Q9UIW0 290 aa11.71□□□□□ -0.53
HDLBP-208ENST00000422080 FAM229AH3BQW9 127 aa11.7□□□□□ -0.54
HDLBP-208ENST00000422080 FER1L6-AS1Q8NA97 138 aa11.7□□□□□ -0.54
HDLBP-208ENST00000422080 BIN3Q9NQY0 253 aa11.7□□□□□ -0.54
HDLBP-208ENST00000422080 XKRY2A2RUG3 117 aa11.69□□□□□ -0.54
HDLBP-208ENST00000422080 GZMBP10144 247 aa11.69□□□□□ -0.54
HDLBP-208ENST00000422080 BCL2P10415 239 aa11.69□□□□□ -0.54
HDLBP-208ENST00000422080 TAGLN2P37802 199 aaKnown RBP11.69□□□□□ -0.54
HDLBP-208ENST00000422080 CACNG7P62955 275 aa11.69□□□□□ -0.54
HDLBP-208ENST00000422080 HAMPP81172 84 aa11.69□□□□□ -0.54
HDLBP-208ENST00000422080 MED9Q9NWA0 146 aa11.69□□□□□ -0.54
HDLBP-208ENST00000422080 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-208ENST00000422080 F2Z2F3 143 aa11.68□□□□□ -0.54
HDLBP-208ENST00000422080 P01737 135 aa11.68□□□□□ -0.54
HDLBP-208ENST00000422080 CHCHD5Q9BSY4 110 aa11.68□□□□□ -0.54
HDLBP-208ENST00000422080 TPPP3Q9BW30 176 aa11.68□□□□□ -0.54
HDLBP-208ENST00000422080 M0QY20 66 aa11.67□□□□□ -0.54
HDLBP-208ENST00000422080 ENHOQ6UWT2 76 aa11.67□□□□□ -0.54
HDLBP-208ENST00000422080 Q6ZSA8 131 aa11.67□□□□□ -0.54
HDLBP-208ENST00000422080 NTM-AS1Q6ZSK4 140 aa11.67□□□□□ -0.54
HDLBP-208ENST00000422080 TRBV20OR9-2A0A075B6H5 130 aa11.66□□□□□ -0.54
HDLBP-208ENST00000422080 H7C1H1 209 aa11.66□□□□□ -0.54
HDLBP-208ENST00000422080 MPV17L2Q567V2 206 aa11.66□□□□□ -0.54
HDLBP-208ENST00000422080 Q6ZNX1 250 aa11.66□□□□□ -0.54
HDLBP-208ENST00000422080 C15orf54Q8N8G6 183 aa11.66□□□□□ -0.54
HDLBP-208ENST00000422080 C1orf43Q9BWL3 253 aa11.66□□□□□ -0.54
HDLBP-208ENST00000422080 CRPP02741 224 aa11.65□□□□□ -0.54
HDLBP-208ENST00000422080 WDR73Q6P4I2 378 aa11.65□□□□□ -0.54
HDLBP-208ENST00000422080 ANGP03950 147 aaKnown RBP11.64□□□□□ -0.55
HDLBP-208ENST00000422080 MGPP08493 103 aa11.64□□□□□ -0.55
HDLBP-208ENST00000422080 C14orf177Q52M58 125 aa11.64□□□□□ -0.55
HDLBP-208ENST00000422080 C9orf62Q8N4C0 152 aa11.64□□□□□ -0.55
HDLBP-208ENST00000422080 TRBV25-1A0A075B6N4 114 aa11.63□□□□□ -0.55
HDLBP-208ENST00000422080 TRGC1P0CF51 173 aa11.63□□□□□ -0.55
HDLBP-208ENST00000422080 MIAQ16674 131 aa11.63□□□□□ -0.55
HDLBP-208ENST00000422080 IQCJQ1A5X6 159 aa11.63□□□□□ -0.55
HDLBP-208ENST00000422080 SUMO4Q6EEV6 95 aa11.63□□□□□ -0.55
HDLBP-208ENST00000422080 LYZL1Q6UWQ5 148 aa11.63□□□□□ -0.55
HDLBP-208ENST00000422080 NUDT10Q8NFP7 164 aa11.63□□□□□ -0.55
HDLBP-208ENST00000422080 NUDT11Q96G61 164 aa11.63□□□□□ -0.55
HDLBP-208ENST00000422080 SRRM2Q9UQ35 2752 aaKnown RBP11.63□□□□□ -0.55
HDLBP-208ENST00000422080 RBX1P62877 108 aa11.62□□□□□ -0.55
HDLBP-208ENST00000422080 GAGE6Q13070 117 aa11.62□□□□□ -0.55
HDLBP-208ENST00000422080 PRR34Q9NV39 138 aa11.62□□□□□ -0.55
HDLBP-208ENST00000422080 IGHV1-24A0A0C4DH33 117 aa11.61□□□□□ -0.55
HDLBP-208ENST00000422080 NTF3P20783 257 aa11.61□□□□□ -0.55
HDLBP-208ENST00000422080 RASL11AQ6T310 242 aa11.61□□□□□ -0.55
HDLBP-208ENST00000422080 DPH3P1Q9H4G8 78 aa11.61□□□□□ -0.55
HDLBP-208ENST00000422080 CTRLP40313 264 aa11.6□□□□□ -0.55
HDLBP-208ENST00000422080 LINC01620Q4KN68 170 aa11.6□□□□□ -0.55
HDLBP-208ENST00000422080 AKAP14Q86UN6 197 aa11.6□□□□□ -0.55
HDLBP-208ENST00000422080 OCC1Q8TAD7 63 aa11.6□□□□□ -0.55
HDLBP-208ENST00000422080 CNFNQ9BYD5 112 aa11.6□□□□□ -0.55
HDLBP-208ENST00000422080 NKX2-5P52952 324 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-208ENST00000422080 BLOC1S1P78537 153 aa11.59□□□□□ -0.55
HDLBP-208ENST00000422080 LINC00269Q8N2A0 174 aa11.59□□□□□ -0.55
HDLBP-208ENST00000422080 RPP21Q9H633 154 aaKnown RBP11.59□□□□□ -0.55
HDLBP-208ENST00000422080 NIT2Q9NQR4 276 aa11.59□□□□□ -0.55
HDLBP-208ENST00000422080 RNASE7Q9H1E1 156 aaKnown RBP11.58□□□□□ -0.56
HDLBP-208ENST00000422080 HERC1Q15751 4861 aa11.58□□□□□ -0.56
HDLBP-208ENST00000422080 MYCBP2O75592 4640 aa11.57□□□□□ -0.56
HDLBP-208ENST00000422080 TMEM250H0YL14 139 aa11.57□□□□□ -0.56
HDLBP-208ENST00000422080 K7EN84 100 aa11.57□□□□□ -0.56
HDLBP-208ENST00000422080 PLA2G1BP04054 148 aaKnown RBP11.57□□□□□ -0.56
HDLBP-208ENST00000422080 TWIST1Q15672 202 aa11.57□□□□□ -0.56
HDLBP-208ENST00000422080 PGLYRP4Q96LB8 373 aa11.57□□□□□ -0.56
HDLBP-208ENST00000422080 TMEM243Q9BU79 118 aa11.57□□□□□ -0.56
HDLBP-208ENST00000422080 CHAC1Q9BUX1 264 aa11.57□□□□□ -0.56
HDLBP-208ENST00000422080 A0A1B0GUV1 79 aa11.56□□□□□ -0.56
HDLBP-208ENST00000422080 USP17L23D6RBM5 183 aa11.56□□□□□ -0.56
HDLBP-208ENST00000422080 KRTAP26-1Q6PEX3 210 aa11.56□□□□□ -0.56
HDLBP-208ENST00000422080 SCXQ7RTU7 201 aa11.56□□□□□ -0.56
HDLBP-208ENST00000422080 LINC00528Q8N1L1 170 aa11.56□□□□□ -0.56
HDLBP-208ENST00000422080 LYPD6BQ8NI32 183 aa11.56□□□□□ -0.56
HDLBP-208ENST00000422080 HLA-DQA1P01909 254 aa11.55□□□□□ -0.56
HDLBP-208ENST00000422080 ALKAL2Q6UX46 152 aa11.55□□□□□ -0.56
HDLBP-208ENST00000422080 TRAV8-4A0A0B4J246 113 aa11.54□□□□□ -0.56
HDLBP-208ENST00000422080 REG3AQ06141 175 aa11.54□□□□□ -0.56
HDLBP-208ENST00000422080 DGAT2L7PQ6IED9 249 aa11.54□□□□□ -0.56
HDLBP-208ENST00000422080 CLPSL2Q6UWE3 100 aa11.54□□□□□ -0.56
HDLBP-208ENST00000422080 C20orf203Q8NBC4 194 aa11.54□□□□□ -0.56
HDLBP-208ENST00000422080 GTSF1Q8WW33 167 aa11.54□□□□□ -0.56
HDLBP-208ENST00000422080 PRSS1P07477 247 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms