RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 FAM92AA1XBS5 289 aa0.03□□□□□ -2.4
LINC00397-201ENST00000422074 UBE2G1P62253 170 aa0.03□□□□□ -2.4
LINC00397-201ENST00000422074 SCIMPQ6UWF3 145 aa0.03□□□□□ -2.4
LINC00397-201ENST00000422074 TPT1P8Q9HAU6 139 aa0.03□□□□□ -2.4
LINC00397-201ENST00000422074 UNC79Q9P2D8 2635 aa0.03□□□□□ -2.4
LINC00397-201ENST00000422074 SIPA1L3O60292 1781 aaPredicted RBP0.03□□□□□ -2.4
LINC00397-201ENST00000422074 MACF1Q9UPN3 7388 aaKnown RBP0.03□□□□□ -2.41
LINC00397-201ENST00000422074 HRNRQ86YZ3 2850 aaPredicted RBP0.02□□□□□ -2.41
LINC00397-201ENST00000422074 APOC4-APOC2K7ER74 178 aa0.02□□□□□ -2.41
LINC00397-201ENST00000422074 UBE2D1P51668 147 aa0.02□□□□□ -2.41
LINC00397-201ENST00000422074 SPTSSBQ8NFR3 76 aa0.02□□□□□ -2.41
LINC00397-201ENST00000422074 MAFIPQ8WZ33 124 aa0.02□□□□□ -2.41
LINC00397-201ENST00000422074 AKAP11Q9UKA4 1901 aa0.02□□□□□ -2.41
LINC00397-201ENST00000422074 IBTKQ9P2D0 1353 aaPredicted RBP0.02□□□□□ -2.41
LINC00397-201ENST00000422074 GOLGA3Q08378 1498 aa0.02□□□□□ -2.41
LINC00397-201ENST00000422074 F5P12259 2224 aa0.02□□□□□ -2.41
LINC00397-201ENST00000422074 HIVEP3Q5T1R4 2406 aa0.02□□□□□ -2.41
LINC00397-201ENST00000422074 POLQO75417 2590 aa0.01□□□□□ -2.41
LINC00397-201ENST00000422074 NPFFO15130 113 aa0.01□□□□□ -2.41
LINC00397-201ENST00000422074 GUCA1AP43080 201 aaPredicted RBP0.01□□□□□ -2.41
LINC00397-201ENST00000422074 SMIM21Q3B7S5 101 aa0.01□□□□□ -2.41
LINC00397-201ENST00000422074 S100A7L2Q5SY68 101 aa0.01□□□□□ -2.41
LINC00397-201ENST00000422074 NSD1Q96L73 2696 aaPredicted RBP0.01□□□□□ -2.41
LINC00397-201ENST00000422074 LRRC37A3O60309 1634 aa0.01□□□□□ -2.41
LINC00397-201ENST00000422074 SPEF2Q9C093 1822 aa0.01□□□□□ -2.41
LINC00397-201ENST00000422074 ABCA2Q9BZC7 2435 aa0.01□□□□□ -2.41
LINC00397-201ENST00000422074 NDUFB6O95139 128 aa0□□□□□ -2.41
LINC00397-201ENST00000422074 CFDP00746 253 aaPredicted RBP0□□□□□ -2.41
LINC00397-201ENST00000422074 CBLN1P23435 193 aa0□□□□□ -2.41
LINC00397-201ENST00000422074 CADP27708 2225 aa0□□□□□ -2.41
LINC00397-201ENST00000422074 COPZ1P61923 177 aa0□□□□□ -2.41
LINC00397-201ENST00000422074 KCNRGQ8N5I3 272 aa0□□□□□ -2.41
LINC00397-201ENST00000422074 ANP32BQ92688 251 aaKnown RBP0□□□□□ -2.41
LINC00397-201ENST00000422074 TCEAL4Q96EI5 215 aa0□□□□□ -2.41
LINC00397-201ENST00000422074 MED13LQ71F56 2210 aa-0.01□□□□□ -2.41
LINC00397-201ENST00000422074 NWD2Q9ULI1 1742 aa-0.01□□□□□ -2.41
LINC00397-201ENST00000422074 ZNF815PA8K554 130 aa-0.01□□□□□ -2.41
LINC00397-201ENST00000422074 PITX3O75364 302 aa-0.01□□□□□ -2.41
LINC00397-201ENST00000422074 ZNF818PQ6ZRF7 136 aa-0.01□□□□□ -2.41
LINC00397-201ENST00000422074 SSBP3-AS1Q7Z2R9 100 aa-0.01□□□□□ -2.41
LINC00397-201ENST00000422074 LRP1Q07954 4544 aaKnown RBP-0.01□□□□□ -2.41
LINC00397-201ENST00000422074 MYH6P13533 1939 aa-0.01□□□□□ -2.41
LINC00397-201ENST00000422074 IFT172Q9UG01 1749 aa-0.01□□□□□ -2.41
LINC00397-201ENST00000422074 MYOM3Q5VTT5 1437 aa-0.02□□□□□ -2.41
LINC00397-201ENST00000422074 FLNCQ14315 2725 aa-0.02□□□□□ -2.41
LINC00397-201ENST00000422074 ANK2Q01484 3957 aa-0.02□□□□□ -2.41
LINC00397-201ENST00000422074 TRBV10-3A0A0K0K1G6 114 aa-0.02□□□□□ -2.41
LINC00397-201ENST00000422074 RPS25P62851 125 aaKnown RBP-0.02□□□□□ -2.41
LINC00397-201ENST00000422074 SMCO1Q147U7 214 aa-0.02□□□□□ -2.41
LINC00397-201ENST00000422074 WFDC6Q9BQY6 131 aa-0.02□□□□□ -2.41
LINC00397-201ENST00000422074 SEC11CQ9BY50 192 aa-0.02□□□□□ -2.41
LINC00397-201ENST00000422074 NCOR1O75376 2440 aa-0.02□□□□□ -2.41
LINC00397-201ENST00000422074 CELSR1Q9NYQ6 3014 aa-0.02□□□□□ -2.41
LINC00397-201ENST00000422074 WNK2Q9Y3S1 2297 aa-0.02□□□□□ -2.41
LINC00397-201ENST00000422074 A0A0D9SFI3 127 aa-0.03□□□□□ -2.41
LINC00397-201ENST00000422074 ALX1Q15699 326 aa-0.03□□□□□ -2.41
LINC00397-201ENST00000422074 BAGE3Q86Y29 109 aa-0.03□□□□□ -2.41
LINC00397-201ENST00000422074 PFDN5Q99471 154 aa-0.03□□□□□ -2.41
LINC00397-201ENST00000422074 NPVFQ9HCQ7 196 aa-0.03□□□□□ -2.41
LINC00397-201ENST00000422074 PRO0255Q9UI72 69 aa-0.03□□□□□ -2.41
LINC00397-201ENST00000422074 DOPEY2Q9Y3R5 2298 aa-0.03□□□□□ -2.41
LINC00397-201ENST00000422074 FAM208BQ5VWN6 2430 aa-0.04□□□□□ -2.42
LINC00397-201ENST00000422074 PIGBOS1A0A0B4J2F0 54 aa-0.04□□□□□ -2.42
LINC00397-201ENST00000422074 CLPSL1A2RUU4 121 aa-0.04□□□□□ -2.42
LINC00397-201ENST00000422074 G3V318 75 aa-0.04□□□□□ -2.42
LINC00397-201ENST00000422074 PIN1P1O15428 100 aa-0.04□□□□□ -2.42
LINC00397-201ENST00000422074 SPINK8P0C7L1 97 aa-0.04□□□□□ -2.42
LINC00397-201ENST00000422074 TMEM191AQ9H0A3 160 aa-0.04□□□□□ -2.42
LINC00397-201ENST00000422074 LINC00312Q9Y6C7 94 aa-0.04□□□□□ -2.42
LINC00397-201ENST00000422074 PTPN13Q12923 2485 aa-0.04□□□□□ -2.42
LINC00397-201ENST00000422074 CELSR2Q9HCU4 2923 aa-0.04□□□□□ -2.42
LINC00397-201ENST00000422074 CASKIN1Q8WXD9 1431 aa-0.04□□□□□ -2.42
LINC00397-201ENST00000422074 C10orf142B7Z368 130 aa-0.05□□□□□ -2.42
LINC00397-201ENST00000422074 CCL8P80075 99 aa-0.05□□□□□ -2.42
LINC00397-201ENST00000422074 CFAP126Q5VTH2 177 aa-0.05□□□□□ -2.42
LINC00397-201ENST00000422074 CNFNQ9BYD5 112 aa-0.05□□□□□ -2.42
LINC00397-201ENST00000422074 CCDC167Q9P0B6 97 aa-0.05□□□□□ -2.42
LINC00397-201ENST00000422074 ZNF518AQ6AHZ1 1483 aa-0.05□□□□□ -2.42
LINC00397-201ENST00000422074 FLNAP21333 2647 aaKnown RBP-0.05□□□□□ -2.42
LINC00397-201ENST00000422074 ZNF609O15014 1411 aa-0.05□□□□□ -2.42
LINC00397-201ENST00000422074 BIVM-ERCC5R4GMW8 1640 aa-0.05□□□□□ -2.42
LINC00397-201ENST00000422074 CHD9Q3L8U1 2897 aa-0.06□□□□□ -2.42
LINC00397-201ENST00000422074 SPTBN2O15020 2390 aa-0.06□□□□□ -2.42
LINC00397-201ENST00000422074 DOCK11Q5JSL3 2073 aa-0.06□□□□□ -2.42
LINC00397-201ENST00000422074 AKAP6Q13023 2319 aa-0.07□□□□□ -2.42
LINC00397-201ENST00000422074 ZMYM4Q5VZL5 1548 aa-0.07□□□□□ -2.42
LINC00397-201ENST00000422074 KIAA0100Q14667 2235 aaKnown RBP-0.07□□□□□ -2.42
LINC00397-201ENST00000422074 M0R3E3 92 aa-0.07□□□□□ -2.42
LINC00397-201ENST00000422074 Q5VV11 94 aa-0.07□□□□□ -2.42
LINC00397-201ENST00000422074 COPS9Q8WXC6 57 aa-0.07□□□□□ -2.42
LINC00397-201ENST00000422074 AQP10Q96PS8 301 aa-0.07□□□□□ -2.42
LINC00397-201ENST00000422074 PDCD10Q9BUL8 212 aa-0.07□□□□□ -2.42
LINC00397-201ENST00000422074 CYP4F30PQ9H0H9 118 aa-0.07□□□□□ -2.42
LINC00397-201ENST00000422074 SCN3BQ9NY72 215 aa-0.07□□□□□ -2.42
LINC00397-201ENST00000422074 NHSL1Q5SYE7 1610 aa-0.07□□□□□ -2.42
LINC00397-201ENST00000422074 MYH9P35579 1960 aaKnown RBP-0.07□□□□□ -2.42
LINC00397-201ENST00000422074 PTPRQQ9UMZ3 2332 aa-0.07□□□□□ -2.42
LINC00397-201ENST00000422074 IFT140Q96RY7 1462 aa-0.08□□□□□ -2.42
LINC00397-201ENST00000422074 TRAV22A0A0B4J277 110 aa-0.08□□□□□ -2.42
LINC00397-201ENST00000422074 PAIP2BQ9ULR5 123 aaKnown RBP-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms