RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 COX11Q9Y6N1 276 aa9.95□□□□□ -0.82
FAM3A-209ENST00000421517 TRBV6-8A0A0A6YYG3 113 aa9.94□□□□□ -0.82
FAM3A-209ENST00000421517 M0QY20 66 aa9.94□□□□□ -0.82
FAM3A-209ENST00000421517 CDK2AP2O75956 126 aa9.94□□□□□ -0.82
FAM3A-209ENST00000421517 ELOBQ15370 118 aa9.94□□□□□ -0.82
FAM3A-209ENST00000421517 LINC01551Q86U37 167 aa9.94□□□□□ -0.82
FAM3A-209ENST00000421517 NIT1Q86X76 327 aa9.94□□□□□ -0.82
FAM3A-209ENST00000421517 SMIM7Q9BQ49 75 aa9.94□□□□□ -0.82
FAM3A-209ENST00000421517 TM2D2Q9BX73 214 aa9.94□□□□□ -0.82
FAM3A-209ENST00000421517 GFRA4Q9GZZ7 299 aa9.94□□□□□ -0.82
FAM3A-209ENST00000421517 RNASE7Q9H1E1 156 aaKnown RBP9.94□□□□□ -0.82
FAM3A-209ENST00000421517 DPH3P1Q9H4G8 78 aa9.94□□□□□ -0.82
FAM3A-209ENST00000421517 A0A087WTM6 91 aa9.93□□□□□ -0.82
FAM3A-209ENST00000421517 C16orf90A8MZG2 172 aa9.93□□□□□ -0.82
FAM3A-209ENST00000421517 F5H697 171 aa9.93□□□□□ -0.82
FAM3A-209ENST00000421517 GATCO43716 136 aaKnown RBP9.93□□□□□ -0.82
FAM3A-209ENST00000421517 SPATA12Q7Z6I5 190 aa9.93□□□□□ -0.82
FAM3A-209ENST00000421517 TPPP3Q9BW30 176 aa9.93□□□□□ -0.82
FAM3A-209ENST00000421517 TNFRSF18Q9Y5U5 241 aa9.93□□□□□ -0.82
FAM3A-209ENST00000421517 URGCP-MRPS24S4R325 110 aa9.93□□□□□ -0.82
FAM3A-209ENST00000421517 DNAH5Q8TE73 4624 aa9.92□□□□□ -0.82
FAM3A-209ENST00000421517 MUC21A0A0G2JKD1 596 aa9.92□□□□□ -0.82
FAM3A-209ENST00000421517 MUC21A0A140T8X8 626 aa9.92□□□□□ -0.82
FAM3A-209ENST00000421517 ZNF727A8MUV8 499 aa9.92□□□□□ -0.82
FAM3A-209ENST00000421517 OSTCQ9NRP0 149 aa9.92□□□□□ -0.82
FAM3A-209ENST00000421517 PEA15Q15121 130 aa9.91□□□□□ -0.82
FAM3A-209ENST00000421517 KCNIP4Q6PIL6 250 aa9.91□□□□□ -0.82
FAM3A-209ENST00000421517 GTSF1Q8WW33 167 aa9.91□□□□□ -0.82
FAM3A-209ENST00000421517 A0A087WX48 190 aa9.9□□□□□ -0.82
FAM3A-209ENST00000421517 IGHV3-30P01768 117 aa9.9□□□□□ -0.82
FAM3A-209ENST00000421517 IGHV3-33P01772 117 aa9.9□□□□□ -0.82
FAM3A-209ENST00000421517 IGHV3-30-3P0DP02 117 aa9.9□□□□□ -0.82
FAM3A-209ENST00000421517 IGHV3-30-5P0DP03 117 aa9.9□□□□□ -0.82
FAM3A-209ENST00000421517 TWIST1Q15672 202 aa9.9□□□□□ -0.82
FAM3A-209ENST00000421517 RASL11AQ6T310 242 aa9.9□□□□□ -0.82
FAM3A-209ENST00000421517 SMIM15Q7Z3B0 74 aa9.9□□□□□ -0.82
FAM3A-209ENST00000421517 NTN5Q8WTR8 489 aaPredicted RBP9.9□□□□□ -0.82
FAM3A-209ENST00000421517 TSKUQ8WUA8 353 aa9.9□□□□□ -0.82
FAM3A-209ENST00000421517 RMI2Q96E14 147 aa9.9□□□□□ -0.82
FAM3A-209ENST00000421517 PGLYRP4Q96LB8 373 aa9.9□□□□□ -0.82
FAM3A-209ENST00000421517 NIT2Q9NQR4 276 aa9.9□□□□□ -0.82
FAM3A-209ENST00000421517 RYR1P21817 5038 aa9.89□□□□□ -0.83
FAM3A-209ENST00000421517 LRCOL1A6NCL2 159 aa9.89□□□□□ -0.83
FAM3A-209ENST00000421517 PSCAO43653 123 aa9.89□□□□□ -0.83
FAM3A-209ENST00000421517 KRTAP10-2P60368 255 aa9.89□□□□□ -0.83
FAM3A-209ENST00000421517 Q0VG73 95 aa9.89□□□□□ -0.83
FAM3A-209ENST00000421517 IQCJQ1A5X6 159 aa9.89□□□□□ -0.83
FAM3A-209ENST00000421517 TMEM241Q24JQ0 296 aa9.89□□□□□ -0.83
FAM3A-209ENST00000421517 SUMO4Q6EEV6 95 aa9.89□□□□□ -0.83
FAM3A-209ENST00000421517 ATRAIDQ6UW56 229 aa9.89□□□□□ -0.83
FAM3A-209ENST00000421517 CEBPGP53567 150 aa9.88□□□□□ -0.83
FAM3A-209ENST00000421517 SSTP61278 116 aa9.88□□□□□ -0.83
FAM3A-209ENST00000421517 C15orf54Q8N8G6 183 aa9.88□□□□□ -0.83
FAM3A-209ENST00000421517 TRBV25-1A0A075B6N4 114 aa9.87□□□□□ -0.83
FAM3A-209ENST00000421517 MGPP08493 103 aa9.87□□□□□ -0.83
FAM3A-209ENST00000421517 NTM-AS1Q6ZSK4 140 aa9.87□□□□□ -0.83
FAM3A-209ENST00000421517 ISOC2Q96AB3 205 aa9.87□□□□□ -0.83
FAM3A-209ENST00000421517 BORCS7Q96B45 105 aa9.87□□□□□ -0.83
FAM3A-209ENST00000421517 NAT8Q9UHE5 227 aa9.87□□□□□ -0.83
FAM3A-209ENST00000421517 APOBP04114 4563 aaKnown RBP9.85□□□□□ -0.83
FAM3A-209ENST00000421517 IGHV1-24A0A0C4DH33 117 aa9.85□□□□□ -0.83
FAM3A-209ENST00000421517 A0A1B0GUT8 65 aa9.85□□□□□ -0.83
FAM3A-209ENST00000421517 HIGD1CA8MV81 97 aa9.85□□□□□ -0.83
FAM3A-209ENST00000421517 RPL23P62829 140 aaKnown RBP9.85□□□□□ -0.83
FAM3A-209ENST00000421517 TMEM191AQ9H0A3 160 aa9.85□□□□□ -0.83
FAM3A-209ENST00000421517 V9GYV3 84 aa9.85□□□□□ -0.83
FAM3A-209ENST00000421517 A0A1B0GUV1 79 aa9.84□□□□□ -0.83
FAM3A-209ENST00000421517 Q8N3U1 123 aa9.84□□□□□ -0.83
FAM3A-209ENST00000421517 Q8N814 137 aa9.84□□□□□ -0.83
FAM3A-209ENST00000421517 GATD1Q8NB37 220 aa9.84□□□□□ -0.83
FAM3A-209ENST00000421517 Q9HAA7 133 aa9.84□□□□□ -0.83
FAM3A-209ENST00000421517 PRR34Q9NV39 138 aa9.84□□□□□ -0.83
FAM3A-209ENST00000421517 KLK12Q9UKR0 248 aa9.84□□□□□ -0.83
FAM3A-209ENST00000421517 HSPG2P98160 4391 aa9.84□□□□□ -0.83
FAM3A-209ENST00000421517 TRBV6-5A0A0K0K1A5 114 aa9.83□□□□□ -0.84
FAM3A-209ENST00000421517 C9JQL5 133 aa9.83□□□□□ -0.84
FAM3A-209ENST00000421517 TMEM262E9PQX1 116 aa9.83□□□□□ -0.84
FAM3A-209ENST00000421517 NCR2O95944 276 aa9.83□□□□□ -0.84
FAM3A-209ENST00000421517 CHCHD5Q9BSY4 110 aa9.83□□□□□ -0.84
FAM3A-209ENST00000421517 RAB14P61106 215 aa9.82□□□□□ -0.84
FAM3A-209ENST00000421517 MIAQ16674 131 aa9.82□□□□□ -0.84
FAM3A-209ENST00000421517 MPV17L2Q567V2 206 aa9.82□□□□□ -0.84
FAM3A-209ENST00000421517 NAT8BQ9UHF3 227 aa9.82□□□□□ -0.84
FAM3A-209ENST00000421517 A0A1B0GW15 77 aa9.81□□□□□ -0.84
FAM3A-209ENST00000421517 H7C423 109 aa9.81□□□□□ -0.84
FAM3A-209ENST00000421517 SRSF3P84103 164 aaKnown RBP9.81□□□□□ -0.84
FAM3A-209ENST00000421517 RIGQ13278 110 aa9.81□□□□□ -0.84
FAM3A-209ENST00000421517 COTL1Q14019 142 aa9.81□□□□□ -0.84
FAM3A-209ENST00000421517 UBE2WQ96B02 151 aa9.81□□□□□ -0.84
FAM3A-209ENST00000421517 SMIM27A0A1W2PRY6 76 aa9.8□□□□□ -0.84
FAM3A-209ENST00000421517 PPP1R17O96001 155 aa9.8□□□□□ -0.84
FAM3A-209ENST00000421517 CRPP02741 224 aa9.8□□□□□ -0.84
FAM3A-209ENST00000421517 ENHOQ6UWT2 76 aa9.8□□□□□ -0.84
FAM3A-209ENST00000421517 Q8N976 141 aa9.8□□□□□ -0.84
FAM3A-209ENST00000421517 NUP35Q8NFH5 326 aa9.8□□□□□ -0.84
FAM3A-209ENST00000421517 MRAP2Q96G30 205 aa9.8□□□□□ -0.84
FAM3A-209ENST00000421517 TMEM243Q9BU79 118 aa9.8□□□□□ -0.84
FAM3A-209ENST00000421517 ANGP03950 147 aaKnown RBP9.79□□□□□ -0.84
FAM3A-209ENST00000421517 GCSHP23434 173 aa9.79□□□□□ -0.84
FAM3A-209ENST00000421517 RBX1P62877 108 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms