RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 SSTP61278 116 aa9.93□□□□□ -0.82
UBXN4-203ENST00000416538 TCTE3Q8IZS6 198 aa9.93□□□□□ -0.82
UBXN4-203ENST00000416538 FRZBQ92765 325 aa9.93□□□□□ -0.82
UBXN4-203ENST00000416538 MANBALQ9NQG1 85 aa9.93□□□□□ -0.82
UBXN4-203ENST00000416538 RAB19A4D1S5 217 aa9.92□□□□□ -0.82
UBXN4-203ENST00000416538 IGLC6P0CF74 106 aa9.92□□□□□ -0.82
UBXN4-203ENST00000416538 ATRAIDQ6UW56 229 aa9.92□□□□□ -0.82
UBXN4-203ENST00000416538 UBE2WQ96B02 151 aa9.92□□□□□ -0.82
UBXN4-203ENST00000416538 SRRM2Q9UQ35 2752 aaKnown RBP9.91□□□□□ -0.82
UBXN4-203ENST00000416538 IGKV2D-24A0A075B6R9 120 aa9.91□□□□□ -0.82
UBXN4-203ENST00000416538 TRBV6-8A0A0A6YYG3 113 aa9.91□□□□□ -0.82
UBXN4-203ENST00000416538 C19orf71A6NCJ1 209 aa9.91□□□□□ -0.82
UBXN4-203ENST00000416538 TEX46H3BTG2 121 aa9.91□□□□□ -0.82
UBXN4-203ENST00000416538 SULT1A2P50226 295 aa9.91□□□□□ -0.82
UBXN4-203ENST00000416538 MPV17L2Q567V2 206 aa9.91□□□□□ -0.82
UBXN4-203ENST00000416538 TOR2AQ5JU69 321 aa9.91□□□□□ -0.82
UBXN4-203ENST00000416538 SPANXN1Q5VSR9 72 aa9.91□□□□□ -0.82
UBXN4-203ENST00000416538 NTM-AS1Q6ZSK4 140 aa9.91□□□□□ -0.82
UBXN4-203ENST00000416538 URGCP-MRPS24S4R325 110 aa9.91□□□□□ -0.82
UBXN4-203ENST00000416538 Q6ZNX1 250 aa9.9□□□□□ -0.82
UBXN4-203ENST00000416538 CHCHD7Q9BUK0 85 aa9.9□□□□□ -0.82
UBXN4-203ENST00000416538 HERC1Q15751 4861 aa9.9□□□□□ -0.83
UBXN4-203ENST00000416538 A0A087WX48 190 aa9.89□□□□□ -0.83
UBXN4-203ENST00000416538 GHRHP01286 108 aa9.89□□□□□ -0.83
UBXN4-203ENST00000416538 C1QBP02746 253 aa9.89□□□□□ -0.83
UBXN4-203ENST00000416538 ENHOQ6UWT2 76 aa9.89□□□□□ -0.83
UBXN4-203ENST00000416538 AP1S3Q96PC3 154 aa9.89□□□□□ -0.83
UBXN4-203ENST00000416538 VAX2Q9UIW0 290 aa9.89□□□□□ -0.83
UBXN4-203ENST00000416538 MEF2BQ02080 365 aaPredicted RBP9.88□□□□□ -0.83
UBXN4-203ENST00000416538 SLC51BQ86UW2 128 aa9.88□□□□□ -0.83
UBXN4-203ENST00000416538 Q8N976 141 aa9.88□□□□□ -0.83
UBXN4-203ENST00000416538 OR2D3Q8NGH3 330 aa9.88□□□□□ -0.83
UBXN4-203ENST00000416538 F5H697 171 aa9.87□□□□□ -0.83
UBXN4-203ENST00000416538 BCL2P10415 239 aa9.87□□□□□ -0.83
UBXN4-203ENST00000416538 C15orf54Q8N8G6 183 aa9.87□□□□□ -0.83
UBXN4-203ENST00000416538 FER1L6-AS1Q8NA97 138 aa9.87□□□□□ -0.83
UBXN4-203ENST00000416538 TPPP3Q9BW30 176 aa9.87□□□□□ -0.83
UBXN4-203ENST00000416538 M0QY20 66 aa9.86□□□□□ -0.83
UBXN4-203ENST00000416538 GNG4P50150 75 aa9.86□□□□□ -0.83
UBXN4-203ENST00000416538 SUMO4Q6EEV6 95 aa9.86□□□□□ -0.83
UBXN4-203ENST00000416538 AKAP14Q86UN6 197 aa9.86□□□□□ -0.83
UBXN4-203ENST00000416538 RMI2Q96E14 147 aa9.86□□□□□ -0.83
UBXN4-203ENST00000416538 COX11Q9Y6N1 276 aa9.86□□□□□ -0.83
UBXN4-203ENST00000416538 TMEM262E9PQX1 116 aa9.85□□□□□ -0.83
UBXN4-203ENST00000416538 IFNA1P01562 189 aa9.85□□□□□ -0.83
UBXN4-203ENST00000416538 MGPP08493 103 aa9.85□□□□□ -0.83
UBXN4-203ENST00000416538 CLPSL2Q6UWE3 100 aa9.85□□□□□ -0.83
UBXN4-203ENST00000416538 SCXQ7RTU7 201 aa9.85□□□□□ -0.83
UBXN4-203ENST00000416538 CHCHD5Q9BSY4 110 aa9.85□□□□□ -0.83
UBXN4-203ENST00000416538 hCG_2014768A0A024R1R8 64 aa9.84□□□□□ -0.83
UBXN4-203ENST00000416538 KRTAP26-1Q6PEX3 210 aa9.84□□□□□ -0.83
UBXN4-203ENST00000416538 C9orf62Q8N4C0 152 aa9.84□□□□□ -0.83
UBXN4-203ENST00000416538 SMIM12Q96EX1 92 aa9.84□□□□□ -0.83
UBXN4-203ENST00000416538 MED9Q9NWA0 146 aa9.84□□□□□ -0.83
UBXN4-203ENST00000416538 FAM229AH3BQW9 127 aa9.83□□□□□ -0.84
UBXN4-203ENST00000416538 K7EN84 100 aa9.83□□□□□ -0.84
UBXN4-203ENST00000416538 PDE6DO43924 150 aa9.83□□□□□ -0.84
UBXN4-203ENST00000416538 ANGP03950 147 aaKnown RBP9.83□□□□□ -0.84
UBXN4-203ENST00000416538 CTRLP40313 264 aa9.83□□□□□ -0.84
UBXN4-203ENST00000416538 RBX1P62877 108 aa9.83□□□□□ -0.84
UBXN4-203ENST00000416538 GAGE6Q13070 117 aa9.83□□□□□ -0.84
UBXN4-203ENST00000416538 ELOBQ15370 118 aa9.83□□□□□ -0.84
UBXN4-203ENST00000416538 LYZL1Q6UWQ5 148 aa9.83□□□□□ -0.84
UBXN4-203ENST00000416538 DAZAP1Q96EP5 407 aaKnown RBP9.83□□□□□ -0.84
UBXN4-203ENST00000416538 C1orf43Q9BWL3 253 aa9.83□□□□□ -0.84
UBXN4-203ENST00000416538 P01737 135 aa9.82□□□□□ -0.84
UBXN4-203ENST00000416538 CRPP02741 224 aa9.82□□□□□ -0.84
UBXN4-203ENST00000416538 SMIM17P0DL12 118 aa9.82□□□□□ -0.84
UBXN4-203ENST00000416538 RPS20P60866 119 aaKnown RBP9.82□□□□□ -0.84
UBXN4-203ENST00000416538 Q0VG73 95 aa9.82□□□□□ -0.84
UBXN4-203ENST00000416538 IQCJQ1A5X6 159 aa9.82□□□□□ -0.84
UBXN4-203ENST00000416538 DEFB104AQ8WTQ1 72 aa9.82□□□□□ -0.84
UBXN4-203ENST00000416538 PRR34Q9NV39 138 aa9.82□□□□□ -0.84
UBXN4-203ENST00000416538 USP17L23D6RBM5 183 aa9.81□□□□□ -0.84
UBXN4-203ENST00000416538 HLA-DQA1P01909 254 aa9.81□□□□□ -0.84
UBXN4-203ENST00000416538 NKX2-5P52952 324 aaPredicted RBP9.81□□□□□ -0.84
UBXN4-203ENST00000416538 KRTAP10-4P60372 401 aaPredicted RBP9.81□□□□□ -0.84
UBXN4-203ENST00000416538 CACNG7P62955 275 aa9.81□□□□□ -0.84
UBXN4-203ENST00000416538 KCNIP4Q6PIL6 250 aa9.81□□□□□ -0.84
UBXN4-203ENST00000416538 NUDT10Q8NFP7 164 aa9.81□□□□□ -0.84
UBXN4-203ENST00000416538 NUDT11Q96G61 164 aa9.81□□□□□ -0.84
UBXN4-203ENST00000416538 GFRA4Q9GZZ7 299 aa9.81□□□□□ -0.84
UBXN4-203ENST00000416538 TRBV25-1A0A075B6N4 114 aa9.8□□□□□ -0.84
UBXN4-203ENST00000416538 TAGLN2P37802 199 aaKnown RBP9.8□□□□□ -0.84
UBXN4-203ENST00000416538 RNASE7Q9H1E1 156 aaKnown RBP9.8□□□□□ -0.84
UBXN4-203ENST00000416538 NTF3P20783 257 aa9.79□□□□□ -0.84
UBXN4-203ENST00000416538 MIAQ16674 131 aa9.79□□□□□ -0.84
UBXN4-203ENST00000416538 TMEM97Q5BJF2 176 aa9.79□□□□□ -0.84
UBXN4-203ENST00000416538 LINC00269Q8N2A0 174 aa9.79□□□□□ -0.84
UBXN4-203ENST00000416538 C20orf203Q8NBC4 194 aa9.79□□□□□ -0.84
UBXN4-203ENST00000416538 CNFNQ9BYD5 112 aa9.79□□□□□ -0.84
UBXN4-203ENST00000416538 BIN3Q9NQY0 253 aa9.79□□□□□ -0.84
UBXN4-203ENST00000416538 IGLV4-60A0A075B6I1 120 aa9.78□□□□□ -0.84
UBXN4-203ENST00000416538 IGHV1-24A0A0C4DH33 117 aa9.78□□□□□ -0.84
UBXN4-203ENST00000416538 F2Z2F3 143 aa9.78□□□□□ -0.84
UBXN4-203ENST00000416538 PRSS1P07477 247 aa9.78□□□□□ -0.84
UBXN4-203ENST00000416538 RASL11AQ6T310 242 aa9.78□□□□□ -0.84
UBXN4-203ENST00000416538 ALKAL2Q6UX46 152 aa9.78□□□□□ -0.84
UBXN4-203ENST00000416538 OCC1Q8TAD7 63 aa9.78□□□□□ -0.84
UBXN4-203ENST00000416538 CIRBP-AS1Q8TBR5 109 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms