RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 URGCP-MRPS24S4R325 110 aa17.49■□□□□ 0.39
VEGFA-207ENST00000413642 TRAV8-3A0A0A6YYJ7 113 aa17.48■□□□□ 0.39
VEGFA-207ENST00000413642 MGPP08493 103 aa17.48■□□□□ 0.39
VEGFA-207ENST00000413642 LYPD6BQ8NI32 183 aa17.48■□□□□ 0.39
VEGFA-207ENST00000413642 TM2D2Q9BX73 214 aa17.48■□□□□ 0.39
VEGFA-207ENST00000413642 RNASE7Q9H1E1 156 aaKnown RBP17.48■□□□□ 0.39
VEGFA-207ENST00000413642 BIN3Q9NQY0 253 aa17.48■□□□□ 0.39
VEGFA-207ENST00000413642 TRBV6-8A0A0A6YYG3 113 aa17.47■□□□□ 0.39
VEGFA-207ENST00000413642 CACNG7P62955 275 aa17.47■□□□□ 0.39
VEGFA-207ENST00000413642 Q8N814 137 aa17.47■□□□□ 0.39
VEGFA-207ENST00000413642 XKRY2A2RUG3 117 aa17.46■□□□□ 0.39
VEGFA-207ENST00000413642 Q8N1X5 172 aa17.46■□□□□ 0.39
VEGFA-207ENST00000413642 A0A087WX48 190 aa17.45■□□□□ 0.38
VEGFA-207ENST00000413642 IGLV5-52A0A0A0MRZ9 124 aa17.45■□□□□ 0.38
VEGFA-207ENST00000413642 LECT2O14960 151 aa17.45■□□□□ 0.38
VEGFA-207ENST00000413642 GCSHP23434 173 aa17.45■□□□□ 0.38
VEGFA-207ENST00000413642 XGP55808 180 aa17.45■□□□□ 0.38
VEGFA-207ENST00000413642 TOR2AQ5JU69 321 aa17.45■□□□□ 0.38
VEGFA-207ENST00000413642 NTM-AS1Q6ZSK4 140 aa17.45■□□□□ 0.38
VEGFA-207ENST00000413642 TMEM262E9PQX1 116 aa17.44■□□□□ 0.38
VEGFA-207ENST00000413642 F2Z2F3 143 aa17.44■□□□□ 0.38
VEGFA-207ENST00000413642 M0QY20 66 aa17.44■□□□□ 0.38
VEGFA-207ENST00000413642 SUMO4Q6EEV6 95 aa17.44■□□□□ 0.38
VEGFA-207ENST00000413642 NTF3P20783 257 aa17.43■□□□□ 0.38
VEGFA-207ENST00000413642 UBE2WQ96B02 151 aa17.43■□□□□ 0.38
VEGFA-207ENST00000413642 RPP21Q9H633 154 aaKnown RBP17.43■□□□□ 0.38
VEGFA-207ENST00000413642 TMEM250H0YL14 139 aa17.42■□□□□ 0.38
VEGFA-207ENST00000413642 CEBPGP53567 150 aa17.42■□□□□ 0.38
VEGFA-207ENST00000413642 BAALCQ8WXS3 180 aa17.42■□□□□ 0.38
VEGFA-207ENST00000413642 CTRLP40313 264 aa17.41■□□□□ 0.38
VEGFA-207ENST00000413642 CHCHD5Q9BSY4 110 aa17.41■□□□□ 0.38
VEGFA-207ENST00000413642 CHCHD7Q9BUK0 85 aa17.41■□□□□ 0.38
VEGFA-207ENST00000413642 IGKV2D-24A0A075B6R9 120 aa17.4■□□□□ 0.38
VEGFA-207ENST00000413642 MPV17L2Q567V2 206 aa17.4■□□□□ 0.38
VEGFA-207ENST00000413642 KCNIP4Q6PIL6 250 aa17.4■□□□□ 0.38
VEGFA-207ENST00000413642 NTN5Q8WTR8 489 aaPredicted RBP17.4■□□□□ 0.38
VEGFA-207ENST00000413642 GTSF1Q8WW33 167 aa17.39■□□□□ 0.37
VEGFA-207ENST00000413642 TRGC1P0CF51 173 aa17.38■□□□□ 0.37
VEGFA-207ENST00000413642 HAMPP81172 84 aa17.38■□□□□ 0.37
VEGFA-207ENST00000413642 ELOBQ15370 118 aa17.38■□□□□ 0.37
VEGFA-207ENST00000413642 C15orf54Q8N8G6 183 aa17.38■□□□□ 0.37
VEGFA-207ENST00000413642 Q8N976 141 aa17.38■□□□□ 0.37
VEGFA-207ENST00000413642 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.38■□□□□ 0.37
VEGFA-207ENST00000413642 TWIST1Q15672 202 aa17.37■□□□□ 0.37
VEGFA-207ENST00000413642 WDR73Q6P4I2 378 aa17.37■□□□□ 0.37
VEGFA-207ENST00000413642 ENHOQ6UWT2 76 aa17.37■□□□□ 0.37
VEGFA-207ENST00000413642 DEFB104AQ8WTQ1 72 aa17.37■□□□□ 0.37
VEGFA-207ENST00000413642 EIF5A2Q9GZV4 153 aaKnown RBP17.37■□□□□ 0.37
VEGFA-207ENST00000413642 DPH3P1Q9H4G8 78 aa17.37■□□□□ 0.37
VEGFA-207ENST00000413642 GAGE6Q13070 117 aa17.36■□□□□ 0.37
VEGFA-207ENST00000413642 ATRAIDQ6UW56 229 aa17.36■□□□□ 0.37
VEGFA-207ENST00000413642 RMI2Q96E14 147 aa17.36■□□□□ 0.37
VEGFA-207ENST00000413642 H7C1H1 209 aa17.35■□□□□ 0.37
VEGFA-207ENST00000413642 GATCO43716 136 aaKnown RBP17.35■□□□□ 0.37
VEGFA-207ENST00000413642 RASL11AQ6T310 242 aa17.35■□□□□ 0.37
VEGFA-207ENST00000413642 CNFNQ9BYD5 112 aa17.35■□□□□ 0.37
VEGFA-207ENST00000413642 COX11Q9Y6N1 276 aa17.35■□□□□ 0.37
VEGFA-207ENST00000413642 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.34■□□□□ 0.37
VEGFA-207ENST00000413642 FAM210AQ96ND0 272 aa17.34■□□□□ 0.37
VEGFA-207ENST00000413642 ANGP03950 147 aaKnown RBP17.33■□□□□ 0.36
VEGFA-207ENST00000413642 SRP19P09132 144 aaKnown RBP17.33■□□□□ 0.36
VEGFA-207ENST00000413642 FOXA3P55318 350 aaPredicted RBP17.33■□□□□ 0.36
VEGFA-207ENST00000413642 TMEM97Q5BJF2 176 aa17.33■□□□□ 0.36
VEGFA-207ENST00000413642 RBX1P62877 108 aa17.32■□□□□ 0.36
VEGFA-207ENST00000413642 FAM231DQ6ZW35 169 aa17.32■□□□□ 0.36
VEGFA-207ENST00000413642 SMIM7Q9BQ49 75 aa17.32■□□□□ 0.36
VEGFA-207ENST00000413642 FAM30AQ9NZY2 134 aa17.32■□□□□ 0.36
VEGFA-207ENST00000413642 TRBV25-1A0A075B6N4 114 aa17.31■□□□□ 0.36
VEGFA-207ENST00000413642 TRAV26-2A0A0B4J265 109 aa17.31■□□□□ 0.36
VEGFA-207ENST00000413642 IQCJQ1A5X6 159 aa17.31■□□□□ 0.36
VEGFA-207ENST00000413642 PGLYRP4Q96LB8 373 aa17.31■□□□□ 0.36
VEGFA-207ENST00000413642 NIT2Q9NQR4 276 aa17.31■□□□□ 0.36
VEGFA-207ENST00000413642 IGHV1-24A0A0C4DH33 117 aa17.3■□□□□ 0.36
VEGFA-207ENST00000413642 Q0VG73 95 aa17.3■□□□□ 0.36
VEGFA-207ENST00000413642 CRPP02741 224 aa17.29■□□□□ 0.36
VEGFA-207ENST00000413642 SMR3BP02814 79 aaPredicted RBP17.29■□□□□ 0.36
VEGFA-207ENST00000413642 CLPSL2Q6UWE3 100 aa17.29■□□□□ 0.36
VEGFA-207ENST00000413642 LINC01551Q86U37 167 aa17.29■□□□□ 0.36
VEGFA-207ENST00000413642 GATD1Q8NB37 220 aa17.29■□□□□ 0.36
VEGFA-207ENST00000413642 ZNF727A8MUV8 499 aa17.28■□□□□ 0.36
VEGFA-207ENST00000413642 LINC01620Q4KN68 170 aa17.28■□□□□ 0.36
VEGFA-207ENST00000413642 C1orf43Q9BWL3 253 aa17.28■□□□□ 0.36
VEGFA-207ENST00000413642 A8MWL6 223 aa17.27■□□□□ 0.36
VEGFA-207ENST00000413642 EPM2AB3EWF7 344 aa17.27■□□□□ 0.36
VEGFA-207ENST00000413642 PKIAP61925 76 aa17.27■□□□□ 0.36
VEGFA-207ENST00000413642 TMEM70Q9BUB7 260 aa17.27■□□□□ 0.36
VEGFA-207ENST00000413642 LINC00269Q8N2A0 174 aa17.26■□□□□ 0.35
VEGFA-207ENST00000413642 RPL39LQ96EH5 51 aaKnown RBP17.25■□□□□ 0.35
VEGFA-207ENST00000413642 C9JQL5 133 aa17.24■□□□□ 0.35
VEGFA-207ENST00000413642 NDUFS6O75380 124 aaKnown RBP17.24■□□□□ 0.35
VEGFA-207ENST00000413642 CT83Q5H943 113 aa17.24■□□□□ 0.35
VEGFA-207ENST00000413642 TMEM243Q9BU79 118 aa17.24■□□□□ 0.35
VEGFA-207ENST00000413642 PRR34Q9NV39 138 aa17.24■□□□□ 0.35
VEGFA-207ENST00000413642 SRSF3P84103 164 aaKnown RBP17.22■□□□□ 0.35
VEGFA-207ENST00000413642 MIAQ16674 131 aa17.22■□□□□ 0.35
VEGFA-207ENST00000413642 Q5VSD8 79 aa17.22■□□□□ 0.35
VEGFA-207ENST00000413642 C20orf203Q8NBC4 194 aa17.22■□□□□ 0.35
VEGFA-207ENST00000413642 IGLV4-60A0A075B6I1 120 aa17.21■□□□□ 0.35
VEGFA-207ENST00000413642 HLA-DQA1P01909 254 aa17.21■□□□□ 0.35
VEGFA-207ENST00000413642 SMIM15Q7Z3B0 74 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms