RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 PYGO1Q9Y3Y4 419 aa13.04□□□□□ -0.32
SDCBP-202ENST00000413219 EDN2P20800 178 aa13.03□□□□□ -0.32
SDCBP-202ENST00000413219 ZFAND6Q6FIF0 208 aa13.03□□□□□ -0.32
SDCBP-202ENST00000413219 SPTA1P02549 2419 aa13.03□□□□□ -0.32
SDCBP-202ENST00000413219 A0A0J9YXV3 536 aa13.03□□□□□ -0.32
SDCBP-202ENST00000413219 A0A0J9YXY3 114 aa13.03□□□□□ -0.32
SDCBP-202ENST00000413219 TRBV30A0A0K0K1B3 111 aa13.03□□□□□ -0.32
SDCBP-202ENST00000413219 SNRPD3P62318 126 aaKnown RBP13.03□□□□□ -0.32
SDCBP-202ENST00000413219 CITED1Q99966 193 aa13.03□□□□□ -0.32
SDCBP-202ENST00000413219 LINC01620Q4KN68 170 aa13.02□□□□□ -0.33
SDCBP-202ENST00000413219 RNF152Q8N8N0 203 aa13.02□□□□□ -0.33
SDCBP-202ENST00000413219 PIMREGQ9BSJ6 248 aa13.02□□□□□ -0.33
SDCBP-202ENST00000413219 TEX29Q8N6K0 151 aa13.01□□□□□ -0.33
SDCBP-202ENST00000413219 TRGV11A0A075B6L2 103 aa13□□□□□ -0.33
SDCBP-202ENST00000413219 TRAV12-2A0A075B6T6 113 aa13□□□□□ -0.33
SDCBP-202ENST00000413219 IGHV4-61A0A0C4DH41 118 aa13□□□□□ -0.33
SDCBP-202ENST00000413219 K7EQG2 157 aa13□□□□□ -0.33
SDCBP-202ENST00000413219 RPL13AP40429 203 aaKnown RBP13□□□□□ -0.33
SDCBP-202ENST00000413219 IGHV3-30-3P0DP02 117 aa13□□□□□ -0.33
SDCBP-202ENST00000413219 MRPS36P82909 103 aaKnown RBP13□□□□□ -0.33
SDCBP-202ENST00000413219 Q1RN00 199 aa13□□□□□ -0.33
SDCBP-202ENST00000413219 TIMM21Q9BVV7 248 aa13□□□□□ -0.33
SDCBP-202ENST00000413219 IGHV3-64A0A075B6Q5 118 aa12.99□□□□□ -0.33
SDCBP-202ENST00000413219 H7C2G1 150 aa12.99□□□□□ -0.33
SDCBP-202ENST00000413219 RNF183Q96D59 192 aa12.99□□□□□ -0.33
SDCBP-202ENST00000413219 LITAFQ99732 161 aa12.99□□□□□ -0.33
SDCBP-202ENST00000413219 TRBV10-2A0A0K0K1G8 114 aa12.98□□□□□ -0.33
SDCBP-202ENST00000413219 PSMB8P28062 276 aa12.98□□□□□ -0.33
SDCBP-202ENST00000413219 ANAPC13Q9BS18 74 aa12.98□□□□□ -0.33
SDCBP-202ENST00000413219 SPANXDQ9BXN6 97 aa12.98□□□□□ -0.33
SDCBP-202ENST00000413219 SPANXCQ9NY87 97 aa12.98□□□□□ -0.33
SDCBP-202ENST00000413219 CEP295Q9C0D2 2601 aa12.98□□□□□ -0.33
SDCBP-202ENST00000413219 NTN5Q8WTR8 489 aaPredicted RBP12.98□□□□□ -0.33
SDCBP-202ENST00000413219 TMEM89A2RUT3 159 aa12.97□□□□□ -0.33
SDCBP-202ENST00000413219 IGKV3-20P01619 116 aa12.97□□□□□ -0.33
SDCBP-202ENST00000413219 SPINK13Q1W4C9 94 aa12.97□□□□□ -0.33
SDCBP-202ENST00000413219 CD28P10747 220 aa12.97□□□□□ -0.33
SDCBP-202ENST00000413219 C10orf105Q8TEF2 133 aa12.97□□□□□ -0.33
SDCBP-202ENST00000413219 ABCA2Q9BZC7 2435 aa12.96□□□□□ -0.33
SDCBP-202ENST00000413219 TRIAP1O43715 76 aa12.96□□□□□ -0.33
SDCBP-202ENST00000413219 ELANEP08246 267 aa12.96□□□□□ -0.33
SDCBP-202ENST00000413219 Q5PR19 223 aa12.96□□□□□ -0.33
SDCBP-202ENST00000413219 FAM104AQ969W3 186 aa12.96□□□□□ -0.33
SDCBP-202ENST00000413219 SPXQ9BT56 116 aa12.96□□□□□ -0.33
SDCBP-202ENST00000413219 IGHV1-58A0A0C4DH39 117 aa12.95□□□□□ -0.34
SDCBP-202ENST00000413219 SNCGO76070 127 aa12.95□□□□□ -0.34
SDCBP-202ENST00000413219 Q6Q795 121 aa12.95□□□□□ -0.34
SDCBP-202ENST00000413219 SVIPQ8NHG7 77 aa12.95□□□□□ -0.34
SDCBP-202ENST00000413219 SPTBN1Q01082 2364 aaKnown RBP12.94□□□□□ -0.34
SDCBP-202ENST00000413219 TINCRA0A1B0GVN0 87 aa12.93□□□□□ -0.34
SDCBP-202ENST00000413219 C19orf84I3L1E1 186 aa12.93□□□□□ -0.34
SDCBP-202ENST00000413219 GAGE2BQ13066 116 aa12.93□□□□□ -0.34
SDCBP-202ENST00000413219 MIAQ16674 131 aa12.93□□□□□ -0.34
SDCBP-202ENST00000413219 GAGE2EQ4V326 116 aa12.93□□□□□ -0.34
SDCBP-202ENST00000413219 GAGE2DQ9UEU5 116 aa12.93□□□□□ -0.34
SDCBP-202ENST00000413219 NDUFA12Q9UI09 145 aa12.93□□□□□ -0.34
SDCBP-202ENST00000413219 ICOSQ9Y6W8 199 aa12.93□□□□□ -0.34
SDCBP-202ENST00000413219 MUC6Q6W4X9 2439 aa12.92□□□□□ -0.34
SDCBP-202ENST00000413219 TRAV8-4A0A0B4J246 113 aa12.92□□□□□ -0.34
SDCBP-202ENST00000413219 H3BMM0 161 aa12.92□□□□□ -0.34
SDCBP-202ENST00000413219 H3BT86 120 aa12.92□□□□□ -0.34
SDCBP-202ENST00000413219 MSMBP08118 114 aa12.92□□□□□ -0.34
SDCBP-202ENST00000413219 UBE2WQ96B02 151 aa12.92□□□□□ -0.34
SDCBP-202ENST00000413219 SPANXA1Q9NS26 97 aa12.92□□□□□ -0.34
SDCBP-202ENST00000413219 COX6CP09669 75 aa12.92□□□□□ -0.34
SDCBP-202ENST00000413219 PIK3CD-AS1Q5SR53 167 aa12.92□□□□□ -0.34
SDCBP-202ENST00000413219 VSIG2Q96IQ7 327 aa12.92□□□□□ -0.34
SDCBP-202ENST00000413219 YAE1D1Q9NRH1 226 aa12.92□□□□□ -0.34
SDCBP-202ENST00000413219 NBASA2RRP1 2371 aa12.91□□□□□ -0.34
SDCBP-202ENST00000413219 TIMM17BO60830 172 aa12.91□□□□□ -0.34
SDCBP-202ENST00000413219 PRSS2P07478 247 aa12.91□□□□□ -0.34
SDCBP-202ENST00000413219 GAGE5Q13069 117 aa12.91□□□□□ -0.34
SDCBP-202ENST00000413219 GAGE6Q13070 117 aa12.91□□□□□ -0.34
SDCBP-202ENST00000413219 TMEM95Q3KNT9 176 aa12.91□□□□□ -0.34
SDCBP-202ENST00000413219 TRAV8-3A0A0A6YYJ7 113 aa12.9□□□□□ -0.34
SDCBP-202ENST00000413219 ADARB2-AS1A8MUL3 147 aa12.9□□□□□ -0.34
SDCBP-202ENST00000413219 BEX4Q9NWD9 120 aaPredicted RBP12.9□□□□□ -0.34
SDCBP-202ENST00000413219 TNFRSF18Q9Y5U5 241 aa12.9□□□□□ -0.34
SDCBP-202ENST00000413219 RELNP78509 3460 aa12.9□□□□□ -0.34
SDCBP-202ENST00000413219 TEX49A0A1B0GTD5 131 aa12.9□□□□□ -0.34
SDCBP-202ENST00000413219 ADAMTSL4-AS1Q5T5F5 129 aa12.9□□□□□ -0.34
SDCBP-202ENST00000413219 C2orf82Q6UX34 121 aa12.9□□□□□ -0.34
SDCBP-202ENST00000413219 IFITM1P13164 125 aa12.89□□□□□ -0.35
SDCBP-202ENST00000413219 MRPL23Q16540 153 aaKnown RBP12.89□□□□□ -0.35
SDCBP-202ENST00000413219 ASH1LQ9NR48 2969 aaKnown RBP12.89□□□□□ -0.35
SDCBP-202ENST00000413219 TRAV4A0A0B4J268 109 aa12.89□□□□□ -0.35
SDCBP-202ENST00000413219 NHLRC4P0CG21 123 aaPredicted RBP12.89□□□□□ -0.35
SDCBP-202ENST00000413219 H7C423 109 aa12.88□□□□□ -0.35
SDCBP-202ENST00000413219 GATA3P23771 443 aa12.88□□□□□ -0.35
SDCBP-202ENST00000413219 NDUFV3P56181 108 aaKnown RBP12.88□□□□□ -0.35
SDCBP-202ENST00000413219 CCL19Q99731 98 aa12.88□□□□□ -0.35
SDCBP-202ENST00000413219 A8MTW9 85 aa12.87□□□□□ -0.35
SDCBP-202ENST00000413219 TMEM61Q8N0U2 210 aa12.87□□□□□ -0.35
SDCBP-202ENST00000413219 CHCHD7Q9BUK0 85 aa12.87□□□□□ -0.35
SDCBP-202ENST00000413219 UBE2D4Q9Y2X8 147 aa12.87□□□□□ -0.35
SDCBP-202ENST00000413219 IGHV4-30-2A0A087WSY4 118 aa12.87□□□□□ -0.35
SDCBP-202ENST00000413219 CRLF1O75462 422 aa12.87□□□□□ -0.35
SDCBP-202ENST00000413219 RBMY1A1P0DJD3 496 aaKnown RBP12.87□□□□□ -0.35
SDCBP-202ENST00000413219 RBMY1CP0DJD4 496 aa12.87□□□□□ -0.35
SDCBP-202ENST00000413219 SYNJ2BPP57105 145 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms