RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 MED9Q9NWA0 146 aa2.27□□□□□ -2.05
LSM5-205ENST00000409952 MKI67P46013 3256 aaKnown RBP2.27□□□□□ -2.05
LSM5-205ENST00000409952 PTPN23Q9H3S7 1636 aa2.27□□□□□ -2.05
LSM5-205ENST00000409952 FBN3Q75N90 2809 aa2.27□□□□□ -2.05
LSM5-205ENST00000409952 MYH1P12882 1939 aa2.27□□□□□ -2.05
LSM5-205ENST00000409952 HECTD1Q9ULT8 2610 aa2.26□□□□□ -2.05
LSM5-205ENST00000409952 LAMB2P55268 1798 aa2.26□□□□□ -2.05
LSM5-205ENST00000409952 KIDINS220Q9ULH0 1771 aa2.26□□□□□ -2.05
LSM5-205ENST00000409952 M0R2N4 97 aa2.26□□□□□ -2.05
LSM5-205ENST00000409952 INE1O15225 51 aa2.26□□□□□ -2.05
LSM5-205ENST00000409952 PPYP01298 95 aa2.26□□□□□ -2.05
LSM5-205ENST00000409952 IGKCP01834 107 aa2.26□□□□□ -2.05
LSM5-205ENST00000409952 KRTAP13-4Q3LI77 160 aa2.26□□□□□ -2.05
LSM5-205ENST00000409952 SVBPQ8N300 66 aa2.26□□□□□ -2.05
LSM5-205ENST00000409952 NRXN3Q9Y4C0 1643 aa2.26□□□□□ -2.05
LSM5-205ENST00000409952 RBBP6Q7Z6E9 1792 aaKnown RBP2.26□□□□□ -2.05
LSM5-205ENST00000409952 UBR1Q8IWV7 1749 aa2.25□□□□□ -2.05
LSM5-205ENST00000409952 MYO5CQ9NQX4 1742 aa2.25□□□□□ -2.05
LSM5-205ENST00000409952 BRWD1Q9NSI6 2320 aa2.25□□□□□ -2.05
LSM5-205ENST00000409952 CXorf51AA0A1B0GTR3 108 aa2.25□□□□□ -2.05
LSM5-205ENST00000409952 JMJD7-PLA2G4BH0Y9G9 81 aa2.25□□□□□ -2.05
LSM5-205ENST00000409952 M0R143 59 aa2.25□□□□□ -2.05
LSM5-205ENST00000409952 IFNA17P01571 189 aa2.25□□□□□ -2.05
LSM5-205ENST00000409952 PRB4P10163 310 aaPredicted RBP2.25□□□□□ -2.05
LSM5-205ENST00000409952 IFITM1P13164 125 aa2.25□□□□□ -2.05
LSM5-205ENST00000409952 LIMD2Q9BT23 127 aa2.25□□□□□ -2.05
LSM5-205ENST00000409952 TMEM14CQ9P0S9 112 aa2.25□□□□□ -2.05
LSM5-205ENST00000409952 CFAP54Q96N23 3096 aa2.25□□□□□ -2.05
LSM5-205ENST00000409952 MUC3AQ02505 3323 aa2.25□□□□□ -2.05
LSM5-205ENST00000409952 MYO9AB2RTY4 2548 aa2.25□□□□□ -2.05
LSM5-205ENST00000409952 KIAA1549Q9HCM3 1950 aa2.25□□□□□ -2.05
LSM5-205ENST00000409952 MAP1BP46821 2468 aaKnown RBP2.25□□□□□ -2.05
LSM5-205ENST00000409952 HELZP42694 1942 aaKnown RBP2.25□□□□□ -2.05
LSM5-205ENST00000409952 SAMD9Q5K651 1589 aa2.24□□□□□ -2.05
LSM5-205ENST00000409952 SCN3AQ9NY46 2000 aa2.24□□□□□ -2.05
LSM5-205ENST00000409952 IGLV3-32A0A0A0MS00 114 aa2.24□□□□□ -2.05
LSM5-205ENST00000409952 NUPR2A6NF83 97 aa2.24□□□□□ -2.05
LSM5-205ENST00000409952 OOSP1A8MZH6 123 aa2.24□□□□□ -2.05
LSM5-205ENST00000409952 IGHV3-30P01768 117 aa2.24□□□□□ -2.05
LSM5-205ENST00000409952 GYPBP06028 91 aa2.24□□□□□ -2.05
LSM5-205ENST00000409952 IGHV3-30-5P0DP03 117 aa2.24□□□□□ -2.05
LSM5-205ENST00000409952 KRTAP10-10P60014 251 aa2.24□□□□□ -2.05
LSM5-205ENST00000409952 NPC2P61916 151 aa2.24□□□□□ -2.05
LSM5-205ENST00000409952 DEFB103AP81534 67 aa2.24□□□□□ -2.05
LSM5-205ENST00000409952 RPL7L1Q6DKI1 246 aaKnown RBP2.24□□□□□ -2.05
LSM5-205ENST00000409952 SLC48A1Q6P1K1 146 aa2.24□□□□□ -2.05
LSM5-205ENST00000409952 C10orf105Q8TEF2 133 aa2.24□□□□□ -2.05
LSM5-205ENST00000409952 DMAC1Q96GE9 116 aa2.24□□□□□ -2.05
LSM5-205ENST00000409952 ATG5Q9H1Y0 275 aa2.24□□□□□ -2.05
LSM5-205ENST00000409952 MRPL36Q9P0J6 103 aaKnown RBP2.24□□□□□ -2.05
LSM5-205ENST00000409952 SNURFQ9Y675 71 aa2.24□□□□□ -2.05
LSM5-205ENST00000409952 NCOA2Q15596 1464 aa2.24□□□□□ -2.05
LSM5-205ENST00000409952 QSER1Q2KHR3 1735 aa2.23□□□□□ -2.05
LSM5-205ENST00000409952 MYH6P13533 1939 aa2.23□□□□□ -2.05
LSM5-205ENST00000409952 MLH3Q9UHC1 1453 aa2.23□□□□□ -2.05
LSM5-205ENST00000409952 LOC110117498A0A087WWA1 95 aa2.23□□□□□ -2.05
LSM5-205ENST00000409952 PIGBOS1A0A0B4J2F0 54 aa2.23□□□□□ -2.05
LSM5-205ENST00000409952 TRBV10-1A0A0K0K1A3 114 aa2.23□□□□□ -2.05
LSM5-205ENST00000409952 A6NIN4 97 aa2.23□□□□□ -2.05
LSM5-205ENST00000409952 DNAL4O96015 105 aa2.23□□□□□ -2.05
LSM5-205ENST00000409952 SPINK8P0C7L1 97 aa2.23□□□□□ -2.05
LSM5-205ENST00000409952 C9orf116Q5BN46 136 aaPredicted RBP2.23□□□□□ -2.05
LSM5-205ENST00000409952 NDUFA11Q86Y39 141 aa2.23□□□□□ -2.05
LSM5-205ENST00000409952 Q8N8P6 123 aa2.23□□□□□ -2.05
LSM5-205ENST00000409952 TSKUQ8WUA8 353 aa2.23□□□□□ -2.05
LSM5-205ENST00000409952 ZNF625Q96I27 306 aaPredicted RBP2.23□□□□□ -2.05
LSM5-205ENST00000409952 ZFHX4Q86UP3 3567 aa2.23□□□□□ -2.05
LSM5-205ENST00000409952 DAPK1P53355 1430 aa2.23□□□□□ -2.05
LSM5-205ENST00000409952 C2CD3Q4AC94 2353 aa2.23□□□□□ -2.05
LSM5-205ENST00000409952 MUC4Q99102 2169 aa2.23□□□□□ -2.05
LSM5-205ENST00000409952 CFAP46Q8IYW2 2715 aa2.23□□□□□ -2.05
LSM5-205ENST00000409952 PAPPA2Q9BXP8 1791 aa2.23□□□□□ -2.05
LSM5-205ENST00000409952 MYH7P12883 1935 aa2.23□□□□□ -2.05
LSM5-205ENST00000409952 BPTFQ12830 3046 aa2.23□□□□□ -2.05
LSM5-205ENST00000409952 USP24Q9UPU5 2620 aa2.22□□□□□ -2.05
LSM5-205ENST00000409952 MDC1Q14676 2089 aaKnown RBP2.22□□□□□ -2.05
LSM5-205ENST00000409952 PRUNE2Q8WUY3 3088 aa2.22□□□□□ -2.05
LSM5-205ENST00000409952 C5orf42Q9H799 3197 aa2.22□□□□□ -2.05
LSM5-205ENST00000409952 LAMC1P11047 1609 aa2.22□□□□□ -2.05
LSM5-205ENST00000409952 IGLV3-1P01715 115 aa2.22□□□□□ -2.05
LSM5-205ENST00000409952 PDE6GP18545 87 aa2.22□□□□□ -2.05
LSM5-205ENST00000409952 CBLN1P23435 193 aa2.22□□□□□ -2.05
LSM5-205ENST00000409952 PKIAP61925 76 aa2.22□□□□□ -2.05
LSM5-205ENST00000409952 UBE2G1P62253 170 aa2.22□□□□□ -2.05
LSM5-205ENST00000409952 IQCJQ1A5X6 159 aa2.22□□□□□ -2.05
LSM5-205ENST00000409952 LINC00322Q6ZN03 302 aaPredicted RBP2.22□□□□□ -2.05
LSM5-205ENST00000409952 C22orf24Q9Y442 160 aa2.22□□□□□ -2.05
LSM5-205ENST00000409952 MYH13Q9UKX3 1938 aa2.22□□□□□ -2.05
LSM5-205ENST00000409952 BRCA2P51587 3418 aa2.22□□□□□ -2.05
LSM5-205ENST00000409952 FN1P02751 2386 aaKnown RBP2.22□□□□□ -2.05
LSM5-205ENST00000409952 SLIT1O75093 1534 aa2.22□□□□□ -2.05
LSM5-205ENST00000409952 SYCP2Q9BX26 1530 aa2.22□□□□□ -2.05
LSM5-205ENST00000409952 QRICH2Q9H0J4 1663 aa2.22□□□□□ -2.05
LSM5-205ENST00000409952 ICE1Q9Y2F5 2266 aa2.21□□□□□ -2.06
LSM5-205ENST00000409952 AKAP11Q9UKA4 1901 aa2.21□□□□□ -2.06
LSM5-205ENST00000409952 RTTNQ86VV8 2226 aa2.21□□□□□ -2.06
LSM5-205ENST00000409952 IGKV3-7A0A075B6H7 116 aa2.21□□□□□ -2.06
LSM5-205ENST00000409952 HCRTO43612 131 aa2.21□□□□□ -2.06
LSM5-205ENST00000409952 SPRNQ5BIV9 151 aa2.21□□□□□ -2.06
LSM5-205ENST00000409952 S100A7L2Q5SY68 101 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms