RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 CREBBPQ92793 2442 aa12.2□□□□□ -0.46
LSP1-204ENST00000406638 IGHV7-81A0A0B4J1V7 117 aa12.2□□□□□ -0.46
LSP1-204ENST00000406638 LY6EQ16553 131 aa12.2□□□□□ -0.46
LSP1-204ENST00000406638 Q1RN00 199 aa12.2□□□□□ -0.46
LSP1-204ENST00000406638 C3orf56Q8N813 242 aa12.2□□□□□ -0.46
LSP1-204ENST00000406638 ITPR2Q14571 2701 aa12.19□□□□□ -0.46
LSP1-204ENST00000406638 SCGB2A1O75556 95 aa12.19□□□□□ -0.46
LSP1-204ENST00000406638 EBI3Q14213 229 aa12.19□□□□□ -0.46
LSP1-204ENST00000406638 C15orf32Q32M92 178 aa12.19□□□□□ -0.46
LSP1-204ENST00000406638 PHLDA3Q9Y5J5 127 aa12.19□□□□□ -0.46
LSP1-204ENST00000406638 GCN1Q92616 2671 aaKnown RBP12.19□□□□□ -0.46
LSP1-204ENST00000406638 TRAV2A0A0B4J234 112 aa12.19□□□□□ -0.46
LSP1-204ENST00000406638 ZNRF2Q8NHG8 242 aa12.19□□□□□ -0.46
LSP1-204ENST00000406638 ZFAND3Q9H8U3 227 aa12.19□□□□□ -0.46
LSP1-204ENST00000406638 TRAV8-4A0A0B4J246 113 aa12.18□□□□□ -0.46
LSP1-204ENST00000406638 G3V318 75 aa12.18□□□□□ -0.46
LSP1-204ENST00000406638 J3QQQ9 107 aa12.18□□□□□ -0.46
LSP1-204ENST00000406638 AMELXQ99217 191 aa12.18□□□□□ -0.46
LSP1-204ENST00000406638 HECTD1Q9ULT8 2610 aa12.17□□□□□ -0.46
LSP1-204ENST00000406638 IGHV3-64A0A075B6Q5 118 aa12.17□□□□□ -0.46
LSP1-204ENST00000406638 CLPSL1A2RUU4 121 aa12.17□□□□□ -0.46
LSP1-204ENST00000406638 DEFB1P60022 68 aa12.17□□□□□ -0.46
LSP1-204ENST00000406638 PMVKQ15126 192 aa12.17□□□□□ -0.46
LSP1-204ENST00000406638 LINC01620Q4KN68 170 aa12.17□□□□□ -0.46
LSP1-204ENST00000406638 MEIG1Q5JSS6 88 aa12.17□□□□□ -0.46
LSP1-204ENST00000406638 TMEM263Q8WUH6 116 aaKnown RBP12.17□□□□□ -0.46
LSP1-204ENST00000406638 SONP18583 2426 aaKnown RBP12.17□□□□□ -0.46
LSP1-204ENST00000406638 MXRA5Q9NR99 2828 aa12.17□□□□□ -0.46
LSP1-204ENST00000406638 OOSP1A8MZH6 123 aa12.17□□□□□ -0.46
LSP1-204ENST00000406638 BRI3O95415 125 aa12.17□□□□□ -0.46
LSP1-204ENST00000406638 LGALS3P17931 250 aaKnown RBP12.17□□□□□ -0.46
LSP1-204ENST00000406638 ECSCRQ19T08 205 aa12.17□□□□□ -0.46
LSP1-204ENST00000406638 C9orf47Q6ZRZ4 202 aa12.17□□□□□ -0.46
LSP1-204ENST00000406638 GPHB5Q86YW7 130 aa12.17□□□□□ -0.46
LSP1-204ENST00000406638 FASNP49327 2511 aaKnown RBP12.16□□□□□ -0.46
LSP1-204ENST00000406638 IGIPA6NJ69 53 aa12.16□□□□□ -0.46
LSP1-204ENST00000406638 MUSTN1Q8IVN3 82 aa12.16□□□□□ -0.46
LSP1-204ENST00000406638 CLEC19AQ6UXS0 136 aa12.16□□□□□ -0.46
LSP1-204ENST00000406638 ITPR3Q14573 2671 aa12.15□□□□□ -0.46
LSP1-204ENST00000406638 B4DSR2 109 aa12.15□□□□□ -0.46
LSP1-204ENST00000406638 J3QKU1 62 aa12.15□□□□□ -0.46
LSP1-204ENST00000406638 ATP6V0E1O15342 81 aa12.15□□□□□ -0.46
LSP1-204ENST00000406638 DEFB113Q30KQ7 82 aa12.15□□□□□ -0.46
LSP1-204ENST00000406638 PAPPA-AS1Q5QFB9 102 aa12.15□□□□□ -0.46
LSP1-204ENST00000406638 GNRH2O43555 120 aa12.15□□□□□ -0.46
LSP1-204ENST00000406638 ATXN8Q156A1 80 aa12.14□□□□□ -0.47
LSP1-204ENST00000406638 Q6Q795 121 aa12.14□□□□□ -0.47
LSP1-204ENST00000406638 KRTAP1-3Q8IUG1 177 aa12.14□□□□□ -0.47
LSP1-204ENST00000406638 C16orf92Q96LL3 132 aa12.14□□□□□ -0.47
LSP1-204ENST00000406638 M0QXV9 152 aa12.14□□□□□ -0.47
LSP1-204ENST00000406638 ACANP16112 2415 aa12.14□□□□□ -0.47
LSP1-204ENST00000406638 OPRPNQ99935 248 aaPredicted RBP12.14□□□□□ -0.47
LSP1-204ENST00000406638 H3BUX3 64 aa12.13□□□□□ -0.47
LSP1-204ENST00000406638 Q96MF0 132 aa12.13□□□□□ -0.47
LSP1-204ENST00000406638 CHCHD5Q9BSY4 110 aa12.13□□□□□ -0.47
LSP1-204ENST00000406638 CR1P17927 2039 aa12.13□□□□□ -0.47
LSP1-204ENST00000406638 C20orf173Q96LM9 149 aa12.13□□□□□ -0.47
LSP1-204ENST00000406638 PDZD2O15018 2839 aa12.12□□□□□ -0.47
LSP1-204ENST00000406638 C5orf56Q8N8D9 126 aa12.12□□□□□ -0.47
LSP1-204ENST00000406638 OR10J6PQ8NGY7 276 aa12.12□□□□□ -0.47
LSP1-204ENST00000406638 JPT2Q9H910 190 aa12.12□□□□□ -0.47
LSP1-204ENST00000406638 H3BMM0 161 aa12.12□□□□□ -0.47
LSP1-204ENST00000406638 P0DMU3 169 aa12.12□□□□□ -0.47
LSP1-204ENST00000406638 FAM231AP0DMU4 169 aa12.12□□□□□ -0.47
LSP1-204ENST00000406638 FAM231CP0DMU5 169 aa12.12□□□□□ -0.47
LSP1-204ENST00000406638 UBE2WQ96B02 151 aa12.12□□□□□ -0.47
LSP1-204ENST00000406638 ZFAND2AQ8N6M9 145 aa12.11□□□□□ -0.47
LSP1-204ENST00000406638 WFDC11Q8NEX6 87 aa12.11□□□□□ -0.47
LSP1-204ENST00000406638 UNC79Q9P2D8 2635 aa12.11□□□□□ -0.47
LSP1-204ENST00000406638 LGALS9O00182 355 aa12.11□□□□□ -0.47
LSP1-204ENST00000406638 TRIAP1O43715 76 aa12.11□□□□□ -0.47
LSP1-204ENST00000406638 RNASE4P34096 147 aaKnown RBP12.11□□□□□ -0.47
LSP1-204ENST00000406638 DSCR9P59020 149 aa12.11□□□□□ -0.47
LSP1-204ENST00000406638 BLCAPP62952 87 aa12.11□□□□□ -0.47
LSP1-204ENST00000406638 ZNF56Q15929 161 aa12.11□□□□□ -0.47
LSP1-204ENST00000406638 LINC01356Q8N9X3 169 aa12.11□□□□□ -0.47
LSP1-204ENST00000406638 FLNAP21333 2647 aaKnown RBP12.11□□□□□ -0.47
LSP1-204ENST00000406638 CUBNO60494 3623 aa12.11□□□□□ -0.47
LSP1-204ENST00000406638 TRBV10-2A0A0K0K1G8 114 aa12.1□□□□□ -0.47
LSP1-204ENST00000406638 IGHV4-31P0DP07 118 aa12.1□□□□□ -0.47
LSP1-204ENST00000406638 RPL13AP40429 203 aaKnown RBP12.1□□□□□ -0.47
LSP1-204ENST00000406638 C2orf82Q6UX34 121 aa12.1□□□□□ -0.47
LSP1-204ENST00000406638 CCDC140Q96MF4 163 aa12.1□□□□□ -0.47
LSP1-204ENST00000406638 METTL26Q96S19 204 aa12.1□□□□□ -0.47
LSP1-204ENST00000406638 MUC4Q99102 2169 aa12.1□□□□□ -0.47
LSP1-204ENST00000406638 A0A0B4J2C4 111 aa12.1□□□□□ -0.47
LSP1-204ENST00000406638 ZNF876PQ49A33 203 aa12.1□□□□□ -0.47
LSP1-204ENST00000406638 DUX3Q96PT4 197 aa12.1□□□□□ -0.47
LSP1-204ENST00000406638 ZNF580Q9UK33 172 aa12.1□□□□□ -0.47
LSP1-204ENST00000406638 NOTCH2Q04721 2471 aa12.1□□□□□ -0.47
LSP1-204ENST00000406638 TRAV21A0A0B4J279 112 aa12.09□□□□□ -0.47
LSP1-204ENST00000406638 A0A087WWL8 130 aa12.09□□□□□ -0.47
LSP1-204ENST00000406638 ADARB2-AS1A8MUL3 147 aa12.09□□□□□ -0.47
LSP1-204ENST00000406638 F5H697 171 aa12.09□□□□□ -0.47
LSP1-204ENST00000406638 DEFB112Q30KQ8 113 aa12.09□□□□□ -0.47
LSP1-204ENST00000406638 TNFRSF18Q9Y5U5 241 aa12.09□□□□□ -0.47
LSP1-204ENST00000406638 RNASE3P12724 160 aaKnown RBP12.08□□□□□ -0.47
LSP1-204ENST00000406638 MRPL53Q96EL3 112 aaKnown RBP12.08□□□□□ -0.47
LSP1-204ENST00000406638 PPP1R17O96001 155 aa12.08□□□□□ -0.48
LSP1-204ENST00000406638 IGHV4-59P01825 116 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms