RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 MGPP08493 103 aa7.35□□□□□ -1.23
RPAIN-204ENST00000405578 EVI2AP22794 236 aa7.35□□□□□ -1.23
RPAIN-204ENST00000405578 S100PP25815 95 aa7.35□□□□□ -1.23
RPAIN-204ENST00000405578 CCL18P55774 89 aa7.35□□□□□ -1.23
RPAIN-204ENST00000405578 S100A12P80511 92 aa7.35□□□□□ -1.23
RPAIN-204ENST00000405578 UFSP1Q6NVU6 142 aa7.35□□□□□ -1.23
RPAIN-204ENST00000405578 UBE2DNLQ8IWF7 75 aa7.35□□□□□ -1.23
RPAIN-204ENST00000405578 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.35□□□□□ -1.23
RPAIN-204ENST00000405578 VSIG2Q96IQ7 327 aa7.35□□□□□ -1.23
RPAIN-204ENST00000405578 IMMP2LQ96T52 175 aa7.35□□□□□ -1.23
RPAIN-204ENST00000405578 MSRB1Q9NZV6 116 aa7.35□□□□□ -1.23
RPAIN-204ENST00000405578 NEGR1Q7Z3B1 354 aa7.34□□□□□ -1.23
RPAIN-204ENST00000405578 ATP5L2Q7Z4Y8 100 aa7.34□□□□□ -1.23
RPAIN-204ENST00000405578 CLRN3Q8NCR9 226 aa7.34□□□□□ -1.23
RPAIN-204ENST00000405578 RPS10P5Q9NQ39 176 aa7.34□□□□□ -1.23
RPAIN-204ENST00000405578 TMEM242Q9NWH2 141 aa7.34□□□□□ -1.23
RPAIN-204ENST00000405578 A0A087WWC5 75 aa7.33□□□□□ -1.24
RPAIN-204ENST00000405578 C7orf77A4D0Y5 90 aa7.33□□□□□ -1.24
RPAIN-204ENST00000405578 HBBP68871 147 aa7.33□□□□□ -1.24
RPAIN-204ENST00000405578 RPL36AP83881 106 aaKnown RBP7.33□□□□□ -1.24
RPAIN-204ENST00000405578 RPL36ALQ969Q0 106 aaKnown RBP7.33□□□□□ -1.24
RPAIN-204ENST00000405578 BTF3L4Q96K17 158 aa7.33□□□□□ -1.24
RPAIN-204ENST00000405578 TMEM191AQ9H0A3 160 aa7.33□□□□□ -1.24
RPAIN-204ENST00000405578 KIF25-AS1Q9Y6Z4 181 aa7.33□□□□□ -1.24
RPAIN-204ENST00000405578 TRAV9-1A0A075B6T8 112 aa7.32□□□□□ -1.24
RPAIN-204ENST00000405578 A0A096LPF7 62 aa7.32□□□□□ -1.24
RPAIN-204ENST00000405578 RTL8CO15255 209 aa7.32□□□□□ -1.24
RPAIN-204ENST00000405578 CAMPP49913 170 aa7.32□□□□□ -1.24
RPAIN-204ENST00000405578 FAM3BP58499 235 aaPredicted RBP7.32□□□□□ -1.24
RPAIN-204ENST00000405578 MRPL54Q6P161 138 aaKnown RBP7.32□□□□□ -1.24
RPAIN-204ENST00000405578 Q6ZSN1 163 aa7.32□□□□□ -1.24
RPAIN-204ENST00000405578 FRZBQ92765 325 aa7.32□□□□□ -1.24
RPAIN-204ENST00000405578 TRBV7-3A0A075B6L6 115 aa7.31□□□□□ -1.24
RPAIN-204ENST00000405578 GAGE12JA6NER3 117 aa7.31□□□□□ -1.24
RPAIN-204ENST00000405578 LINC00315P59091 139 aa7.31□□□□□ -1.24
RPAIN-204ENST00000405578 GAGE1Q13065 139 aa7.31□□□□□ -1.24
RPAIN-204ENST00000405578 GAGE4Q13068 117 aa7.31□□□□□ -1.24
RPAIN-204ENST00000405578 GAGE5Q13069 117 aa7.31□□□□□ -1.24
RPAIN-204ENST00000405578 GAGE13Q4V321 117 aa7.31□□□□□ -1.24
RPAIN-204ENST00000405578 SUMO4Q6EEV6 95 aa7.31□□□□□ -1.24
RPAIN-204ENST00000405578 RASL11AQ6T310 242 aa7.31□□□□□ -1.24
RPAIN-204ENST00000405578 DNAJC30Q96LL9 226 aa7.31□□□□□ -1.24
RPAIN-204ENST00000405578 TNFRSF18Q9Y5U5 241 aa7.31□□□□□ -1.24
RPAIN-204ENST00000405578 LOC100131303A0A0U1RQF7 123 aa7.3□□□□□ -1.24
RPAIN-204ENST00000405578 M0QY20 66 aa7.3□□□□□ -1.24
RPAIN-204ENST00000405578 SCO1O75880 301 aa7.3□□□□□ -1.24
RPAIN-204ENST00000405578 PPP1R17O96001 155 aa7.3□□□□□ -1.24
RPAIN-204ENST00000405578 LINC00518Q8N0U6 118 aa7.3□□□□□ -1.24
RPAIN-204ENST00000405578 MAPKAPK5-AS1Q8N8E1 139 aa7.3□□□□□ -1.24
RPAIN-204ENST00000405578 ATP6V0E2Q8NHE4 81 aa7.3□□□□□ -1.24
RPAIN-204ENST00000405578 ZNRF2Q8NHG8 242 aa7.3□□□□□ -1.24
RPAIN-204ENST00000405578 TIRAPP58753 221 aa7.29□□□□□ -1.24
RPAIN-204ENST00000405578 MRAP2Q96G30 205 aa7.29□□□□□ -1.24
RPAIN-204ENST00000405578 NIT2Q9NQR4 276 aa7.29□□□□□ -1.24
RPAIN-204ENST00000405578 URGCP-MRPS24S4R325 110 aa7.29□□□□□ -1.24
RPAIN-204ENST00000405578 DMBT1Q9UGM3 2413 aaPredicted RBP7.29□□□□□ -1.24
RPAIN-204ENST00000405578 TRAV8-6A0A0B4J262 113 aa7.28□□□□□ -1.24
RPAIN-204ENST00000405578 A0A1B0GXF2 115 aa7.28□□□□□ -1.24
RPAIN-204ENST00000405578 M0R2N4 97 aa7.28□□□□□ -1.24
RPAIN-204ENST00000405578 RAB4AP20338 218 aa7.28□□□□□ -1.24
RPAIN-204ENST00000405578 ESRGQ1W209 222 aa7.28□□□□□ -1.24
RPAIN-204ENST00000405578 TMEM97Q5BJF2 176 aa7.28□□□□□ -1.24
RPAIN-204ENST00000405578 FAM104BQ5XKR9 115 aa7.28□□□□□ -1.24
RPAIN-204ENST00000405578 LYPD5Q6UWN5 251 aa7.28□□□□□ -1.24
RPAIN-204ENST00000405578 DAZ4Q86SG3 579 aaKnown RBP7.28□□□□□ -1.24
RPAIN-204ENST00000405578 AMN1Q8IY45 258 aa7.28□□□□□ -1.24
RPAIN-204ENST00000405578 NEXN-AS1Q8NBZ9 246 aa7.28□□□□□ -1.24
RPAIN-204ENST00000405578 GTSF1LQ9H1H1 148 aa7.28□□□□□ -1.24
RPAIN-204ENST00000405578 DAZ3Q9NR90 486 aaKnown RBP7.28□□□□□ -1.24
RPAIN-204ENST00000405578 MRPS16Q9Y3D3 137 aaKnown RBP7.28□□□□□ -1.24
RPAIN-204ENST00000405578 TRAV26-2A0A0B4J265 109 aa7.27□□□□□ -1.25
RPAIN-204ENST00000405578 PPBPP02775 128 aa7.27□□□□□ -1.25
RPAIN-204ENST00000405578 CKS2P33552 79 aa7.27□□□□□ -1.25
RPAIN-204ENST00000405578 UBE2D3P61077 147 aa7.27□□□□□ -1.25
RPAIN-204ENST00000405578 UBE2D2P62837 147 aa7.27□□□□□ -1.25
RPAIN-204ENST00000405578 COX19Q49B96 90 aa7.27□□□□□ -1.25
RPAIN-204ENST00000405578 OR10J3Q5JRS4 329 aa7.27□□□□□ -1.25
RPAIN-204ENST00000405578 GATD1Q8NB37 220 aa7.27□□□□□ -1.25
RPAIN-204ENST00000405578 LINC00588Q9Y4M8 146 aa7.27□□□□□ -1.25
RPAIN-204ENST00000405578 LINC00694P0DN24 101 aa7.26□□□□□ -1.25
RPAIN-204ENST00000405578 LELP1Q5T871 98 aa7.26□□□□□ -1.25
RPAIN-204ENST00000405578 RNF185Q96GF1 192 aa7.26□□□□□ -1.25
RPAIN-204ENST00000405578 UPK3BQ9BT76 320 aa7.26□□□□□ -1.25
RPAIN-204ENST00000405578 CDK2AP2O75956 126 aa7.25□□□□□ -1.25
RPAIN-204ENST00000405578 MRPL51Q4U2R6 128 aaKnown RBP7.25□□□□□ -1.25
RPAIN-204ENST00000405578 ST20Q9HBF5 79 aa7.25□□□□□ -1.25
RPAIN-204ENST00000405578 SMCO4Q9NRQ5 59 aa7.25□□□□□ -1.25
RPAIN-204ENST00000405578 Q9UF83 564 aa7.25□□□□□ -1.25
RPAIN-204ENST00000405578 LRP1BQ9NZR2 4599 aa7.25□□□□□ -1.25
RPAIN-204ENST00000405578 TRAV9-2A0A087WT02 112 aa7.24□□□□□ -1.25
RPAIN-204ENST00000405578 TRBV6-5A0A0K0K1A5 114 aa7.24□□□□□ -1.25
RPAIN-204ENST00000405578 SIVA1O15304 175 aa7.24□□□□□ -1.25
RPAIN-204ENST00000405578 HLA-DQA1P01909 254 aa7.24□□□□□ -1.25
RPAIN-204ENST00000405578 MT-ND6P03923 174 aa7.24□□□□□ -1.25
RPAIN-204ENST00000405578 PKIAP61925 76 aa7.24□□□□□ -1.25
RPAIN-204ENST00000405578 COTL1Q14019 142 aa7.24□□□□□ -1.25
RPAIN-204ENST00000405578 ORMDL3Q8N138 153 aa7.24□□□□□ -1.25
RPAIN-204ENST00000405578 RPL39LQ96EH5 51 aaKnown RBP7.24□□□□□ -1.25
RPAIN-204ENST00000405578 GNB1LQ9BYB4 327 aa7.24□□□□□ -1.25
RPAIN-204ENST00000405578 Q9H8V8 135 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms