RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 FAM231BA6NCW3 169 aa12.98□□□□□ -0.33
RTN4-207ENST00000402434 TSKUQ8WUA8 353 aa12.98□□□□□ -0.33
RTN4-207ENST00000402434 MGPP08493 103 aa12.97□□□□□ -0.33
RTN4-207ENST00000402434 C15orf54Q8N8G6 183 aa12.97□□□□□ -0.33
RTN4-207ENST00000402434 TNFRSF18Q9Y5U5 241 aa12.97□□□□□ -0.33
RTN4-207ENST00000402434 V9GYV3 84 aa12.97□□□□□ -0.33
RTN4-207ENST00000402434 SUMO4Q6EEV6 95 aa12.97□□□□□ -0.33
RTN4-207ENST00000402434 NFE4Q86UQ8 179 aa12.97□□□□□ -0.33
RTN4-207ENST00000402434 PGLYRP4Q96LB8 373 aa12.97□□□□□ -0.33
RTN4-207ENST00000402434 H7C1H1 209 aa12.96□□□□□ -0.34
RTN4-207ENST00000402434 IFITM2Q01629 132 aa12.96□□□□□ -0.34
RTN4-207ENST00000402434 CLLU1Q5K131 121 aa12.96□□□□□ -0.34
RTN4-207ENST00000402434 HIGD1CA8MV81 97 aa12.95□□□□□ -0.34
RTN4-207ENST00000402434 IBA57-AS1B1ANH7 110 aa12.95□□□□□ -0.34
RTN4-207ENST00000402434 ADIRFQ15847 76 aa12.95□□□□□ -0.34
RTN4-207ENST00000402434 DNAJC30Q96LL9 226 aa12.95□□□□□ -0.34
RTN4-207ENST00000402434 DAZ4Q86SG3 579 aaKnown RBP12.94□□□□□ -0.34
RTN4-207ENST00000402434 DAZ3Q9NR90 486 aaKnown RBP12.94□□□□□ -0.34
RTN4-207ENST00000402434 TRBV6-8A0A0A6YYG3 113 aa12.93□□□□□ -0.34
RTN4-207ENST00000402434 IGHV3-30P01768 117 aa12.93□□□□□ -0.34
RTN4-207ENST00000402434 IGHV3-33P01772 117 aa12.93□□□□□ -0.34
RTN4-207ENST00000402434 IGHV3-30-3P0DP02 117 aa12.93□□□□□ -0.34
RTN4-207ENST00000402434 IGHV3-30-5P0DP03 117 aa12.93□□□□□ -0.34
RTN4-207ENST00000402434 RASL11AQ6T310 242 aa12.93□□□□□ -0.34
RTN4-207ENST00000402434 NIT1Q86X76 327 aa12.93□□□□□ -0.34
RTN4-207ENST00000402434 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.93□□□□□ -0.34
RTN4-207ENST00000402434 A0A1B0GUT8 65 aa12.92□□□□□ -0.34
RTN4-207ENST00000402434 SMIM15Q7Z3B0 74 aa12.92□□□□□ -0.34
RTN4-207ENST00000402434 Q8N3U1 123 aa12.92□□□□□ -0.34
RTN4-207ENST00000402434 NIT2Q9NQR4 276 aa12.92□□□□□ -0.34
RTN4-207ENST00000402434 LAGE3Q14657 143 aa12.91□□□□□ -0.34
RTN4-207ENST00000402434 BORCS7Q96B45 105 aa12.91□□□□□ -0.34
RTN4-207ENST00000402434 TMEM97Q5BJF2 176 aa12.91□□□□□ -0.34
RTN4-207ENST00000402434 NTM-AS1Q6ZSK4 140 aa12.91□□□□□ -0.34
RTN4-207ENST00000402434 FRZBQ92765 325 aa12.91□□□□□ -0.34
RTN4-207ENST00000402434 PKHD1P08F94 4074 aa12.9□□□□□ -0.34
RTN4-207ENST00000402434 GATD1Q8NB37 220 aa12.9□□□□□ -0.34
RTN4-207ENST00000402434 NUP35Q8NFH5 326 aa12.9□□□□□ -0.34
RTN4-207ENST00000402434 CHCHD7Q9BUK0 85 aa12.9□□□□□ -0.34
RTN4-207ENST00000402434 PKD1P98161 4303 aa12.9□□□□□ -0.34
RTN4-207ENST00000402434 SMIM27A0A1W2PRY6 76 aa12.89□□□□□ -0.35
RTN4-207ENST00000402434 NAT8BQ9UHF3 227 aa12.89□□□□□ -0.35
RTN4-207ENST00000402434 URGCP-MRPS24S4R325 110 aa12.89□□□□□ -0.35
RTN4-207ENST00000402434 TMEM191AQ9H0A3 160 aa12.88□□□□□ -0.35
RTN4-207ENST00000402434 TRAV26-2A0A0B4J265 109 aa12.87□□□□□ -0.35
RTN4-207ENST00000402434 A0A087WX48 190 aa12.86□□□□□ -0.35
RTN4-207ENST00000402434 RIGQ13278 110 aa12.86□□□□□ -0.35
RTN4-207ENST00000402434 TRAV8-3A0A0A6YYJ7 113 aa12.85□□□□□ -0.35
RTN4-207ENST00000402434 IQCJQ1A5X6 159 aa12.85□□□□□ -0.35
RTN4-207ENST00000402434 Q9HAA7 133 aa12.85□□□□□ -0.35
RTN4-207ENST00000402434 PNRC1Q12796 327 aaPredicted RBP12.85□□□□□ -0.35
RTN4-207ENST00000402434 KCNIP4Q6PIL6 250 aa12.85□□□□□ -0.35
RTN4-207ENST00000402434 TRBV25-1A0A075B6N4 114 aa12.84□□□□□ -0.35
RTN4-207ENST00000402434 PKIAP61925 76 aa12.84□□□□□ -0.35
RTN4-207ENST00000402434 RNF185Q96GF1 192 aa12.84□□□□□ -0.35
RTN4-207ENST00000402434 CHCHD5Q9BSY4 110 aa12.84□□□□□ -0.35
RTN4-207ENST00000402434 A0A087WTM6 91 aa12.83□□□□□ -0.36
RTN4-207ENST00000402434 IGHV1-24A0A0C4DH33 117 aa12.83□□□□□ -0.36
RTN4-207ENST00000402434 TMEM262E9PQX1 116 aa12.83□□□□□ -0.36
RTN4-207ENST00000402434 RAB4AP20338 218 aa12.83□□□□□ -0.36
RTN4-207ENST00000402434 ELOBQ15370 118 aa12.83□□□□□ -0.36
RTN4-207ENST00000402434 UQCC3Q6UW78 93 aa12.83□□□□□ -0.36
RTN4-207ENST00000402434 SPATA12Q7Z6I5 190 aa12.83□□□□□ -0.36
RTN4-207ENST00000402434 RPL39LQ96EH5 51 aaKnown RBP12.83□□□□□ -0.36
RTN4-207ENST00000402434 KLK12Q9UKR0 248 aa12.83□□□□□ -0.36
RTN4-207ENST00000402434 KRTAP10-2P60368 255 aa12.82□□□□□ -0.36
RTN4-207ENST00000402434 MPV17L2Q567V2 206 aa12.82□□□□□ -0.36
RTN4-207ENST00000402434 TRBV6-5A0A0K0K1A5 114 aa12.81□□□□□ -0.36
RTN4-207ENST00000402434 EREGO14944 169 aa12.81□□□□□ -0.36
RTN4-207ENST00000402434 PPP1R2P9O14990 202 aa12.81□□□□□ -0.36
RTN4-207ENST00000402434 PSCAO43653 123 aa12.81□□□□□ -0.36
RTN4-207ENST00000402434 AMN1Q8IY45 258 aa12.81□□□□□ -0.36
RTN4-207ENST00000402434 TM2D2Q9BX73 214 aa12.81□□□□□ -0.36
RTN4-207ENST00000402434 A0A1B0GW15 77 aa12.8□□□□□ -0.36
RTN4-207ENST00000402434 LRCOL1A6NCL2 159 aa12.8□□□□□ -0.36
RTN4-207ENST00000402434 GAS8-AS1O95177 125 aa12.8□□□□□ -0.36
RTN4-207ENST00000402434 ATRAIDQ6UW56 229 aa12.8□□□□□ -0.36
RTN4-207ENST00000402434 MRAP2Q96G30 205 aa12.8□□□□□ -0.36
RTN4-207ENST00000402434 COTL1Q14019 142 aa12.79□□□□□ -0.36
RTN4-207ENST00000402434 SDHAF1A6NFY7 115 aa12.78□□□□□ -0.36
RTN4-207ENST00000402434 C16orf90A8MZG2 172 aa12.78□□□□□ -0.36
RTN4-207ENST00000402434 Q8N976 141 aa12.78□□□□□ -0.36
RTN4-207ENST00000402434 TMEM243Q9BU79 118 aa12.78□□□□□ -0.36
RTN4-207ENST00000402434 TMEM218A2RU14 115 aa12.78□□□□□ -0.36
RTN4-207ENST00000402434 RBX1P62877 108 aa12.78□□□□□ -0.36
RTN4-207ENST00000402434 GAGE6Q13070 117 aa12.78□□□□□ -0.36
RTN4-207ENST00000402434 FAM104BQ5XKR9 115 aa12.78□□□□□ -0.36
RTN4-207ENST00000402434 UBE2WQ96B02 151 aa12.78□□□□□ -0.36
RTN4-207ENST00000402434 ANAPC16Q96DE5 110 aa12.78□□□□□ -0.36
RTN4-207ENST00000402434 PGPEP1Q9NXJ5 209 aa12.78□□□□□ -0.36
RTN4-207ENST00000402434 COX11Q9Y6N1 276 aa12.78□□□□□ -0.36
RTN4-207ENST00000402434 DNAH11Q96DT5 4516 aa12.77□□□□□ -0.37
RTN4-207ENST00000402434 A0A1B0GXF2 115 aa12.77□□□□□ -0.37
RTN4-207ENST00000402434 MT-ND4LP03901 98 aa12.77□□□□□ -0.37
RTN4-207ENST00000402434 RPS10P46783 165 aaKnown RBP12.77□□□□□ -0.37
RTN4-207ENST00000402434 CAMPP49913 170 aa12.77□□□□□ -0.37
RTN4-207ENST00000402434 Q0VG73 95 aa12.77□□□□□ -0.37
RTN4-207ENST00000402434 ENHOQ6UWT2 76 aa12.77□□□□□ -0.37
RTN4-207ENST00000402434 DEFB104AQ8WTQ1 72 aa12.77□□□□□ -0.37
RTN4-207ENST00000402434 RMI2Q96E14 147 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms