RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 LINC00467Q9BRT7 94 aa6.49□□□□□ -1.37
LINC01139-201ENST00000400946 KRTAP17-1Q9BYP8 105 aa6.49□□□□□ -1.37
LINC01139-201ENST00000400946 MDFICQ9P1T7 246 aa6.49□□□□□ -1.37
LINC01139-201ENST00000400946 PYGO1Q9Y3Y4 419 aa6.49□□□□□ -1.37
LINC01139-201ENST00000400946 ITPR2Q14571 2701 aa6.49□□□□□ -1.37
LINC01139-201ENST00000400946 F5H697 171 aa6.48□□□□□ -1.37
LINC01139-201ENST00000400946 I3L3M4 83 aa6.48□□□□□ -1.37
LINC01139-201ENST00000400946 TSHBP01222 138 aa6.48□□□□□ -1.37
LINC01139-201ENST00000400946 IGHV4-59P01825 116 aa6.48□□□□□ -1.37
LINC01139-201ENST00000400946 KRTAP10-9P60411 292 aa6.48□□□□□ -1.37
LINC01139-201ENST00000400946 AMTNQ6UX39 209 aa6.48□□□□□ -1.37
LINC01139-201ENST00000400946 SCGB1D4Q6XE38 83 aa6.48□□□□□ -1.37
LINC01139-201ENST00000400946 Q8N2B8 174 aa6.48□□□□□ -1.37
LINC01139-201ENST00000400946 TEX29Q8N6K0 151 aa6.48□□□□□ -1.37
LINC01139-201ENST00000400946 SPAG8Q99932 426 aaPredicted RBP6.48□□□□□ -1.37
LINC01139-201ENST00000400946 CENPEQ02224 2701 aa6.48□□□□□ -1.37
LINC01139-201ENST00000400946 NAV2Q8IVL1 2488 aa6.47□□□□□ -1.37
LINC01139-201ENST00000400946 MAST4O15021 2626 aa6.47□□□□□ -1.37
LINC01139-201ENST00000400946 APCP25054 2843 aa6.47□□□□□ -1.37
LINC01139-201ENST00000400946 IGKV3-7A0A075B6H7 116 aa6.47□□□□□ -1.37
LINC01139-201ENST00000400946 A0A0J9YY99 117 aa6.47□□□□□ -1.37
LINC01139-201ENST00000400946 ZNF688P0C7X2 276 aa6.47□□□□□ -1.37
LINC01139-201ENST00000400946 DEFB1P60022 68 aa6.47□□□□□ -1.37
LINC01139-201ENST00000400946 LRRC75A-AS1Q8N1F1 130 aa6.47□□□□□ -1.37
LINC01139-201ENST00000400946 Q8N1Y9 231 aa6.47□□□□□ -1.37
LINC01139-201ENST00000400946 SLC25A29Q8N8R3 303 aa6.47□□□□□ -1.37
LINC01139-201ENST00000400946 C20orf203Q8NBC4 194 aa6.47□□□□□ -1.37
LINC01139-201ENST00000400946 ATP6V0E2Q8NHE4 81 aa6.47□□□□□ -1.37
LINC01139-201ENST00000400946 CSMD2Q7Z408 3487 aa6.47□□□□□ -1.37
LINC01139-201ENST00000400946 MUC4Q99102 2169 aa6.47□□□□□ -1.37
LINC01139-201ENST00000400946 DCHS2Q6V1P9 2916 aa6.47□□□□□ -1.37
LINC01139-201ENST00000400946 CSMD1Q96PZ7 3565 aa6.47□□□□□ -1.37
LINC01139-201ENST00000400946 TRBV20-1A0A075B6N2 111 aa6.46□□□□□ -1.37
LINC01139-201ENST00000400946 A8MWV9 139 aa6.46□□□□□ -1.37
LINC01139-201ENST00000400946 K7ERJ3 54 aa6.46□□□□□ -1.37
LINC01139-201ENST00000400946 SCGB1A1P11684 91 aa6.46□□□□□ -1.37
LINC01139-201ENST00000400946 SRSF9Q13242 221 aaKnown RBP eCLIP6.46□□□□□ -1.37
LINC01139-201ENST00000400946 GAGE13Q4V321 117 aa6.46□□□□□ -1.37
LINC01139-201ENST00000400946 PLEKHB2Q96CS7 222 aa6.46□□□□□ -1.37
LINC01139-201ENST00000400946 CITED1Q99966 193 aa6.46□□□□□ -1.37
LINC01139-201ENST00000400946 NAA38Q9BRA0 125 aaKnown RBP6.46□□□□□ -1.37
LINC01139-201ENST00000400946 KRTAP4-9Q9BYQ8 210 aa6.46□□□□□ -1.37
LINC01139-201ENST00000400946 PEMTQ9UBM1 199 aa6.46□□□□□ -1.37
LINC01139-201ENST00000400946 PDZD2O15018 2839 aa6.46□□□□□ -1.38
LINC01139-201ENST00000400946 TEX15Q9BXT5 2789 aa6.46□□□□□ -1.38
LINC01139-201ENST00000400946 LEPROTO15243 131 aa6.45□□□□□ -1.38
LINC01139-201ENST00000400946 SAP30O75446 220 aa6.45□□□□□ -1.38
LINC01139-201ENST00000400946 SRD5A1P18405 259 aa6.45□□□□□ -1.38
LINC01139-201ENST00000400946 HOXD3P31249 432 aaPredicted RBP6.45□□□□□ -1.38
LINC01139-201ENST00000400946 ZNF56Q15929 161 aa6.45□□□□□ -1.38
LINC01139-201ENST00000400946 MORN3Q6PF18 240 aaPredicted RBP6.45□□□□□ -1.38
LINC01139-201ENST00000400946 DLX4Q92988 240 aaPredicted RBP6.45□□□□□ -1.38
LINC01139-201ENST00000400946 DNAJC30Q96LL9 226 aa6.45□□□□□ -1.38
LINC01139-201ENST00000400946 ZNF702PQ9H963 129 aa6.45□□□□□ -1.38
LINC01139-201ENST00000400946 BEX4Q9NWD9 120 aaPredicted RBP6.45□□□□□ -1.38
LINC01139-201ENST00000400946 HRNRQ86YZ3 2850 aaPredicted RBP6.45□□□□□ -1.38
LINC01139-201ENST00000400946 A0A087WWL8 130 aa6.45□□□□□ -1.38
LINC01139-201ENST00000400946 RHODO00212 210 aa6.45□□□□□ -1.38
LINC01139-201ENST00000400946 SYNJ2BPP57105 145 aa6.45□□□□□ -1.38
LINC01139-201ENST00000400946 UBE2D3P61077 147 aa6.45□□□□□ -1.38
LINC01139-201ENST00000400946 UBE2D2P62837 147 aa6.45□□□□□ -1.38
LINC01139-201ENST00000400946 CD300EQ496F6 205 aaPredicted RBP6.45□□□□□ -1.38
LINC01139-201ENST00000400946 TMEM86BQ8N661 226 aa6.45□□□□□ -1.38
LINC01139-201ENST00000400946 KRTAP4-2Q9BYR5 136 aa6.45□□□□□ -1.38
LINC01139-201ENST00000400946 NOTCH2Q04721 2471 aa6.44□□□□□ -1.38
LINC01139-201ENST00000400946 TMEM223A0PJW6 202 aa6.44□□□□□ -1.38
LINC01139-201ENST00000400946 J3QQQ9 107 aa6.44□□□□□ -1.38
LINC01139-201ENST00000400946 M0QXV9 152 aa6.44□□□□□ -1.38
LINC01139-201ENST00000400946 SPRY2O43597 315 aa6.44□□□□□ -1.38
LINC01139-201ENST00000400946 LGALS3P17931 250 aaKnown RBP6.44□□□□□ -1.38
LINC01139-201ENST00000400946 ZNF415Q09FC8 603 aa6.44□□□□□ -1.38
LINC01139-201ENST00000400946 SPINK13Q1W4C9 94 aa6.44□□□□□ -1.38
LINC01139-201ENST00000400946 TCTEX1D4Q5JR98 221 aa6.44□□□□□ -1.38
LINC01139-201ENST00000400946 C1orf43Q9BWL3 253 aa6.44□□□□□ -1.38
LINC01139-201ENST00000400946 JPT2Q9H910 190 aa6.44□□□□□ -1.38
LINC01139-201ENST00000400946 MRPL16Q9NX20 251 aaKnown RBP6.44□□□□□ -1.38
LINC01139-201ENST00000400946 PRO0461Q9UI25 63 aa6.44□□□□□ -1.38
LINC01139-201ENST00000400946 ABCA12Q86UK0 2595 aa6.43□□□□□ -1.38
LINC01139-201ENST00000400946 LRBAP50851 2863 aa6.43□□□□□ -1.38
LINC01139-201ENST00000400946 TRAV25A0A0B4J276 109 aa6.43□□□□□ -1.38
LINC01139-201ENST00000400946 TEX48A0A1B0GUV7 120 aa6.43□□□□□ -1.38
LINC01139-201ENST00000400946 H3BMG7 143 aa6.43□□□□□ -1.38
LINC01139-201ENST00000400946 M0R2P5 195 aa6.43□□□□□ -1.38
LINC01139-201ENST00000400946 IGHV3-30P01768 117 aa6.43□□□□□ -1.38
LINC01139-201ENST00000400946 P0DMU3 169 aa6.43□□□□□ -1.38
LINC01139-201ENST00000400946 FAM231AP0DMU4 169 aa6.43□□□□□ -1.38
LINC01139-201ENST00000400946 FAM231CP0DMU5 169 aa6.43□□□□□ -1.38
LINC01139-201ENST00000400946 IGHV3-30-5P0DP03 117 aa6.43□□□□□ -1.38
LINC01139-201ENST00000400946 EDN2P20800 178 aa6.43□□□□□ -1.38
LINC01139-201ENST00000400946 RPL24P83731 157 aaKnown RBP6.43□□□□□ -1.38
LINC01139-201ENST00000400946 TMEM170BQ5T4T1 132 aa6.43□□□□□ -1.38
LINC01139-201ENST00000400946 FAM74A4Q5TZK3 123 aa6.43□□□□□ -1.38
LINC01139-201ENST00000400946 NDUFA11Q86Y39 141 aa6.43□□□□□ -1.38
LINC01139-201ENST00000400946 ZNRF2Q8NHG8 242 aa6.43□□□□□ -1.38
LINC01139-201ENST00000400946 NRGNQ92686 78 aa6.43□□□□□ -1.38
LINC01139-201ENST00000400946 AMELXQ99217 191 aa6.43□□□□□ -1.38
LINC01139-201ENST00000400946 SPANXA1Q9NS26 97 aa6.43□□□□□ -1.38
LINC01139-201ENST00000400946 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.42□□□□□ -1.38
LINC01139-201ENST00000400946 A0A0B4J2C4 111 aa6.42□□□□□ -1.38
LINC01139-201ENST00000400946 TMEM238C9JI98 176 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms