RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 DAZ4Q86SG3 579 aaKnown RBP5.66□□□□□ -1.5
USP16-202ENST00000399973 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.66□□□□□ -1.5
USP16-202ENST00000399973 NEXN-AS1Q8NBZ9 246 aa5.66□□□□□ -1.5
USP16-202ENST00000399973 NUDT10Q8NFP7 164 aa5.66□□□□□ -1.5
USP16-202ENST00000399973 NUDT11Q96G61 164 aa5.66□□□□□ -1.5
USP16-202ENST00000399973 DAZ3Q9NR90 486 aaKnown RBP5.66□□□□□ -1.5
USP16-202ENST00000399973 PCLOQ9Y6V0 5065 aa5.65□□□□□ -1.5
USP16-202ENST00000399973 A0A087WX48 190 aa5.65□□□□□ -1.5
USP16-202ENST00000399973 TMEM250H0YL14 139 aa5.65□□□□□ -1.5
USP16-202ENST00000399973 TRGC1P0CF51 173 aa5.65□□□□□ -1.5
USP16-202ENST00000399973 LAGE3Q14657 143 aa5.65□□□□□ -1.5
USP16-202ENST00000399973 SUMO4Q6EEV6 95 aa5.65□□□□□ -1.5
USP16-202ENST00000399973 OCC1Q8TAD7 63 aa5.65□□□□□ -1.5
USP16-202ENST00000399973 SMIM7Q9BQ49 75 aa5.65□□□□□ -1.5
USP16-202ENST00000399973 F2Z2F3 143 aa5.64□□□□□ -1.51
USP16-202ENST00000399973 GATCO43716 136 aaKnown RBP5.64□□□□□ -1.51
USP16-202ENST00000399973 CTRLP40313 264 aa5.64□□□□□ -1.51
USP16-202ENST00000399973 TWIST1Q15672 202 aa5.64□□□□□ -1.51
USP16-202ENST00000399973 NIT1Q86X76 327 aa5.64□□□□□ -1.51
USP16-202ENST00000399973 OR10G8Q8NGN5 311 aa5.64□□□□□ -1.51
USP16-202ENST00000399973 FAM210AQ96ND0 272 aa5.64□□□□□ -1.51
USP16-202ENST00000399973 CHCHD5Q9BSY4 110 aa5.64□□□□□ -1.51
USP16-202ENST00000399973 KLK12Q9UKR0 248 aa5.64□□□□□ -1.51
USP16-202ENST00000399973 KIF25-AS1Q9Y6Z4 181 aa5.64□□□□□ -1.51
USP16-202ENST00000399973 DNAH5Q8TE73 4624 aa5.64□□□□□ -1.51
USP16-202ENST00000399973 TRBV6-8A0A0A6YYG3 113 aa5.63□□□□□ -1.51
USP16-202ENST00000399973 TRAV8-3A0A0A6YYJ7 113 aa5.63□□□□□ -1.51
USP16-202ENST00000399973 ZNF727A8MUV8 499 aa5.63□□□□□ -1.51
USP16-202ENST00000399973 TMEM262E9PQX1 116 aa5.63□□□□□ -1.51
USP16-202ENST00000399973 H7C1H1 209 aa5.63□□□□□ -1.51
USP16-202ENST00000399973 LECT2O14960 151 aa5.63□□□□□ -1.51
USP16-202ENST00000399973 CDK2AP2O75956 126 aa5.63□□□□□ -1.51
USP16-202ENST00000399973 CRPP02741 224 aa5.63□□□□□ -1.51
USP16-202ENST00000399973 NTF3P20783 257 aa5.63□□□□□ -1.51
USP16-202ENST00000399973 CDPF1Q6NVV7 123 aa5.63□□□□□ -1.51
USP16-202ENST00000399973 MAPKAPK5-AS1Q8N8E1 139 aa5.63□□□□□ -1.51
USP16-202ENST00000399973 LYPD6BQ8NI32 183 aa5.63□□□□□ -1.51
USP16-202ENST00000399973 UBE2WQ96B02 151 aa5.63□□□□□ -1.51
USP16-202ENST00000399973 TM2D2Q9BX73 214 aa5.63□□□□□ -1.51
USP16-202ENST00000399973 DPH3P1Q9H4G8 78 aa5.63□□□□□ -1.51
USP16-202ENST00000399973 ABCA13Q86UQ4 5058 aa5.62□□□□□ -1.51
USP16-202ENST00000399973 LRP1BQ9NZR2 4599 aa5.62□□□□□ -1.51
USP16-202ENST00000399973 IGKV2D-24A0A075B6R9 120 aa5.62□□□□□ -1.51
USP16-202ENST00000399973 IGLV5-52A0A0A0MRZ9 124 aa5.62□□□□□ -1.51
USP16-202ENST00000399973 SRP19P09132 144 aaKnown RBP5.62□□□□□ -1.51
USP16-202ENST00000399973 MPV17L2Q567V2 206 aa5.62□□□□□ -1.51
USP16-202ENST00000399973 RASL11AQ6T310 242 aa5.62□□□□□ -1.51
USP16-202ENST00000399973 SMIM15Q7Z3B0 74 aa5.62□□□□□ -1.51
USP16-202ENST00000399973 C15orf54Q8N8G6 183 aa5.62□□□□□ -1.51
USP16-202ENST00000399973 DEFB104AQ8WTQ1 72 aa5.62□□□□□ -1.51
USP16-202ENST00000399973 GTSF1Q8WW33 167 aa5.62□□□□□ -1.51
USP16-202ENST00000399973 BORCS7Q96B45 105 aa5.62□□□□□ -1.51
USP16-202ENST00000399973 RMI2Q96E14 147 aa5.62□□□□□ -1.51
USP16-202ENST00000399973 PGLYRP4Q96LB8 373 aa5.62□□□□□ -1.51
USP16-202ENST00000399973 DNAJC30Q96LL9 226 aa5.62□□□□□ -1.51
USP16-202ENST00000399973 TRBV25-1A0A075B6N4 114 aa5.61□□□□□ -1.51
USP16-202ENST00000399973 TRAV26-2A0A0B4J265 109 aa5.61□□□□□ -1.51
USP16-202ENST00000399973 LRCOL1A6NCL2 159 aa5.61□□□□□ -1.51
USP16-202ENST00000399973 M0QY20 66 aa5.61□□□□□ -1.51
USP16-202ENST00000399973 ANGP03950 147 aaKnown RBP5.61□□□□□ -1.51
USP16-202ENST00000399973 APOBP04114 4563 aaKnown RBP5.61□□□□□ -1.51
USP16-202ENST00000399973 GAGE6Q13070 117 aa5.61□□□□□ -1.51
USP16-202ENST00000399973 WFDC2Q14508 124 aa5.61□□□□□ -1.51
USP16-202ENST00000399973 ELOBQ15370 118 aa5.61□□□□□ -1.51
USP16-202ENST00000399973 TMEM97Q5BJF2 176 aa5.61□□□□□ -1.51
USP16-202ENST00000399973 CLPSL2Q6UWE3 100 aa5.61□□□□□ -1.51
USP16-202ENST00000399973 FAM231DQ6ZW35 169 aa5.61□□□□□ -1.51
USP16-202ENST00000399973 Q8N814 137 aa5.61□□□□□ -1.51
USP16-202ENST00000399973 CHCHD7Q9BUK0 85 aa5.61□□□□□ -1.51
USP16-202ENST00000399973 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.6□□□□□ -1.51
USP16-202ENST00000399973 IGHV1-24A0A0C4DH33 117 aa5.6□□□□□ -1.51
USP16-202ENST00000399973 A8MWL6 223 aa5.6□□□□□ -1.51
USP16-202ENST00000399973 PKIAP61925 76 aa5.6□□□□□ -1.51
USP16-202ENST00000399973 ADIRFQ15847 76 aa5.6□□□□□ -1.51
USP16-202ENST00000399973 TEX261Q6UWH6 196 aa5.6□□□□□ -1.51
USP16-202ENST00000399973 NTM-AS1Q6ZSK4 140 aa5.6□□□□□ -1.51
USP16-202ENST00000399973 LINC01551Q86U37 167 aa5.6□□□□□ -1.51
USP16-202ENST00000399973 Q8N976 141 aa5.6□□□□□ -1.51
USP16-202ENST00000399973 BAALCQ8WXS3 180 aa5.6□□□□□ -1.51
USP16-202ENST00000399973 CNFNQ9BYD5 112 aa5.6□□□□□ -1.51
USP16-202ENST00000399973 HSPG2P98160 4391 aa5.59□□□□□ -1.51
USP16-202ENST00000399973 HLA-DQA1P01909 254 aa5.59□□□□□ -1.51
USP16-202ENST00000399973 GCSHP23434 173 aa5.59□□□□□ -1.51
USP16-202ENST00000399973 KRTAP10-1P60331 282 aa5.59□□□□□ -1.51
USP16-202ENST00000399973 HAMPP81172 84 aa5.59□□□□□ -1.51
USP16-202ENST00000399973 CT83Q5H943 113 aa5.59□□□□□ -1.51
USP16-202ENST00000399973 WDR73Q6P4I2 378 aa5.59□□□□□ -1.51
USP16-202ENST00000399973 ATRAIDQ6UW56 229 aa5.59□□□□□ -1.51
USP16-202ENST00000399973 NTN5Q8WTR8 489 aaPredicted RBP5.59□□□□□ -1.51
USP16-202ENST00000399973 C1orf43Q9BWL3 253 aa5.59□□□□□ -1.51
USP16-202ENST00000399973 NIT2Q9NQR4 276 aa5.59□□□□□ -1.51
USP16-202ENST00000399973 COX11Q9Y6N1 276 aa5.59□□□□□ -1.51
USP16-202ENST00000399973 HIGD1CA8MV81 97 aa5.58□□□□□ -1.52
USP16-202ENST00000399973 UBE2L6O14933 153 aa5.58□□□□□ -1.52
USP16-202ENST00000399973 AMTP48728 403 aa5.58□□□□□ -1.52
USP16-202ENST00000399973 FOXA3P55318 350 aaPredicted RBP5.58□□□□□ -1.52
USP16-202ENST00000399973 RBX1P62877 108 aa5.58□□□□□ -1.52
USP16-202ENST00000399973 SRSF3P84103 164 aaKnown RBP5.58□□□□□ -1.52
USP16-202ENST00000399973 Q0VG73 95 aa5.58□□□□□ -1.52
USP16-202ENST00000399973 COTL1Q14019 142 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms