RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 KIR3DS1Q14943 382 aa5.98□□□□□ -1.45
USP47-203ENST00000399455 ZFAND2AQ8N6M9 145 aa5.98□□□□□ -1.45
USP47-203ENST00000399455 SPANXDQ9BXN6 97 aa5.98□□□□□ -1.45
USP47-203ENST00000399455 NANOS2P60321 138 aaKnown RBP5.98□□□□□ -1.45
USP47-203ENST00000399455 TRBV6-4A0A1B0GX49 114 aa5.98□□□□□ -1.45
USP47-203ENST00000399455 PRO1854Q9UHT4 67 aa5.98□□□□□ -1.45
USP47-203ENST00000399455 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.97□□□□□ -1.45
USP47-203ENST00000399455 HAMPP81172 84 aa5.97□□□□□ -1.45
USP47-203ENST00000399455 MAJINQ3KP22 176 aa5.97□□□□□ -1.45
USP47-203ENST00000399455 CHKB-CPT1BH3BT56 60 aa5.97□□□□□ -1.45
USP47-203ENST00000399455 PRB2P02812 416 aaPredicted RBP5.97□□□□□ -1.45
USP47-203ENST00000399455 C22orf34Q6ZV56 151 aa5.97□□□□□ -1.45
USP47-203ENST00000399455 CHCHD10Q8WYQ3 142 aaPredicted RBP5.97□□□□□ -1.45
USP47-203ENST00000399455 ZNF124Q15973 351 aa5.97□□□□□ -1.45
USP47-203ENST00000399455 PATE2Q6UY27 113 aa5.97□□□□□ -1.45
USP47-203ENST00000399455 CRYGBP07316 175 aa5.97□□□□□ -1.45
USP47-203ENST00000399455 TOMM6Q96B49 74 aa5.97□□□□□ -1.45
USP47-203ENST00000399455 CITED1Q99966 193 aa5.97□□□□□ -1.45
USP47-203ENST00000399455 FAM19A1Q7Z5A9 133 aa5.96□□□□□ -1.45
USP47-203ENST00000399455 IGLV5-52A0A0A0MRZ9 124 aa5.96□□□□□ -1.45
USP47-203ENST00000399455 LELP1Q5T871 98 aa5.96□□□□□ -1.45
USP47-203ENST00000399455 LOC107984640A0A0U1RRK4 108 aa5.96□□□□□ -1.46
USP47-203ENST00000399455 IGLV1-40P01703 118 aa5.96□□□□□ -1.46
USP47-203ENST00000399455 CEND1Q8N111 149 aa5.96□□□□□ -1.46
USP47-203ENST00000399455 COX7BP24311 80 aa5.96□□□□□ -1.46
USP47-203ENST00000399455 C1orf134Q5TEV5 83 aa5.96□□□□□ -1.46
USP47-203ENST00000399455 TRACP01848 142 aa5.95□□□□□ -1.46
USP47-203ENST00000399455 CTRLP40313 264 aa5.95□□□□□ -1.46
USP47-203ENST00000399455 UBE2D3P61077 147 aa5.95□□□□□ -1.46
USP47-203ENST00000399455 K7EN84 100 aa5.95□□□□□ -1.46
USP47-203ENST00000399455 RS1O15537 224 aa5.95□□□□□ -1.46
USP47-203ENST00000399455 ZNF295-AS1Q8N0V1 137 aa5.95□□□□□ -1.46
USP47-203ENST00000399455 LYPD6BQ8NI32 183 aa5.95□□□□□ -1.46
USP47-203ENST00000399455 ALPK2Q86TB3 2170 aa5.95□□□□□ -1.46
USP47-203ENST00000399455 RIF1Q5UIP0 2472 aaKnown RBP5.95□□□□□ -1.46
USP47-203ENST00000399455 FRMD6-AS1P0C7T7 363 aa5.95□□□□□ -1.46
USP47-203ENST00000399455 IGLV2-14P01704 120 aa5.95□□□□□ -1.46
USP47-203ENST00000399455 E7EUB6 86 aa5.95□□□□□ -1.46
USP47-203ENST00000399455 MRPL52Q86TS9 123 aaKnown RBP5.95□□□□□ -1.46
USP47-203ENST00000399455 Q8N6K4 173 aa5.95□□□□□ -1.46
USP47-203ENST00000399455 CDSNQ15517 529 aa5.94□□□□□ -1.46
USP47-203ENST00000399455 LINC01620Q4KN68 170 aa5.94□□□□□ -1.46
USP47-203ENST00000399455 TRAV12-1A0A0B4J245 112 aa5.94□□□□□ -1.46
USP47-203ENST00000399455 COLCA2A8K830 154 aa5.94□□□□□ -1.46
USP47-203ENST00000399455 OCIAD2Q56VL3 154 aa5.94□□□□□ -1.46
USP47-203ENST00000399455 MORN5Q5VZ52 161 aa5.94□□□□□ -1.46
USP47-203ENST00000399455 ATRAIDQ6UW56 229 aa5.94□□□□□ -1.46
USP47-203ENST00000399455 FAM167A-AS1Q96KT0 104 aa5.94□□□□□ -1.46
USP47-203ENST00000399455 TRBV6-8A0A0A6YYG3 113 aa5.94□□□□□ -1.46
USP47-203ENST00000399455 C18orf65Q6ZTR6 163 aa5.94□□□□□ -1.46
USP47-203ENST00000399455 SYCNQ0VAF6 134 aa5.93□□□□□ -1.46
USP47-203ENST00000399455 C10orf99Q6UWK7 81 aa5.93□□□□□ -1.46
USP47-203ENST00000399455 FAM19A5Q7Z5A7 132 aaPredicted RBP5.93□□□□□ -1.46
USP47-203ENST00000399455 ANAPC13Q9BS18 74 aa5.93□□□□□ -1.46
USP47-203ENST00000399455 TINCRA0A1B0GVN0 87 aa5.93□□□□□ -1.46
USP47-203ENST00000399455 TP53TG3Q9ULZ0 132 aa5.93□□□□□ -1.46
USP47-203ENST00000399455 RAI1Q7Z5J4 1906 aaPredicted RBP5.93□□□□□ -1.46
USP47-203ENST00000399455 CFAP126Q5VTH2 177 aa5.93□□□□□ -1.46
USP47-203ENST00000399455 NPSP0C0P6 89 aa5.93□□□□□ -1.46
USP47-203ENST00000399455 SIGMAR1Q99720 223 aa5.93□□□□□ -1.46
USP47-203ENST00000399455 MSRB1Q9NZV6 116 aa5.93□□□□□ -1.46
USP47-203ENST00000399455 IGKV2D-26A0A0A0MRZ7 120 aa5.92□□□□□ -1.46
USP47-203ENST00000399455 C20orf173Q96LM9 149 aa5.92□□□□□ -1.46
USP47-203ENST00000399455 C11orf86A6NJI1 115 aa5.92□□□□□ -1.46
USP47-203ENST00000399455 COX8AP10176 69 aa5.92□□□□□ -1.46
USP47-203ENST00000399455 DEFB1P60022 68 aa5.92□□□□□ -1.46
USP47-203ENST00000399455 BBC3Q96PG8 261 aaPredicted RBP5.92□□□□□ -1.46
USP47-203ENST00000399455 H0Y9J4 135 aa5.92□□□□□ -1.46
USP47-203ENST00000399455 BAALCQ8WXS3 180 aa5.92□□□□□ -1.46
USP47-203ENST00000399455 HIGD2AQ9BW72 106 aa5.92□□□□□ -1.46
USP47-203ENST00000399455 A4D1N5 150 aa5.92□□□□□ -1.46
USP47-203ENST00000399455 GATA1P15976 413 aaPredicted RBP5.92□□□□□ -1.46
USP47-203ENST00000399455 ANKRD29Q8N6D5 301 aa5.92□□□□□ -1.46
USP47-203ENST00000399455 ZFAND3Q9H8U3 227 aa5.92□□□□□ -1.46
USP47-203ENST00000399455 IGLV4-69A0A075B6H9 119 aa5.92□□□□□ -1.46
USP47-203ENST00000399455 CLUHP3Q96NS8 147 aa5.91□□□□□ -1.46
USP47-203ENST00000399455 A0A0J9YXV3 536 aa5.91□□□□□ -1.46
USP47-203ENST00000399455 BAALC-AS2P0C853 105 aa5.91□□□□□ -1.46
USP47-203ENST00000399455 NREPQ16612 68 aa5.91□□□□□ -1.46
USP47-203ENST00000399455 ARFGEF3Q5TH69 2177 aa5.91□□□□□ -1.46
USP47-203ENST00000399455 SPTBN1Q01082 2364 aaKnown RBP5.91□□□□□ -1.46
USP47-203ENST00000399455 DKK2Q9UBU2 259 aa5.91□□□□□ -1.46
USP47-203ENST00000399455 NEXN-AS1Q8NBZ9 246 aa5.91□□□□□ -1.46
USP47-203ENST00000399455 C10orf142B7Z368 130 aa5.9□□□□□ -1.46
USP47-203ENST00000399455 MP68P56378 58 aa5.9□□□□□ -1.46
USP47-203ENST00000399455 ZNF580Q9UK33 172 aa5.9□□□□□ -1.46
USP47-203ENST00000399455 ASPHD1Q5U4P2 390 aa5.9□□□□□ -1.46
USP47-203ENST00000399455 C20orf203Q8NBC4 194 aa5.9□□□□□ -1.46
USP47-203ENST00000399455 MED12LQ86YW9 2145 aa5.9□□□□□ -1.46
USP47-203ENST00000399455 RPL39P62891 51 aaKnown RBP5.9□□□□□ -1.46
USP47-203ENST00000399455 Q6ZUT4 128 aa5.9□□□□□ -1.46
USP47-203ENST00000399455 MALRD1Q5VYJ5 2156 aa5.9□□□□□ -1.46
USP47-203ENST00000399455 IGLV1-51P01701 117 aa5.9□□□□□ -1.47
USP47-203ENST00000399455 SEC61GP60059 68 aa5.9□□□□□ -1.47
USP47-203ENST00000399455 CPAMD8Q8IZJ3 1885 aa5.9□□□□□ -1.47
USP47-203ENST00000399455 CEP250Q9BV73 2442 aa5.9□□□□□ -1.47
USP47-203ENST00000399455 SPTBN2O15020 2390 aa5.9□□□□□ -1.47
USP47-203ENST00000399455 IGKV1D-37A0A075B6S9 117 aa5.9□□□□□ -1.47
USP47-203ENST00000399455 TNRC6BQ9UPQ9 1833 aaKnown RBP5.89□□□□□ -1.47
USP47-203ENST00000399455 WNK2Q9Y3S1 2297 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms