RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 C1orf43Q9BWL3 253 aa5.67□□□□□ -1.5
CAPN3-208ENST00000397204 NKX6-2Q9C056 277 aaPredicted RBP5.67□□□□□ -1.5
CAPN3-208ENST00000397204 ACTR3CQ9C0K3 210 aaPredicted RBP5.67□□□□□ -1.5
CAPN3-208ENST00000397204 TNFSF18Q9UNG2 199 aa5.67□□□□□ -1.5
CAPN3-208ENST00000397204 ARL2-SNX15V9GYD0 113 aa5.67□□□□□ -1.5
CAPN3-208ENST00000397204 TRBV7-3A0A075B6L6 115 aa5.66□□□□□ -1.5
CAPN3-208ENST00000397204 TRAV34A0A0B4J273 112 aa5.66□□□□□ -1.5
CAPN3-208ENST00000397204 IFNA7P01567 189 aa5.66□□□□□ -1.5
CAPN3-208ENST00000397204 ATP6V0CP27449 155 aa5.66□□□□□ -1.5
CAPN3-208ENST00000397204 CRIP1P50238 77 aa5.66□□□□□ -1.5
CAPN3-208ENST00000397204 FAM74A4Q5TZK3 123 aa5.66□□□□□ -1.5
CAPN3-208ENST00000397204 ENHOQ6UWT2 76 aa5.66□□□□□ -1.5
CAPN3-208ENST00000397204 HSD17B11Q8NBQ5 300 aa5.66□□□□□ -1.5
CAPN3-208ENST00000397204 HIST1H2BAQ96A08 127 aa5.66□□□□□ -1.5
CAPN3-208ENST00000397204 DAZAP1Q96EP5 407 aaKnown RBP5.66□□□□□ -1.5
CAPN3-208ENST00000397204 ZFP30Q9Y2G7 519 aa5.66□□□□□ -1.5
CAPN3-208ENST00000397204 PHLDA3Q9Y5J5 127 aa5.66□□□□□ -1.5
CAPN3-208ENST00000397204 LRP2P98164 4655 aa5.66□□□□□ -1.5
CAPN3-208ENST00000397204 TRBV6-8A0A0A6YYG3 113 aa5.65□□□□□ -1.5
CAPN3-208ENST00000397204 GRIFINA4D1Z8 144 aa5.65□□□□□ -1.5
CAPN3-208ENST00000397204 H3BVH4 76 aa5.65□□□□□ -1.5
CAPN3-208ENST00000397204 UBE2D3P61077 147 aa5.65□□□□□ -1.5
CAPN3-208ENST00000397204 RAB14P61106 215 aa5.65□□□□□ -1.5
CAPN3-208ENST00000397204 PKIAP61925 76 aa5.65□□□□□ -1.5
CAPN3-208ENST00000397204 UBE2D2P62837 147 aa5.65□□□□□ -1.5
CAPN3-208ENST00000397204 IFITM3Q01628 133 aa5.65□□□□□ -1.5
CAPN3-208ENST00000397204 CT83Q5H943 113 aa5.65□□□□□ -1.5
CAPN3-208ENST00000397204 C9orf163Q8N9P6 203 aa5.65□□□□□ -1.5
CAPN3-208ENST00000397204 CLRN3Q8NCR9 226 aa5.65□□□□□ -1.5
CAPN3-208ENST00000397204 PKHD1L1Q86WI1 4243 aa5.65□□□□□ -1.51
CAPN3-208ENST00000397204 A0A087WWL8 130 aa5.64□□□□□ -1.51
CAPN3-208ENST00000397204 M0R036 132 aa5.64□□□□□ -1.51
CAPN3-208ENST00000397204 CRPP02741 224 aa5.64□□□□□ -1.51
CAPN3-208ENST00000397204 TPT1P13693 172 aaKnown RBP5.64□□□□□ -1.51
CAPN3-208ENST00000397204 MIAQ16674 131 aa5.64□□□□□ -1.51
CAPN3-208ENST00000397204 FAM162BQ5T6X4 162 aa5.64□□□□□ -1.51
CAPN3-208ENST00000397204 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-208ENST00000397204 OR10G8Q8NGN5 311 aa5.64□□□□□ -1.51
CAPN3-208ENST00000397204 ZC2HC1AQ96GY0 325 aa5.64□□□□□ -1.51
CAPN3-208ENST00000397204 AQP10Q96PS8 301 aa5.64□□□□□ -1.51
CAPN3-208ENST00000397204 USP17L23D6RBM5 183 aa5.63□□□□□ -1.51
CAPN3-208ENST00000397204 M0R381 172 aa5.63□□□□□ -1.51
CAPN3-208ENST00000397204 PEX7O00628 323 aa5.63□□□□□ -1.51
CAPN3-208ENST00000397204 SH2D1AO60880 128 aa5.63□□□□□ -1.51
CAPN3-208ENST00000397204 ANGP03950 147 aaKnown RBP5.63□□□□□ -1.51
CAPN3-208ENST00000397204 PRSS1P07477 247 aa5.63□□□□□ -1.51
CAPN3-208ENST00000397204 DEFA1P59665 94 aa5.63□□□□□ -1.51
CAPN3-208ENST00000397204 DEFA3P59666 94 aa5.63□□□□□ -1.51
CAPN3-208ENST00000397204 RAB4BP61018 213 aa5.63□□□□□ -1.51
CAPN3-208ENST00000397204 SDIM1Q6ZPB5 146 aa5.63□□□□□ -1.51
CAPN3-208ENST00000397204 Q6ZRU5 148 aa5.63□□□□□ -1.51
CAPN3-208ENST00000397204 ZFP82Q8N141 532 aa5.63□□□□□ -1.51
CAPN3-208ENST00000397204 C15orf54Q8N8G6 183 aa5.63□□□□□ -1.51
CAPN3-208ENST00000397204 A0A0D9SG52 128 aa5.62□□□□□ -1.51
CAPN3-208ENST00000397204 TRBV6-1A0A0K0K1D8 114 aa5.62□□□□□ -1.51
CAPN3-208ENST00000397204 CTXND1A0A1B0GTU2 59 aa5.62□□□□□ -1.51
CAPN3-208ENST00000397204 A4D1N5 150 aa5.62□□□□□ -1.51
CAPN3-208ENST00000397204 HNRNPA3P51991 378 aaKnown RBP5.62□□□□□ -1.51
CAPN3-208ENST00000397204 RPL19P84098 196 aaKnown RBP5.62□□□□□ -1.51
CAPN3-208ENST00000397204 MPV17L2Q567V2 206 aa5.62□□□□□ -1.51
CAPN3-208ENST00000397204 TMEM97Q5BJF2 176 aa5.62□□□□□ -1.51
CAPN3-208ENST00000397204 Q86TA4 180 aa5.62□□□□□ -1.51
CAPN3-208ENST00000397204 FMC1Q96HJ9 113 aa5.62□□□□□ -1.51
CAPN3-208ENST00000397204 PRR34Q9NV39 138 aa5.62□□□□□ -1.51
CAPN3-208ENST00000397204 TMSB15BA0A087X1C1 80 aa5.61□□□□□ -1.51
CAPN3-208ENST00000397204 FAM74A7A6NL05 159 aa5.61□□□□□ -1.51
CAPN3-208ENST00000397204 GATCO43716 136 aaKnown RBP5.61□□□□□ -1.51
CAPN3-208ENST00000397204 MT1HL1P0DM35 61 aa5.61□□□□□ -1.51
CAPN3-208ENST00000397204 UBE2G2P60604 165 aa5.61□□□□□ -1.51
CAPN3-208ENST00000397204 UBE2G1P62253 170 aa5.61□□□□□ -1.51
CAPN3-208ENST00000397204 ZNF726P1Q15940 193 aa5.61□□□□□ -1.51
CAPN3-208ENST00000397204 PRR27Q6MZM9 219 aa5.61□□□□□ -1.51
CAPN3-208ENST00000397204 NEXN-AS1Q8NBZ9 246 aa5.61□□□□□ -1.51
CAPN3-208ENST00000397204 TCEAL7Q9BRU2 100 aa5.61□□□□□ -1.51
CAPN3-208ENST00000397204 CHCHD5Q9BSY4 110 aa5.61□□□□□ -1.51
CAPN3-208ENST00000397204 BORCS7-ASMTA0A0B4J1R7 106 aa5.6□□□□□ -1.51
CAPN3-208ENST00000397204 SCGB1D1O95968 90 aa5.6□□□□□ -1.51
CAPN3-208ENST00000397204 PTTG1O95997 202 aa5.6□□□□□ -1.51
CAPN3-208ENST00000397204 LTAP01374 205 aa5.6□□□□□ -1.51
CAPN3-208ENST00000397204 HLA-DQA1P01909 254 aa5.6□□□□□ -1.51
CAPN3-208ENST00000397204 FHITP49789 147 aa5.6□□□□□ -1.51
CAPN3-208ENST00000397204 PTTG1IPP53801 180 aa5.6□□□□□ -1.51
CAPN3-208ENST00000397204 KRTAP26-1Q6PEX3 210 aa5.6□□□□□ -1.51
CAPN3-208ENST00000397204 INO80EQ8NBZ0 244 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-208ENST00000397204 DPH3Q96FX2 82 aa5.6□□□□□ -1.51
CAPN3-208ENST00000397204 RNF185Q96GF1 192 aa5.6□□□□□ -1.51
CAPN3-208ENST00000397204 ZNF471Q9BX82 626 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-208ENST00000397204 VAX2Q9UIW0 290 aa5.6□□□□□ -1.51
CAPN3-208ENST00000397204 PANO1I0J062 215 aa5.59□□□□□ -1.51
CAPN3-208ENST00000397204 CXCL1P09341 107 aa5.59□□□□□ -1.51
CAPN3-208ENST00000397204 CNBPP62633 177 aaKnown RBP5.59□□□□□ -1.51
CAPN3-208ENST00000397204 RBX1P62877 108 aa5.59□□□□□ -1.51
CAPN3-208ENST00000397204 CIRBPQ14011 172 aaKnown RBP5.59□□□□□ -1.51
CAPN3-208ENST00000397204 RPL7L1Q6DKI1 246 aaKnown RBP5.59□□□□□ -1.51
CAPN3-208ENST00000397204 PET117Q6UWS5 81 aa5.59□□□□□ -1.51
CAPN3-208ENST00000397204 NTM-AS1Q6ZSK4 140 aa5.59□□□□□ -1.51
CAPN3-208ENST00000397204 LINC00269Q8N2A0 174 aa5.59□□□□□ -1.51
CAPN3-208ENST00000397204 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.58□□□□□ -1.52
CAPN3-208ENST00000397204 TRAV8-4A0A0B4J246 113 aa5.58□□□□□ -1.52
CAPN3-208ENST00000397204 F5H697 171 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms