RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 RPL36AP83881 106 aaKnown RBP7.66□□□□□ -1.18
HLA-DQA1-203ENST00000395363 LAGE3Q14657 143 aa7.66□□□□□ -1.18
HLA-DQA1-203ENST00000395363 MPV17L2Q567V2 206 aa7.66□□□□□ -1.18
HLA-DQA1-203ENST00000395363 CLPSL2Q6UWE3 100 aa7.66□□□□□ -1.18
HLA-DQA1-203ENST00000395363 C9orf62Q8N4C0 152 aa7.66□□□□□ -1.18
HLA-DQA1-203ENST00000395363 OR2D3Q8NGH3 330 aa7.66□□□□□ -1.18
HLA-DQA1-203ENST00000395363 RPL36ALQ969Q0 106 aaKnown RBP7.66□□□□□ -1.18
HLA-DQA1-203ENST00000395363 UBE2WQ96B02 151 aa7.66□□□□□ -1.18
HLA-DQA1-203ENST00000395363 SSBP4Q9BWG4 385 aaPredicted RBP7.66□□□□□ -1.18
HLA-DQA1-203ENST00000395363 KIF25-AS1Q9Y6Z4 181 aa7.66□□□□□ -1.18
HLA-DQA1-203ENST00000395363 TRBV7-3A0A075B6L6 115 aa7.65□□□□□ -1.18
HLA-DQA1-203ENST00000395363 C19orf71A6NCJ1 209 aa7.65□□□□□ -1.18
HLA-DQA1-203ENST00000395363 OR5AL1P0C617 328 aa7.65□□□□□ -1.18
HLA-DQA1-203ENST00000395363 BCL2P10415 239 aa7.65□□□□□ -1.18
HLA-DQA1-203ENST00000395363 NKX2-5P52952 324 aaPredicted RBP7.65□□□□□ -1.18
HLA-DQA1-203ENST00000395363 MEF2BQ02080 365 aaPredicted RBP7.65□□□□□ -1.18
HLA-DQA1-203ENST00000395363 XP32Q5T750 250 aa7.65□□□□□ -1.18
HLA-DQA1-203ENST00000395363 NTM-AS1Q6ZSK4 140 aa7.65□□□□□ -1.18
HLA-DQA1-203ENST00000395363 Q8N976 141 aa7.65□□□□□ -1.18
HLA-DQA1-203ENST00000395363 A0A087WWC5 75 aa7.64□□□□□ -1.19
HLA-DQA1-203ENST00000395363 TRBV10-1A0A0K0K1A3 114 aa7.64□□□□□ -1.19
HLA-DQA1-203ENST00000395363 CXCL1P09341 107 aa7.64□□□□□ -1.19
HLA-DQA1-203ENST00000395363 IGLC6P0CF74 106 aa7.64□□□□□ -1.19
HLA-DQA1-203ENST00000395363 GNG4P50150 75 aa7.64□□□□□ -1.19
HLA-DQA1-203ENST00000395363 RAB4BP61018 213 aa7.64□□□□□ -1.19
HLA-DQA1-203ENST00000395363 ALKAL2Q6UX46 152 aa7.64□□□□□ -1.19
HLA-DQA1-203ENST00000395363 AKAP14Q86UN6 197 aa7.64□□□□□ -1.19
HLA-DQA1-203ENST00000395363 C15orf54Q8N8G6 183 aa7.64□□□□□ -1.19
HLA-DQA1-203ENST00000395363 FER1L6-AS1Q8NA97 138 aa7.64□□□□□ -1.19
HLA-DQA1-203ENST00000395363 OR10G8Q8NGN5 311 aa7.64□□□□□ -1.19
HLA-DQA1-203ENST00000395363 MED9Q9NWA0 146 aa7.64□□□□□ -1.19
HLA-DQA1-203ENST00000395363 URGCP-MRPS24S4R325 110 aa7.64□□□□□ -1.19
HLA-DQA1-203ENST00000395363 A0A087WX48 190 aa7.63□□□□□ -1.19
HLA-DQA1-203ENST00000395363 TRBV6-8A0A0A6YYG3 113 aa7.63□□□□□ -1.19
HLA-DQA1-203ENST00000395363 A0A1B0GVG6 124 aa7.63□□□□□ -1.19
HLA-DQA1-203ENST00000395363 TMEM262E9PQX1 116 aa7.63□□□□□ -1.19
HLA-DQA1-203ENST00000395363 K7EN84 100 aa7.63□□□□□ -1.19
HLA-DQA1-203ENST00000395363 GAGE6Q13070 117 aa7.63□□□□□ -1.19
HLA-DQA1-203ENST00000395363 SUMO4Q6EEV6 95 aa7.63□□□□□ -1.19
HLA-DQA1-203ENST00000395363 SLC51BQ86UW2 128 aa7.63□□□□□ -1.19
HLA-DQA1-203ENST00000395363 AP1S3Q96PC3 154 aa7.63□□□□□ -1.19
HLA-DQA1-203ENST00000395363 RNASE7Q9H1E1 156 aaKnown RBP7.63□□□□□ -1.19
HLA-DQA1-203ENST00000395363 TRAV8-3A0A0A6YYJ7 113 aa7.62□□□□□ -1.19
HLA-DQA1-203ENST00000395363 RAB5CP51148 216 aa7.62□□□□□ -1.19
HLA-DQA1-203ENST00000395363 EIF5AL1Q6IS14 154 aaKnown RBP7.62□□□□□ -1.19
HLA-DQA1-203ENST00000395363 LYZL1Q6UWQ5 148 aa7.62□□□□□ -1.19
HLA-DQA1-203ENST00000395363 ENHOQ6UWT2 76 aa7.62□□□□□ -1.19
HLA-DQA1-203ENST00000395363 NTN5Q8WTR8 489 aaPredicted RBP7.62□□□□□ -1.19
HLA-DQA1-203ENST00000395363 CHCHD5Q9BSY4 110 aa7.62□□□□□ -1.19
HLA-DQA1-203ENST00000395363 TM2D2Q9BX73 214 aa7.62□□□□□ -1.19
HLA-DQA1-203ENST00000395363 FAM229AH3BQW9 127 aa7.61□□□□□ -1.19
HLA-DQA1-203ENST00000395363 P01737 135 aa7.61□□□□□ -1.19
HLA-DQA1-203ENST00000395363 INAFM2P0DMQ5 153 aa7.61□□□□□ -1.19
HLA-DQA1-203ENST00000395363 ATRAIDQ6UW56 229 aa7.61□□□□□ -1.19
HLA-DQA1-203ENST00000395363 NUDT10Q8NFP7 164 aa7.61□□□□□ -1.19
HLA-DQA1-203ENST00000395363 DAZAP1Q96EP5 407 aaKnown RBP7.61□□□□□ -1.19
HLA-DQA1-203ENST00000395363 NUDT11Q96G61 164 aa7.61□□□□□ -1.19
HLA-DQA1-203ENST00000395363 TRAV26-2A0A0B4J265 109 aa7.6□□□□□ -1.19
HLA-DQA1-203ENST00000395363 M0QY20 66 aa7.6□□□□□ -1.19
HLA-DQA1-203ENST00000395363 PDE6DO43924 150 aa7.6□□□□□ -1.19
HLA-DQA1-203ENST00000395363 IFNA1P01562 189 aa7.6□□□□□ -1.19
HLA-DQA1-203ENST00000395363 HLA-DQA1P01909 254 aa7.6□□□□□ -1.19
HLA-DQA1-203ENST00000395363 ANGP03950 147 aaKnown RBP7.6□□□□□ -1.19
HLA-DQA1-203ENST00000395363 SMIM17P0DL12 118 aa7.6□□□□□ -1.19
HLA-DQA1-203ENST00000395363 CEBPGP53567 150 aa7.6□□□□□ -1.19
HLA-DQA1-203ENST00000395363 FOXA3P55318 350 aaPredicted RBP7.6□□□□□ -1.19
HLA-DQA1-203ENST00000395363 FRZBQ92765 325 aa7.6□□□□□ -1.19
HLA-DQA1-203ENST00000395363 GFRA4Q9GZZ7 299 aa7.6□□□□□ -1.19
HLA-DQA1-203ENST00000395363 VAX2Q9UIW0 290 aa7.6□□□□□ -1.19
HLA-DQA1-203ENST00000395363 TEX46H3BTG2 121 aa7.59□□□□□ -1.19
HLA-DQA1-203ENST00000395363 RBX1P62877 108 aa7.59□□□□□ -1.19
HLA-DQA1-203ENST00000395363 TOR2AQ5JU69 321 aa7.59□□□□□ -1.19
HLA-DQA1-203ENST00000395363 OCC1Q8TAD7 63 aa7.59□□□□□ -1.19
HLA-DQA1-203ENST00000395363 TMEM70Q9BUB7 260 aa7.59□□□□□ -1.19
HLA-DQA1-203ENST00000395363 IGLV10-54A0A075B6I4 117 aa7.58□□□□□ -1.2
HLA-DQA1-203ENST00000395363 NTF3P20783 257 aa7.58□□□□□ -1.2
HLA-DQA1-203ENST00000395363 CRPP02741 224 aa7.57□□□□□ -1.2
HLA-DQA1-203ENST00000395363 CTRLP40313 264 aa7.57□□□□□ -1.2
HLA-DQA1-203ENST00000395363 RPS20P60866 119 aaKnown RBP7.57□□□□□ -1.2
HLA-DQA1-203ENST00000395363 KCNIP4Q6PIL6 250 aa7.57□□□□□ -1.2
HLA-DQA1-203ENST00000395363 Q6ZSA8 131 aa7.57□□□□□ -1.2
HLA-DQA1-203ENST00000395363 SCXQ7RTU7 201 aa7.57□□□□□ -1.2
HLA-DQA1-203ENST00000395363 LINC00269Q8N2A0 174 aa7.57□□□□□ -1.2
HLA-DQA1-203ENST00000395363 GTSF1Q8WW33 167 aa7.57□□□□□ -1.2
HLA-DQA1-203ENST00000395363 RMI2Q96E14 147 aa7.57□□□□□ -1.2
HLA-DQA1-203ENST00000395363 RPL39LQ96EH5 51 aaKnown RBP7.57□□□□□ -1.2
HLA-DQA1-203ENST00000395363 C1orf43Q9BWL3 253 aa7.57□□□□□ -1.2
HLA-DQA1-203ENST00000395363 RPP21Q9H633 154 aaKnown RBP7.57□□□□□ -1.2
HLA-DQA1-203ENST00000395363 LRP1Q07954 4544 aaKnown RBP7.56□□□□□ -1.2
HLA-DQA1-203ENST00000395363 IGLV4-60A0A075B6I1 120 aa7.56□□□□□ -1.2
HLA-DQA1-203ENST00000395363 USP17L23D6RBM5 183 aa7.56□□□□□ -1.2
HLA-DQA1-203ENST00000395363 CACNG7P62955 275 aa7.56□□□□□ -1.2
HLA-DQA1-203ENST00000395363 TWIST1Q15672 202 aa7.56□□□□□ -1.2
HLA-DQA1-203ENST00000395363 KRTAP26-1Q6PEX3 210 aa7.56□□□□□ -1.2
HLA-DQA1-203ENST00000395363 CHCHD7Q9BUK0 85 aa7.56□□□□□ -1.2
HLA-DQA1-203ENST00000395363 PKHD1L1Q86WI1 4243 aa7.55□□□□□ -1.2
HLA-DQA1-203ENST00000395363 TRBV25-1A0A075B6N4 114 aa7.55□□□□□ -1.2
HLA-DQA1-203ENST00000395363 GAS8-AS1O95177 125 aa7.55□□□□□ -1.2
HLA-DQA1-203ENST00000395363 ANKRD39Q53RE8 183 aa7.55□□□□□ -1.2
HLA-DQA1-203ENST00000395363 RASL11AQ6T310 242 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms