RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 TRBV7-3A0A075B6L6 115 aa5.81□□□□□ -1.48
ATG4A-205ENST00000394892 A0A087WWC5 75 aa5.81□□□□□ -1.48
ATG4A-205ENST00000394892 PFDN1O60925 122 aa5.81□□□□□ -1.48
ATG4A-205ENST00000394892 PLA2G1BP04054 148 aaKnown RBP5.81□□□□□ -1.48
ATG4A-205ENST00000394892 RAB4BP61018 213 aa5.81□□□□□ -1.48
ATG4A-205ENST00000394892 CENPWQ5EE01 88 aa5.81□□□□□ -1.48
ATG4A-205ENST00000394892 ENHOQ6UWT2 76 aa5.81□□□□□ -1.48
ATG4A-205ENST00000394892 Q6ZSA8 131 aa5.81□□□□□ -1.48
ATG4A-205ENST00000394892 KLK12Q9UKR0 248 aa5.81□□□□□ -1.48
ATG4A-205ENST00000394892 TRBV6-8A0A0A6YYG3 113 aa5.8□□□□□ -1.48
ATG4A-205ENST00000394892 TRAV8-3A0A0A6YYJ7 113 aa5.8□□□□□ -1.48
ATG4A-205ENST00000394892 EIF5AP63241 154 aaKnown RBP5.8□□□□□ -1.48
ATG4A-205ENST00000394892 KRTAP26-1Q6PEX3 210 aa5.8□□□□□ -1.48
ATG4A-205ENST00000394892 ATRAIDQ6UW56 229 aa5.8□□□□□ -1.48
ATG4A-205ENST00000394892 MANBALQ9NQG1 85 aa5.8□□□□□ -1.48
ATG4A-205ENST00000394892 FLG2Q5D862 2391 aaPredicted RBP5.79□□□□□ -1.48
ATG4A-205ENST00000394892 M0QY20 66 aa5.79□□□□□ -1.48
ATG4A-205ENST00000394892 RAB5CP51148 216 aa5.79□□□□□ -1.48
ATG4A-205ENST00000394892 RPL36AP83881 106 aaKnown RBP5.79□□□□□ -1.48
ATG4A-205ENST00000394892 MPV17L2Q567V2 206 aa5.79□□□□□ -1.48
ATG4A-205ENST00000394892 SERTAD4-AS1Q5TG53 156 aa5.79□□□□□ -1.48
ATG4A-205ENST00000394892 C9orf62Q8N4C0 152 aa5.79□□□□□ -1.48
ATG4A-205ENST00000394892 RPL36ALQ969Q0 106 aaKnown RBP5.79□□□□□ -1.48
ATG4A-205ENST00000394892 UBE2WQ96B02 151 aa5.79□□□□□ -1.48
ATG4A-205ENST00000394892 TM2D2Q9BX73 214 aa5.79□□□□□ -1.48
ATG4A-205ENST00000394892 VAX2Q9UIW0 290 aa5.79□□□□□ -1.48
ATG4A-205ENST00000394892 LRP1Q07954 4544 aaKnown RBP5.78□□□□□ -1.48
ATG4A-205ENST00000394892 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.78□□□□□ -1.48
ATG4A-205ENST00000394892 K7EN84 100 aa5.78□□□□□ -1.48
ATG4A-205ENST00000394892 BCL2P10415 239 aa5.78□□□□□ -1.48
ATG4A-205ENST00000394892 MEF2BQ02080 365 aaPredicted RBP5.78□□□□□ -1.48
ATG4A-205ENST00000394892 ZNF56Q15929 161 aa5.78□□□□□ -1.48
ATG4A-205ENST00000394892 SPANXN1Q5VSR9 72 aa5.78□□□□□ -1.48
ATG4A-205ENST00000394892 Q8N976 141 aa5.78□□□□□ -1.48
ATG4A-205ENST00000394892 OR2D3Q8NGH3 330 aa5.78□□□□□ -1.48
ATG4A-205ENST00000394892 DEFB104AQ8WTQ1 72 aa5.78□□□□□ -1.48
ATG4A-205ENST00000394892 IGKV2D-24A0A075B6R9 120 aa5.77□□□□□ -1.49
ATG4A-205ENST00000394892 LOC100996750A0A140TA64 210 aa5.77□□□□□ -1.49
ATG4A-205ENST00000394892 KRTAP29-1A8MX34 341 aaPredicted RBP5.77□□□□□ -1.49
ATG4A-205ENST00000394892 KRTAP10-4P60372 401 aaPredicted RBP5.77□□□□□ -1.49
ATG4A-205ENST00000394892 SUMO4Q6EEV6 95 aa5.77□□□□□ -1.49
ATG4A-205ENST00000394892 LYZL1Q6UWQ5 148 aa5.77□□□□□ -1.49
ATG4A-205ENST00000394892 SLC51BQ86UW2 128 aa5.77□□□□□ -1.49
ATG4A-205ENST00000394892 FER1L6-AS1Q8NA97 138 aa5.77□□□□□ -1.49
ATG4A-205ENST00000394892 NUDT10Q8NFP7 164 aa5.77□□□□□ -1.49
ATG4A-205ENST00000394892 NUDT11Q96G61 164 aa5.77□□□□□ -1.49
ATG4A-205ENST00000394892 CHCHD7Q9BUK0 85 aa5.77□□□□□ -1.49
ATG4A-205ENST00000394892 KRTAP4-6Q9BYQ5 205 aa5.77□□□□□ -1.49
ATG4A-205ENST00000394892 GFRA4Q9GZZ7 299 aa5.77□□□□□ -1.49
ATG4A-205ENST00000394892 A0A087WX48 190 aa5.76□□□□□ -1.49
ATG4A-205ENST00000394892 F5H697 171 aa5.76□□□□□ -1.49
ATG4A-205ENST00000394892 GNG4P50150 75 aa5.76□□□□□ -1.49
ATG4A-205ENST00000394892 RBX1P62877 108 aa5.76□□□□□ -1.49
ATG4A-205ENST00000394892 GAGE6Q13070 117 aa5.76□□□□□ -1.49
ATG4A-205ENST00000394892 TOR2AQ5JU69 321 aa5.76□□□□□ -1.49
ATG4A-205ENST00000394892 C15orf54Q8N8G6 183 aa5.76□□□□□ -1.49
ATG4A-205ENST00000394892 OCC1Q8TAD7 63 aa5.76□□□□□ -1.49
ATG4A-205ENST00000394892 TPPP3Q9BW30 176 aa5.76□□□□□ -1.49
ATG4A-205ENST00000394892 PRR34Q9NV39 138 aa5.76□□□□□ -1.49
ATG4A-205ENST00000394892 MED9Q9NWA0 146 aa5.76□□□□□ -1.49
ATG4A-205ENST00000394892 FAT3Q8TDW7 4589 aa5.75□□□□□ -1.49
ATG4A-205ENST00000394892 TMEM262E9PQX1 116 aa5.75□□□□□ -1.49
ATG4A-205ENST00000394892 PDE6DO43924 150 aa5.75□□□□□ -1.49
ATG4A-205ENST00000394892 CTRLP40313 264 aa5.75□□□□□ -1.49
ATG4A-205ENST00000394892 FOXA3P55318 350 aaPredicted RBP5.75□□□□□ -1.49
ATG4A-205ENST00000394892 IQCJQ1A5X6 159 aa5.75□□□□□ -1.49
ATG4A-205ENST00000394892 LYPD6BQ8NI32 183 aa5.75□□□□□ -1.49
ATG4A-205ENST00000394892 GTSF1Q8WW33 167 aa5.75□□□□□ -1.49
ATG4A-205ENST00000394892 SMIM12Q96EX1 92 aa5.75□□□□□ -1.49
ATG4A-205ENST00000394892 AP1S3Q96PC3 154 aa5.75□□□□□ -1.49
ATG4A-205ENST00000394892 RNASE7Q9H1E1 156 aaKnown RBP5.75□□□□□ -1.49
ATG4A-205ENST00000394892 IGLV4-60A0A075B6I1 120 aa5.74□□□□□ -1.49
ATG4A-205ENST00000394892 A0A1B0GVG6 124 aa5.74□□□□□ -1.49
ATG4A-205ENST00000394892 P01737 135 aa5.74□□□□□ -1.49
ATG4A-205ENST00000394892 MGPP08493 103 aa5.74□□□□□ -1.49
ATG4A-205ENST00000394892 NTF3P20783 257 aa5.74□□□□□ -1.49
ATG4A-205ENST00000394892 NKX2-5P52952 324 aaPredicted RBP5.74□□□□□ -1.49
ATG4A-205ENST00000394892 RPS20P60866 119 aaKnown RBP5.74□□□□□ -1.49
ATG4A-205ENST00000394892 EIF5AL1Q6IS14 154 aaKnown RBP5.74□□□□□ -1.49
ATG4A-205ENST00000394892 CLPSL2Q6UWE3 100 aa5.74□□□□□ -1.49
ATG4A-205ENST00000394892 ALKAL2Q6UX46 152 aa5.74□□□□□ -1.49
ATG4A-205ENST00000394892 SCXQ7RTU7 201 aa5.74□□□□□ -1.49
ATG4A-205ENST00000394892 C20orf203Q8NBC4 194 aa5.74□□□□□ -1.49
ATG4A-205ENST00000394892 CHCHD5Q9BSY4 110 aa5.74□□□□□ -1.49
ATG4A-205ENST00000394892 CNFNQ9BYD5 112 aa5.74□□□□□ -1.49
ATG4A-205ENST00000394892 COX11Q9Y6N1 276 aa5.74□□□□□ -1.49
ATG4A-205ENST00000394892 URGCP-MRPS24S4R325 110 aa5.74□□□□□ -1.49
ATG4A-205ENST00000394892 USP17L23D6RBM5 183 aa5.73□□□□□ -1.49
ATG4A-205ENST00000394892 PANO1I0J062 215 aa5.73□□□□□ -1.49
ATG4A-205ENST00000394892 GAS8-AS1O95177 125 aa5.73□□□□□ -1.49
ATG4A-205ENST00000394892 IFNA1P01562 189 aa5.73□□□□□ -1.49
ATG4A-205ENST00000394892 ANGP03950 147 aaKnown RBP5.73□□□□□ -1.49
ATG4A-205ENST00000394892 PRSS1P07477 247 aa5.73□□□□□ -1.49
ATG4A-205ENST00000394892 CACNG7P62955 275 aa5.73□□□□□ -1.49
ATG4A-205ENST00000394892 LINC00269Q8N2A0 174 aa5.73□□□□□ -1.49
ATG4A-205ENST00000394892 GATD1Q8NB37 220 aa5.73□□□□□ -1.49
ATG4A-205ENST00000394892 RMI2Q96E14 147 aa5.73□□□□□ -1.49
ATG4A-205ENST00000394892 DAZAP1Q96EP5 407 aaKnown RBP5.73□□□□□ -1.49
ATG4A-205ENST00000394892 TRAV26-2A0A0B4J265 109 aa5.72□□□□□ -1.49
ATG4A-205ENST00000394892 F2Z2F3 143 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms