RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 LINC01559Q495D7 138 aa7.51□□□□□ -1.21
PSEN1-204ENST00000394164 A4D1N5 150 aa7.51□□□□□ -1.21
PSEN1-204ENST00000394164 ZNF56Q15929 161 aa7.51□□□□□ -1.21
PSEN1-204ENST00000394164 HIST2H2BDQ6DRA6 164 aa7.51□□□□□ -1.21
PSEN1-204ENST00000394164 C20orf173Q96LM9 149 aa7.51□□□□□ -1.21
PSEN1-204ENST00000394164 ODF3Q96PU9 254 aa7.51□□□□□ -1.21
PSEN1-204ENST00000394164 TNFRSF18Q9Y5U5 241 aa7.51□□□□□ -1.21
PSEN1-204ENST00000394164 TRAV12-1A0A0B4J245 112 aa7.5□□□□□ -1.21
PSEN1-204ENST00000394164 M0QXV9 152 aa7.5□□□□□ -1.21
PSEN1-204ENST00000394164 COX6B1P14854 86 aa7.5□□□□□ -1.21
PSEN1-204ENST00000394164 CNFNQ9BYD5 112 aa7.5□□□□□ -1.21
PSEN1-204ENST00000394164 ACANP16112 2415 aa7.5□□□□□ -1.21
PSEN1-204ENST00000394164 LINC01619G3V211 115 aa7.5□□□□□ -1.21
PSEN1-204ENST00000394164 IGHV3-30P01768 117 aa7.5□□□□□ -1.21
PSEN1-204ENST00000394164 IGHV3-30-5P0DP03 117 aa7.5□□□□□ -1.21
PSEN1-204ENST00000394164 PRR9Q5T870 116 aa7.5□□□□□ -1.21
PSEN1-204ENST00000394164 YAE1D1Q9NRH1 226 aa7.5□□□□□ -1.21
PSEN1-204ENST00000394164 VPREB3Q9UKI3 123 aa7.5□□□□□ -1.21
PSEN1-204ENST00000394164 SUMO2P61956 95 aaKnown RBP7.49□□□□□ -1.21
PSEN1-204ENST00000394164 SBSPONQ8IVN8 264 aa7.49□□□□□ -1.21
PSEN1-204ENST00000394164 TOMM6Q96B49 74 aa7.49□□□□□ -1.21
PSEN1-204ENST00000394164 DUX5Q96PT3 197 aa7.49□□□□□ -1.21
PSEN1-204ENST00000394164 DUX3Q96PT4 197 aa7.49□□□□□ -1.21
PSEN1-204ENST00000394164 MTORP42345 2549 aa7.49□□□□□ -1.21
PSEN1-204ENST00000394164 TRBV7-1A0A0A6YYK4 115 aa7.49□□□□□ -1.21
PSEN1-204ENST00000394164 IGHV7-4-1A0A0J9YVY3 117 aa7.49□□□□□ -1.21
PSEN1-204ENST00000394164 IGKV3-20P01619 116 aa7.49□□□□□ -1.21
PSEN1-204ENST00000394164 RPL39P62891 51 aaKnown RBP7.49□□□□□ -1.21
PSEN1-204ENST00000394164 MRPL23Q16540 153 aaKnown RBP7.49□□□□□ -1.21
PSEN1-204ENST00000394164 C10orf105Q8TEF2 133 aa7.49□□□□□ -1.21
PSEN1-204ENST00000394164 NBPF19A0A087WUL8 3843 aa7.49□□□□□ -1.21
PSEN1-204ENST00000394164 EIF4EBP3O60516 100 aaPredicted RBP7.49□□□□□ -1.21
PSEN1-204ENST00000394164 NPC2P61916 151 aa7.48□□□□□ -1.21
PSEN1-204ENST00000394164 ORMDL2Q53FV1 153 aa7.48□□□□□ -1.21
PSEN1-204ENST00000394164 PSMG3-AS1Q96PY0 264 aa7.48□□□□□ -1.21
PSEN1-204ENST00000394164 ZNF469Q96JG9 3925 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-204ENST00000394164 LOC107984640A0A0U1RRK4 108 aa7.48□□□□□ -1.21
PSEN1-204ENST00000394164 ADARB2-AS1A8MUL3 147 aa7.48□□□□□ -1.21
PSEN1-204ENST00000394164 CRYGDP07320 174 aa7.48□□□□□ -1.21
PSEN1-204ENST00000394164 ASIPP42127 132 aa7.48□□□□□ -1.21
PSEN1-204ENST00000394164 HERVK_113P61574 105 aa7.48□□□□□ -1.21
PSEN1-204ENST00000394164 MSMBP08118 114 aa7.47□□□□□ -1.21
PSEN1-204ENST00000394164 S100A4P26447 101 aaKnown RBP7.47□□□□□ -1.21
PSEN1-204ENST00000394164 TP53TG1Q9Y2A0 90 aa7.47□□□□□ -1.21
PSEN1-204ENST00000394164 IGHV4-59P01825 116 aa7.47□□□□□ -1.21
PSEN1-204ENST00000394164 RNASE4P34096 147 aaKnown RBP7.47□□□□□ -1.21
PSEN1-204ENST00000394164 LINC01620Q4KN68 170 aa7.47□□□□□ -1.21
PSEN1-204ENST00000394164 MUSTN1Q8IVN3 82 aa7.46□□□□□ -1.21
PSEN1-204ENST00000394164 OPRPNQ99935 248 aaPredicted RBP7.46□□□□□ -1.21
PSEN1-204ENST00000394164 SLC50A1Q9BRV3 221 aa7.46□□□□□ -1.21
PSEN1-204ENST00000394164 PRRC2AP48634 2157 aaKnown RBP7.46□□□□□ -1.21
PSEN1-204ENST00000394164 IGLV4-69A0A075B6H9 119 aa7.46□□□□□ -1.22
PSEN1-204ENST00000394164 H3BMM0 161 aa7.46□□□□□ -1.22
PSEN1-204ENST00000394164 IGHV3-33P01772 117 aa7.46□□□□□ -1.22
PSEN1-204ENST00000394164 LGALS3P17931 250 aaKnown RBP7.46□□□□□ -1.22
PSEN1-204ENST00000394164 Q6ZSV7 163 aa7.46□□□□□ -1.22
PSEN1-204ENST00000394164 COX8CQ7Z4L0 72 aa7.46□□□□□ -1.22
PSEN1-204ENST00000394164 UBE2WQ96B02 151 aa7.46□□□□□ -1.22
PSEN1-204ENST00000394164 C2orf82Q6UX34 121 aa7.46□□□□□ -1.22
PSEN1-204ENST00000394164 OR10J6PQ8NGY7 276 aa7.46□□□□□ -1.22
PSEN1-204ENST00000394164 ZNF580Q9UK33 172 aa7.46□□□□□ -1.22
PSEN1-204ENST00000394164 CHD6Q8TD26 2715 aa7.45□□□□□ -1.22
PSEN1-204ENST00000394164 TSHBP01222 138 aa7.45□□□□□ -1.22
PSEN1-204ENST00000394164 LINC00694P0DN24 101 aa7.45□□□□□ -1.22
PSEN1-204ENST00000394164 SLC25A29Q8N8R3 303 aa7.45□□□□□ -1.22
PSEN1-204ENST00000394164 RHPN1-AS1Q9BWJ2 59 aa7.45□□□□□ -1.22
PSEN1-204ENST00000394164 KLK5Q9Y337 293 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-204ENST00000394164 GNRH2O43555 120 aa7.45□□□□□ -1.22
PSEN1-204ENST00000394164 GPHB5Q86YW7 130 aa7.45□□□□□ -1.22
PSEN1-204ENST00000394164 ZNRF2Q8NHG8 242 aa7.45□□□□□ -1.22
PSEN1-204ENST00000394164 NOTCH2Q04721 2471 aa7.45□□□□□ -1.22
PSEN1-204ENST00000394164 JMJD1CQ15652 2540 aa7.44□□□□□ -1.22
PSEN1-204ENST00000394164 J3QQQ9 107 aa7.44□□□□□ -1.22
PSEN1-204ENST00000394164 PRSS2P07478 247 aa7.44□□□□□ -1.22
PSEN1-204ENST00000394164 ATXN8Q156A1 80 aa7.44□□□□□ -1.22
PSEN1-204ENST00000394164 DEFB112Q30KQ8 113 aa7.44□□□□□ -1.22
PSEN1-204ENST00000394164 CLEC2BQ92478 149 aa7.44□□□□□ -1.22
PSEN1-204ENST00000394164 NIPBLQ6KC79 2804 aaeCLIP7.44□□□□□ -1.22
PSEN1-204ENST00000394164 PHLDA3Q9Y5J5 127 aa7.44□□□□□ -1.22
PSEN1-204ENST00000394164 FAM236AA0A1B0GUQ0 79 aa7.44□□□□□ -1.22
PSEN1-204ENST00000394164 FAM236BA0A1B0GV22 79 aa7.44□□□□□ -1.22
PSEN1-204ENST00000394164 FAM223BA6NKX1 122 aa7.44□□□□□ -1.22
PSEN1-204ENST00000394164 TRIAP1O43715 76 aa7.44□□□□□ -1.22
PSEN1-204ENST00000394164 ZNF22P17026 224 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-204ENST00000394164 CEMP1Q6PRD7 247 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-204ENST00000394164 FAM223AQ8IWN6 122 aa7.44□□□□□ -1.22
PSEN1-204ENST00000394164 TMEM263Q8WUH6 116 aaKnown RBP7.44□□□□□ -1.22
PSEN1-204ENST00000394164 JPT2Q9H910 190 aa7.43□□□□□ -1.22
PSEN1-204ENST00000394164 C2CD3Q4AC94 2353 aa7.43□□□□□ -1.22
PSEN1-204ENST00000394164 A6NDX4 124 aa7.43□□□□□ -1.22
PSEN1-204ENST00000394164 RNF223E7ERA6 249 aa7.43□□□□□ -1.22
PSEN1-204ENST00000394164 IGHG2P01859 326 aa7.43□□□□□ -1.22
PSEN1-204ENST00000394164 SRSF2Q01130 221 aaKnown RBP7.43□□□□□ -1.22
PSEN1-204ENST00000394164 LINC01587Q99440 93 aa7.43□□□□□ -1.22
PSEN1-204ENST00000394164 FLNAP21333 2647 aaKnown RBP7.43□□□□□ -1.22
PSEN1-204ENST00000394164 F5H697 171 aa7.42□□□□□ -1.22
PSEN1-204ENST00000394164 LGALS9O00182 355 aa7.42□□□□□ -1.22
PSEN1-204ENST00000394164 KRTAP10-9P60411 292 aa7.42□□□□□ -1.22
PSEN1-204ENST00000394164 TRGV11A0A075B6L2 103 aa7.42□□□□□ -1.22
PSEN1-204ENST00000394164 TRAV12-2A0A075B6T6 113 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms