RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 TNFRSF18Q9Y5U5 241 aa8.01□□□□□ -1.13
CALD1-203ENST00000393118 CLPSL1A2RUU4 121 aa8.01□□□□□ -1.13
CALD1-203ENST00000393118 RS1O15537 224 aa8.01□□□□□ -1.13
CALD1-203ENST00000393118 DUSP14O95147 198 aaKnown RBP8.01□□□□□ -1.13
CALD1-203ENST00000393118 COL12A1Q99715 3063 aa8.01□□□□□ -1.13
CALD1-203ENST00000393118 ODF1Q14990 250 aa8□□□□□ -1.13
CALD1-203ENST00000393118 ATXN8Q156A1 80 aa8□□□□□ -1.13
CALD1-203ENST00000393118 KLHL30-AS1Q8NEE0 82 aa8□□□□□ -1.13
CALD1-203ENST00000393118 Q96MF0 132 aa8□□□□□ -1.13
CALD1-203ENST00000393118 TP53TG1Q9Y2A0 90 aa8□□□□□ -1.13
CALD1-203ENST00000393118 TRAV8-3A0A0A6YYJ7 113 aa8□□□□□ -1.13
CALD1-203ENST00000393118 A6NDX4 124 aa8□□□□□ -1.13
CALD1-203ENST00000393118 CHCHD5Q9BSY4 110 aa8□□□□□ -1.13
CALD1-203ENST00000393118 FN1P02751 2386 aaKnown RBP8□□□□□ -1.13
CALD1-203ENST00000393118 JPT2Q9H910 190 aa8□□□□□ -1.13
CALD1-203ENST00000393118 TRAV4A0A0B4J268 109 aa7.99□□□□□ -1.13
CALD1-203ENST00000393118 GAGE2AQ6NT46 116 aa7.99□□□□□ -1.13
CALD1-203ENST00000393118 MAPKAPK5-AS1Q8N8E1 139 aa7.99□□□□□ -1.13
CALD1-203ENST00000393118 SDHAF1A6NFY7 115 aa7.99□□□□□ -1.13
CALD1-203ENST00000393118 RELNP78509 3460 aa7.99□□□□□ -1.13
CALD1-203ENST00000393118 JMJD1CQ15652 2540 aa7.99□□□□□ -1.13
CALD1-203ENST00000393118 FAM236AA0A1B0GUQ0 79 aa7.99□□□□□ -1.13
CALD1-203ENST00000393118 FAM236BA0A1B0GV22 79 aa7.99□□□□□ -1.13
CALD1-203ENST00000393118 H3BUA1 57 aa7.99□□□□□ -1.13
CALD1-203ENST00000393118 VCYO14598 125 aa7.99□□□□□ -1.13
CALD1-203ENST00000393118 HOXD3P31249 432 aaPredicted RBP7.99□□□□□ -1.13
CALD1-203ENST00000393118 PEMTQ9UBM1 199 aa7.99□□□□□ -1.13
CALD1-203ENST00000393118 PRO1854Q9UHT4 67 aa7.99□□□□□ -1.13
CALD1-203ENST00000393118 LENEPQ9Y5L5 61 aa7.99□□□□□ -1.13
CALD1-203ENST00000393118 AVPP01185 164 aa7.98□□□□□ -1.13
CALD1-203ENST00000393118 PRR9Q5T870 116 aa7.98□□□□□ -1.13
CALD1-203ENST00000393118 ATP6V0E2Q8NHE4 81 aa7.98□□□□□ -1.13
CALD1-203ENST00000393118 RNF185Q96GF1 192 aa7.98□□□□□ -1.13
CALD1-203ENST00000393118 F8VRH5 84 aa7.98□□□□□ -1.13
CALD1-203ENST00000393118 TCL1BO95988 128 aa7.98□□□□□ -1.13
CALD1-203ENST00000393118 HIST2H2BDQ6DRA6 164 aa7.98□□□□□ -1.13
CALD1-203ENST00000393118 TRPT1Q86TN4 253 aaKnown RBP7.98□□□□□ -1.13
CALD1-203ENST00000393118 UBE2E2Q96LR5 201 aa7.98□□□□□ -1.13
CALD1-203ENST00000393118 TM2D2Q9BX73 214 aa7.98□□□□□ -1.13
CALD1-203ENST00000393118 A0A0U1RRA0 63 aa7.98□□□□□ -1.13
CALD1-203ENST00000393118 FAM110AQ9BQ89 295 aa7.98□□□□□ -1.13
CALD1-203ENST00000393118 SPANXA1Q9NS26 97 aa7.97□□□□□ -1.13
CALD1-203ENST00000393118 VPREB3Q9UKI3 123 aa7.97□□□□□ -1.13
CALD1-203ENST00000393118 IGHG4P01861 327 aa7.97□□□□□ -1.13
CALD1-203ENST00000393118 SLURP1P55000 103 aa7.97□□□□□ -1.13
CALD1-203ENST00000393118 TRGV11A0A075B6L2 103 aa7.97□□□□□ -1.13
CALD1-203ENST00000393118 IGHV1OR15-1A0A075B7D0 117 aa7.97□□□□□ -1.13
CALD1-203ENST00000393118 EDN2P20800 178 aa7.97□□□□□ -1.13
CALD1-203ENST00000393118 IGHV4OR15-8A0A075B7B6 117 aa7.96□□□□□ -1.13
CALD1-203ENST00000393118 A0A087WW49 117 aa7.96□□□□□ -1.13
CALD1-203ENST00000393118 A0A087WX48 190 aa7.96□□□□□ -1.14
CALD1-203ENST00000393118 IGKV3OR2-268A0A0C4DH90 116 aa7.96□□□□□ -1.14
CALD1-203ENST00000393118 STHQ8IWL8 128 aa7.96□□□□□ -1.14
CALD1-203ENST00000393118 XCL2Q9UBD3 114 aa7.96□□□□□ -1.14
CALD1-203ENST00000393118 CD28P10747 220 aa7.95□□□□□ -1.14
CALD1-203ENST00000393118 ZFAND2AQ8N6M9 145 aa7.95□□□□□ -1.14
CALD1-203ENST00000393118 IGHV3-16A0A0C4DH30 117 aa7.95□□□□□ -1.14
CALD1-203ENST00000393118 CFAP126Q5VTH2 177 aa7.95□□□□□ -1.14
CALD1-203ENST00000393118 PHLDA1Q8WV24 401 aaPredicted RBP7.95□□□□□ -1.14
CALD1-203ENST00000393118 CDIP1Q9H305 208 aa7.95□□□□□ -1.14
CALD1-203ENST00000393118 PPDPFQ9H3Y8 114 aa7.95□□□□□ -1.14
CALD1-203ENST00000393118 IGHV3-53P01767 116 aa7.95□□□□□ -1.14
CALD1-203ENST00000393118 C5orf47Q569G3 176 aa7.95□□□□□ -1.14
CALD1-203ENST00000393118 NFE4Q86UQ8 179 aa7.95□□□□□ -1.14
CALD1-203ENST00000393118 TMEM126AQ9H061 195 aa7.95□□□□□ -1.14
CALD1-203ENST00000393118 GATD1Q8NB37 220 aa7.95□□□□□ -1.14
CALD1-203ENST00000393118 PIFOQ8TCI5 191 aa7.94□□□□□ -1.14
CALD1-203ENST00000393118 MDFICQ9P1T7 246 aa7.94□□□□□ -1.14
CALD1-203ENST00000393118 U3KQK5 164 aa7.94□□□□□ -1.14
CALD1-203ENST00000393118 RPL39P62891 51 aaKnown RBP7.94□□□□□ -1.14
CALD1-203ENST00000393118 M0R2P5 195 aa7.94□□□□□ -1.14
CALD1-203ENST00000393118 ELANEP08246 267 aa7.94□□□□□ -1.14
CALD1-203ENST00000393118 LGALS1P09382 135 aaKnown RBP7.94□□□□□ -1.14
CALD1-203ENST00000393118 PAPPA-AS1Q5QFB9 102 aa7.94□□□□□ -1.14
CALD1-203ENST00000393118 SUMO4Q6EEV6 95 aa7.94□□□□□ -1.14
CALD1-203ENST00000393118 Q8N1Y9 231 aa7.94□□□□□ -1.14
CALD1-203ENST00000393118 FASNP49327 2511 aaKnown RBP7.93□□□□□ -1.14
CALD1-203ENST00000393118 TEX49A0A1B0GTD5 131 aa7.93□□□□□ -1.14
CALD1-203ENST00000393118 J3KT08 172 aa7.93□□□□□ -1.14
CALD1-203ENST00000393118 J3QLI3 93 aa7.93□□□□□ -1.14
CALD1-203ENST00000393118 SRSF2Q01130 221 aaKnown RBP7.93□□□□□ -1.14
CALD1-203ENST00000393118 C1orf43Q9BWL3 253 aa7.93□□□□□ -1.14
CALD1-203ENST00000393118 A0A096LNJ9 63 aa7.93□□□□□ -1.14
CALD1-203ENST00000393118 RNASE13Q5GAN3 156 aaKnown RBP7.93□□□□□ -1.14
CALD1-203ENST00000393118 APRG1Q8IVJ8 170 aa7.93□□□□□ -1.14
CALD1-203ENST00000393118 LINC01619G3V211 115 aa7.92□□□□□ -1.14
CALD1-203ENST00000393118 GPHB5Q86YW7 130 aa7.92□□□□□ -1.14
CALD1-203ENST00000393118 CARD19Q96LW7 228 aa7.92□□□□□ -1.14
CALD1-203ENST00000393118 TRGV1A0A0A0MS02 117 aa7.92□□□□□ -1.14
CALD1-203ENST00000393118 IGHV3-38A0A0C4DH36 116 aa7.92□□□□□ -1.14
CALD1-203ENST00000393118 SMG1Q96Q15 3661 aaKnown RBP7.92□□□□□ -1.14
CALD1-203ENST00000393118 RHODO00212 210 aa7.92□□□□□ -1.14
CALD1-203ENST00000393118 CFC1BP0CG36 223 aa7.92□□□□□ -1.14
CALD1-203ENST00000393118 CFC1P0CG37 223 aa7.92□□□□□ -1.14
CALD1-203ENST00000393118 NSUN5P1Q3KNT7 163 aa7.92□□□□□ -1.14
CALD1-203ENST00000393118 RASL10AQ92737 203 aa7.92□□□□□ -1.14
CALD1-203ENST00000393118 SPXQ9BT56 116 aa7.92□□□□□ -1.14
CALD1-203ENST00000393118 FLNCQ14315 2725 aa7.92□□□□□ -1.14
CALD1-203ENST00000393118 ASH1LQ9NR48 2969 aaKnown RBP7.92□□□□□ -1.14
CALD1-203ENST00000393118 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms