RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 LINC00588Q9Y4M8 146 aa10.31□□□□□ -0.76
SUMO1-203ENST00000392246 A0A1B0GXF2 115 aa10.3□□□□□ -0.76
SUMO1-203ENST00000392246 LINC00694P0DN24 101 aa10.3□□□□□ -0.76
SUMO1-203ENST00000392246 NEXN-AS1Q8NBZ9 246 aa10.3□□□□□ -0.76
SUMO1-203ENST00000392246 FRZBQ92765 325 aa10.3□□□□□ -0.76
SUMO1-203ENST00000392246 BTF3L4Q96K17 158 aa10.3□□□□□ -0.76
SUMO1-203ENST00000392246 RASL11AQ6T310 242 aa10.29□□□□□ -0.76
SUMO1-203ENST00000392246 DNAJC30Q96LL9 226 aa10.29□□□□□ -0.76
SUMO1-203ENST00000392246 RAB4AP20338 218 aa10.28□□□□□ -0.76
SUMO1-203ENST00000392246 S100PP25815 95 aa10.28□□□□□ -0.76
SUMO1-203ENST00000392246 TIRAPP58753 221 aa10.28□□□□□ -0.76
SUMO1-203ENST00000392246 AMN1Q8IY45 258 aa10.28□□□□□ -0.76
SUMO1-203ENST00000392246 GATD1Q8NB37 220 aa10.28□□□□□ -0.76
SUMO1-203ENST00000392246 RNF185Q96GF1 192 aa10.28□□□□□ -0.76
SUMO1-203ENST00000392246 GTSF1LQ9H1H1 148 aa10.28□□□□□ -0.76
SUMO1-203ENST00000392246 MRPS16Q9Y3D3 137 aaKnown RBP10.28□□□□□ -0.76
SUMO1-203ENST00000392246 TNFRSF18Q9Y5U5 241 aa10.28□□□□□ -0.76
SUMO1-203ENST00000392246 DNAH1Q9P2D7 4330 aa10.28□□□□□ -0.76
SUMO1-203ENST00000392246 TRAV9-1A0A075B6T8 112 aa10.28□□□□□ -0.76
SUMO1-203ENST00000392246 TRAV26-2A0A0B4J265 109 aa10.28□□□□□ -0.76
SUMO1-203ENST00000392246 UBE2D3P61077 147 aa10.28□□□□□ -0.76
SUMO1-203ENST00000392246 UBE2D2P62837 147 aa10.28□□□□□ -0.76
SUMO1-203ENST00000392246 NIT2Q9NQR4 276 aa10.28□□□□□ -0.76
SUMO1-203ENST00000392246 VPS13DQ5THJ4 4388 aa10.27□□□□□ -0.76
SUMO1-203ENST00000392246 FAM104BQ5XKR9 115 aa10.27□□□□□ -0.77
SUMO1-203ENST00000392246 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.27□□□□□ -0.77
SUMO1-203ENST00000392246 MRAP2Q96G30 205 aa10.27□□□□□ -0.77
SUMO1-203ENST00000392246 UPK3BQ9BT76 320 aa10.27□□□□□ -0.77
SUMO1-203ENST00000392246 KMT2CQ8NEZ4 4911 aaKnown RBP10.26□□□□□ -0.77
SUMO1-203ENST00000392246 URGCP-MRPS24S4R325 110 aa10.26□□□□□ -0.77
SUMO1-203ENST00000392246 SACSQ9NZJ4 4579 aa10.26□□□□□ -0.77
SUMO1-203ENST00000392246 DAZ4Q86SG3 579 aaKnown RBP10.25□□□□□ -0.77
SUMO1-203ENST00000392246 DAZ3Q9NR90 486 aaKnown RBP10.25□□□□□ -0.77
SUMO1-203ENST00000392246 MRPL51Q4U2R6 128 aaKnown RBP10.24□□□□□ -0.77
SUMO1-203ENST00000392246 LELP1Q5T871 98 aa10.24□□□□□ -0.77
SUMO1-203ENST00000392246 Q9H8V8 135 aa10.24□□□□□ -0.77
SUMO1-203ENST00000392246 KMT2AQ03164 3969 aa10.24□□□□□ -0.77
SUMO1-203ENST00000392246 OR10J3Q5JRS4 329 aa10.23□□□□□ -0.77
SUMO1-203ENST00000392246 RPL39LQ96EH5 51 aaKnown RBP10.23□□□□□ -0.77
SUMO1-203ENST00000392246 TRAV8-6A0A0B4J262 113 aa10.23□□□□□ -0.77
SUMO1-203ENST00000392246 IGHV3-38A0A0C4DH36 116 aa10.23□□□□□ -0.77
SUMO1-203ENST00000392246 PPP1R17O96001 155 aa10.23□□□□□ -0.77
SUMO1-203ENST00000392246 TRBV6-5A0A0K0K1A5 114 aa10.22□□□□□ -0.77
SUMO1-203ENST00000392246 SIVA1O15304 175 aa10.22□□□□□ -0.77
SUMO1-203ENST00000392246 GAS8-AS1O95177 125 aa10.22□□□□□ -0.77
SUMO1-203ENST00000392246 CKS2P33552 79 aa10.22□□□□□ -0.77
SUMO1-203ENST00000392246 TMEM97Q5BJF2 176 aa10.22□□□□□ -0.77
SUMO1-203ENST00000392246 ATRAIDQ6UW56 229 aa10.22□□□□□ -0.77
SUMO1-203ENST00000392246 IGLV2-18A0A075B6J9 118 aa10.21□□□□□ -0.78
SUMO1-203ENST00000392246 SMKR1H3BMG3 65 aa10.21□□□□□ -0.78
SUMO1-203ENST00000392246 NCR2O95944 276 aa10.21□□□□□ -0.78
SUMO1-203ENST00000392246 ST20Q9HBF5 79 aa10.21□□□□□ -0.78
SUMO1-203ENST00000392246 PPBPP02775 128 aa10.2□□□□□ -0.78
SUMO1-203ENST00000392246 RPS10P46783 165 aaKnown RBP10.2□□□□□ -0.78
SUMO1-203ENST00000392246 COX19Q49B96 90 aa10.2□□□□□ -0.78
SUMO1-203ENST00000392246 WFDC10BQ8IUB3 73 aa10.2□□□□□ -0.78
SUMO1-203ENST00000392246 DNAH6Q9C0G6 4158 aa10.2□□□□□ -0.78
SUMO1-203ENST00000392246 HYDINQ4G0P3 5121 aa10.19□□□□□ -0.78
SUMO1-203ENST00000392246 TRBV6-8A0A0A6YYG3 113 aa10.19□□□□□ -0.78
SUMO1-203ENST00000392246 SDHAF1A6NFY7 115 aa10.19□□□□□ -0.78
SUMO1-203ENST00000392246 D6R8Y8 96 aa10.19□□□□□ -0.78
SUMO1-203ENST00000392246 ELOBQ15370 118 aa10.19□□□□□ -0.78
SUMO1-203ENST00000392246 TMEM136Q6ZRR5 245 aa10.19□□□□□ -0.78
SUMO1-203ENST00000392246 NRACQ8N912 160 aa10.19□□□□□ -0.78
SUMO1-203ENST00000392246 KRTAP3-3Q9BYR6 98 aa10.19□□□□□ -0.78
SUMO1-203ENST00000392246 KRTAP3-2Q9BYR7 98 aa10.19□□□□□ -0.78
SUMO1-203ENST00000392246 ORMDL3Q8N138 153 aa10.18□□□□□ -0.78
SUMO1-203ENST00000392246 GNB1LQ9BYB4 327 aa10.18□□□□□ -0.78
SUMO1-203ENST00000392246 TRBV24-1A0A075B6N3 115 aa10.17□□□□□ -0.78
SUMO1-203ENST00000392246 TGIF2-C20orf24A0A0A6YYL0 155 aa10.17□□□□□ -0.78
SUMO1-203ENST00000392246 NBDYA0A0U1RRE5 68 aa10.17□□□□□ -0.78
SUMO1-203ENST00000392246 HLA-DQA1P01909 254 aa10.17□□□□□ -0.78
SUMO1-203ENST00000392246 DNAH10OSP0CZ25 163 aa10.17□□□□□ -0.78
SUMO1-203ENST00000392246 COTL1Q14019 142 aa10.17□□□□□ -0.78
SUMO1-203ENST00000392246 NTM-AS1Q6ZSK4 140 aa10.17□□□□□ -0.78
SUMO1-203ENST00000392246 TMEM70Q9BUB7 260 aa10.17□□□□□ -0.78
SUMO1-203ENST00000392246 SMCO4Q9NRQ5 59 aa10.17□□□□□ -0.78
SUMO1-203ENST00000392246 TRBV25-1A0A075B6N4 114 aa10.17□□□□□ -0.78
SUMO1-203ENST00000392246 I3L3M4 83 aa10.17□□□□□ -0.78
SUMO1-203ENST00000392246 M0R2N4 97 aa10.17□□□□□ -0.78
SUMO1-203ENST00000392246 PHOX2AO14813 284 aa10.17□□□□□ -0.78
SUMO1-203ENST00000392246 TNFRSF6BO95407 300 aa10.17□□□□□ -0.78
SUMO1-203ENST00000392246 PMCHP20382 165 aa10.17□□□□□ -0.78
SUMO1-203ENST00000392246 POLR2KP53803 58 aaKnown RBP10.17□□□□□ -0.78
SUMO1-203ENST00000392246 SUMO2P61956 95 aaKnown RBP10.17□□□□□ -0.78
SUMO1-203ENST00000392246 C20orf78Q9BR46 151 aa10.17□□□□□ -0.78
SUMO1-203ENST00000392246 TRAV9-2A0A087WT02 112 aa10.16□□□□□ -0.78
SUMO1-203ENST00000392246 IGHV1-24A0A0C4DH33 117 aa10.16□□□□□ -0.78
SUMO1-203ENST00000392246 TRBV27A0A0K0K1C4 114 aa10.16□□□□□ -0.78
SUMO1-203ENST00000392246 APCSP02743 223 aa10.16□□□□□ -0.78
SUMO1-203ENST00000392246 IQCJQ1A5X6 159 aa10.16□□□□□ -0.78
SUMO1-203ENST00000392246 TTC32Q5I0X7 151 aa10.16□□□□□ -0.78
SUMO1-203ENST00000392246 LINC01556Q5JQF7 62 aa10.16□□□□□ -0.78
SUMO1-203ENST00000392246 PRELID3AQ96N28 172 aa10.16□□□□□ -0.78
SUMO1-203ENST00000392246 K7EP13 123 aa10.15□□□□□ -0.78
SUMO1-203ENST00000392246 VCYO14598 125 aa10.15□□□□□ -0.78
SUMO1-203ENST00000392246 MT-ND6P03923 174 aa10.15□□□□□ -0.78
SUMO1-203ENST00000392246 Q6ZR54 194 aa10.15□□□□□ -0.78
SUMO1-203ENST00000392246 LAMTOR2Q9Y2Q5 125 aa10.15□□□□□ -0.78
SUMO1-203ENST00000392246 RYR2Q92736 4967 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms