RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 TRAV9-2A0A087WT02 112 aa7.76□□□□□ -1.17
APOBEC3F-202ENST00000381565 SRP19P09132 144 aaKnown RBP7.76□□□□□ -1.17
APOBEC3F-202ENST00000381565 CEBPGP53567 150 aa7.76□□□□□ -1.17
APOBEC3F-202ENST00000381565 LYZL1Q6UWQ5 148 aa7.76□□□□□ -1.17
APOBEC3F-202ENST00000381565 CNFNQ9BYD5 112 aa7.76□□□□□ -1.17
APOBEC3F-202ENST00000381565 EIF5A2Q9GZV4 153 aaKnown RBP7.76□□□□□ -1.17
APOBEC3F-202ENST00000381565 TRBV7-3A0A075B6L6 115 aa7.75□□□□□ -1.17
APOBEC3F-202ENST00000381565 XKRY2A2RUG3 117 aa7.75□□□□□ -1.17
APOBEC3F-202ENST00000381565 C16orf90A8MZG2 172 aa7.75□□□□□ -1.17
APOBEC3F-202ENST00000381565 IGHV3-30P01768 117 aa7.75□□□□□ -1.17
APOBEC3F-202ENST00000381565 IGHV3-33P01772 117 aa7.75□□□□□ -1.17
APOBEC3F-202ENST00000381565 IGHV3-30-3P0DP02 117 aa7.75□□□□□ -1.17
APOBEC3F-202ENST00000381565 IGHV3-30-5P0DP03 117 aa7.75□□□□□ -1.17
APOBEC3F-202ENST00000381565 KRTAP10-2P60368 255 aa7.75□□□□□ -1.17
APOBEC3F-202ENST00000381565 CACNG7P62955 275 aa7.75□□□□□ -1.17
APOBEC3F-202ENST00000381565 FAM231DQ6ZW35 169 aa7.75□□□□□ -1.17
APOBEC3F-202ENST00000381565 SPATA12Q7Z6I5 190 aa7.75□□□□□ -1.17
APOBEC3F-202ENST00000381565 C10orf126Q8N4M7 172 aa7.75□□□□□ -1.17
APOBEC3F-202ENST00000381565 GTSF1Q8WW33 167 aa7.75□□□□□ -1.17
APOBEC3F-202ENST00000381565 SMIM7Q9BQ49 75 aa7.75□□□□□ -1.17
APOBEC3F-202ENST00000381565 IBA57-AS1B1ANH7 110 aa7.74□□□□□ -1.17
APOBEC3F-202ENST00000381565 C9JQL5 133 aa7.74□□□□□ -1.17
APOBEC3F-202ENST00000381565 F2Z2F3 143 aa7.74□□□□□ -1.17
APOBEC3F-202ENST00000381565 RPL36AP83881 106 aaKnown RBP7.74□□□□□ -1.17
APOBEC3F-202ENST00000381565 SRSF3P84103 164 aaKnown RBP7.74□□□□□ -1.17
APOBEC3F-202ENST00000381565 LINC01551Q86U37 167 aa7.74□□□□□ -1.17
APOBEC3F-202ENST00000381565 NFE4Q86UQ8 179 aa7.74□□□□□ -1.17
APOBEC3F-202ENST00000381565 Q8N1X5 172 aa7.74□□□□□ -1.17
APOBEC3F-202ENST00000381565 RPL36ALQ969Q0 106 aaKnown RBP7.74□□□□□ -1.17
APOBEC3F-202ENST00000381565 A0A087WWC5 75 aa7.73□□□□□ -1.17
APOBEC3F-202ENST00000381565 MGPP08493 103 aa7.73□□□□□ -1.17
APOBEC3F-202ENST00000381565 NTF3P20783 257 aa7.73□□□□□ -1.17
APOBEC3F-202ENST00000381565 SUMO4Q6EEV6 95 aa7.73□□□□□ -1.17
APOBEC3F-202ENST00000381565 MYCBP2O75592 4640 aa7.72□□□□□ -1.17
APOBEC3F-202ENST00000381565 ZNF727A8MUV8 499 aa7.72□□□□□ -1.17
APOBEC3F-202ENST00000381565 F5H697 171 aa7.72□□□□□ -1.17
APOBEC3F-202ENST00000381565 M0QY20 66 aa7.72□□□□□ -1.17
APOBEC3F-202ENST00000381565 SMIM17P0DL12 118 aa7.72□□□□□ -1.17
APOBEC3F-202ENST00000381565 LAGE3Q14657 143 aa7.72□□□□□ -1.17
APOBEC3F-202ENST00000381565 CT83Q5H943 113 aa7.72□□□□□ -1.17
APOBEC3F-202ENST00000381565 WDR73Q6P4I2 378 aa7.72□□□□□ -1.17
APOBEC3F-202ENST00000381565 DAZ4Q86SG3 579 aaKnown RBP7.72□□□□□ -1.17
APOBEC3F-202ENST00000381565 NIT1Q86X76 327 aa7.72□□□□□ -1.17
APOBEC3F-202ENST00000381565 DAZ3Q9NR90 486 aaKnown RBP7.72□□□□□ -1.17
APOBEC3F-202ENST00000381565 A0A087WTM6 91 aa7.71□□□□□ -1.18
APOBEC3F-202ENST00000381565 LOC100996750A0A140TA64 210 aa7.71□□□□□ -1.18
APOBEC3F-202ENST00000381565 GATCO43716 136 aaKnown RBP7.71□□□□□ -1.18
APOBEC3F-202ENST00000381565 TRGC1P0CF51 173 aa7.71□□□□□ -1.18
APOBEC3F-202ENST00000381565 FUSP35637 526 aaKnown RBP eCLIP7.71□□□□□ -1.18
APOBEC3F-202ENST00000381565 ERVFC1-1P60608 527 aa7.71□□□□□ -1.18
APOBEC3F-202ENST00000381565 KRTAP4-6Q9BYQ5 205 aa7.71□□□□□ -1.18
APOBEC3F-202ENST00000381565 DPH3P1Q9H4G8 78 aa7.71□□□□□ -1.18
APOBEC3F-202ENST00000381565 Q9HAA7 133 aa7.71□□□□□ -1.18
APOBEC3F-202ENST00000381565 TRBV6-8A0A0A6YYG3 113 aa7.7□□□□□ -1.18
APOBEC3F-202ENST00000381565 LRCOL1A6NCL2 159 aa7.7□□□□□ -1.18
APOBEC3F-202ENST00000381565 NTM-AS1Q6ZSK4 140 aa7.7□□□□□ -1.18
APOBEC3F-202ENST00000381565 DNAJC30Q96LL9 226 aa7.7□□□□□ -1.18
APOBEC3F-202ENST00000381565 A8MWL6 223 aa7.69□□□□□ -1.18
APOBEC3F-202ENST00000381565 FOXA3P55318 350 aaPredicted RBP7.69□□□□□ -1.18
APOBEC3F-202ENST00000381565 RPL23P62829 140 aaKnown RBP7.69□□□□□ -1.18
APOBEC3F-202ENST00000381565 TWIST1Q15672 202 aa7.69□□□□□ -1.18
APOBEC3F-202ENST00000381565 ISOC2Q96AB3 205 aa7.69□□□□□ -1.18
APOBEC3F-202ENST00000381565 OSTCQ9NRP0 149 aa7.69□□□□□ -1.18
APOBEC3F-202ENST00000381565 V9GYV3 84 aa7.69□□□□□ -1.18
APOBEC3F-202ENST00000381565 VPS13BQ7Z7G8 4022 aa7.69□□□□□ -1.18
APOBEC3F-202ENST00000381565 H7C1H1 209 aa7.68□□□□□ -1.18
APOBEC3F-202ENST00000381565 MPV17L2Q567V2 206 aa7.68□□□□□ -1.18
APOBEC3F-202ENST00000381565 RASL11AQ6T310 242 aa7.68□□□□□ -1.18
APOBEC3F-202ENST00000381565 TSKUQ8WUA8 353 aa7.68□□□□□ -1.18
APOBEC3F-202ENST00000381565 PGLYRP4Q96LB8 373 aa7.68□□□□□ -1.18
APOBEC3F-202ENST00000381565 CHCHD7Q9BUK0 85 aa7.68□□□□□ -1.18
APOBEC3F-202ENST00000381565 DNAH8Q96JB1 4490 aa7.67□□□□□ -1.18
APOBEC3F-202ENST00000381565 DMBT1Q9UGM3 2413 aaPredicted RBP7.67□□□□□ -1.18
APOBEC3F-202ENST00000381565 TRAV26-2A0A0B4J265 109 aa7.67□□□□□ -1.18
APOBEC3F-202ENST00000381565 HIGD1CA8MV81 97 aa7.67□□□□□ -1.18
APOBEC3F-202ENST00000381565 WFDC2Q14508 124 aa7.67□□□□□ -1.18
APOBEC3F-202ENST00000381565 FAM74A3Q4VXF1 159 aa7.67□□□□□ -1.18
APOBEC3F-202ENST00000381565 GATD1Q8NB37 220 aa7.67□□□□□ -1.18
APOBEC3F-202ENST00000381565 GFRA4Q9GZZ7 299 aa7.67□□□□□ -1.18
APOBEC3F-202ENST00000381565 NAT8Q9UHE5 227 aa7.67□□□□□ -1.18
APOBEC3F-202ENST00000381565 PSCAO43653 123 aa7.66□□□□□ -1.18
APOBEC3F-202ENST00000381565 PEA15Q15121 130 aa7.66□□□□□ -1.18
APOBEC3F-202ENST00000381565 ADIRFQ15847 76 aa7.66□□□□□ -1.18
APOBEC3F-202ENST00000381565 TMEM241Q24JQ0 296 aa7.66□□□□□ -1.18
APOBEC3F-202ENST00000381565 SMDT1Q9H4I9 107 aa7.66□□□□□ -1.18
APOBEC3F-202ENST00000381565 NIT2Q9NQR4 276 aa7.66□□□□□ -1.18
APOBEC3F-202ENST00000381565 KLK12Q9UKR0 248 aa7.66□□□□□ -1.18
APOBEC3F-202ENST00000381565 URGCP-MRPS24S4R325 110 aa7.66□□□□□ -1.18
APOBEC3F-202ENST00000381565 A0A087WX48 190 aa7.65□□□□□ -1.18
APOBEC3F-202ENST00000381565 TRAV8-3A0A0A6YYJ7 113 aa7.65□□□□□ -1.18
APOBEC3F-202ENST00000381565 FAM231BA6NCW3 169 aa7.65□□□□□ -1.18
APOBEC3F-202ENST00000381565 IQCJQ1A5X6 159 aa7.65□□□□□ -1.18
APOBEC3F-202ENST00000381565 TMEM97Q5BJF2 176 aa7.65□□□□□ -1.18
APOBEC3F-202ENST00000381565 ATRAIDQ6UW56 229 aa7.65□□□□□ -1.18
APOBEC3F-202ENST00000381565 Q8N976 141 aa7.65□□□□□ -1.18
APOBEC3F-202ENST00000381565 RPL39LQ96EH5 51 aaKnown RBP7.65□□□□□ -1.18
APOBEC3F-202ENST00000381565 CHCHD5Q9BSY4 110 aa7.65□□□□□ -1.18
APOBEC3F-202ENST00000381565 TRBV25-1A0A075B6N4 114 aa7.64□□□□□ -1.19
APOBEC3F-202ENST00000381565 A0A1B0GUT8 65 aa7.64□□□□□ -1.19
APOBEC3F-202ENST00000381565 GAS8-AS1O95177 125 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms