RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 A0A0J9YXV3 536 aa10.02□□□□□ -0.81
NPHP4-203ENST00000378169 TP53TG3Q9ULZ0 132 aa10.02□□□□□ -0.81
NPHP4-203ENST00000378169 TRAV8-3A0A0A6YYJ7 113 aa10.02□□□□□ -0.81
NPHP4-203ENST00000378169 A0A0J9YY99 117 aa10.02□□□□□ -0.81
NPHP4-203ENST00000378169 S100A7L2Q5SY68 101 aa10.02□□□□□ -0.81
NPHP4-203ENST00000378169 SS18Q15532 418 aa10.01□□□□□ -0.81
NPHP4-203ENST00000378169 ESM1Q9NQ30 184 aa10.01□□□□□ -0.81
NPHP4-203ENST00000378169 TP73-AS1Q9UF72 201 aa10.01□□□□□ -0.81
NPHP4-203ENST00000378169 Q8N6K4 173 aa10.01□□□□□ -0.81
NPHP4-203ENST00000378169 C20orf173Q96LM9 149 aa10.01□□□□□ -0.81
NPHP4-203ENST00000378169 IGHV4-31P0DP07 118 aa10□□□□□ -0.81
NPHP4-203ENST00000378169 CST9LQ9H4G1 147 aa10□□□□□ -0.81
NPHP4-203ENST00000378169 USP34Q70CQ2 3546 aa10□□□□□ -0.81
NPHP4-203ENST00000378169 H3BMG7 143 aa10□□□□□ -0.81
NPHP4-203ENST00000378169 NXPH4O95158 308 aa10□□□□□ -0.81
NPHP4-203ENST00000378169 ATXN8Q156A1 80 aa10□□□□□ -0.81
NPHP4-203ENST00000378169 CEND1Q8N111 149 aa10□□□□□ -0.81
NPHP4-203ENST00000378169 ZNF843Q8N446 348 aa10□□□□□ -0.81
NPHP4-203ENST00000378169 NBEAQ8NFP9 2946 aa10□□□□□ -0.81
NPHP4-203ENST00000378169 DNAJC9-AS1A6NH13 148 aa9.99□□□□□ -0.81
NPHP4-203ENST00000378169 IGLV2-11P01706 119 aa9.99□□□□□ -0.81
NPHP4-203ENST00000378169 SRSF2Q01130 221 aaKnown RBP9.99□□□□□ -0.81
NPHP4-203ENST00000378169 C2orf82Q6UX34 121 aa9.99□□□□□ -0.81
NPHP4-203ENST00000378169 HECTD1Q9ULT8 2610 aa9.99□□□□□ -0.81
NPHP4-203ENST00000378169 AVPP01185 164 aa9.99□□□□□ -0.81
NPHP4-203ENST00000378169 IGLC6P0CF74 106 aa9.99□□□□□ -0.81
NPHP4-203ENST00000378169 MUC3AQ02505 3323 aa9.99□□□□□ -0.81
NPHP4-203ENST00000378169 RHOHQ15669 191 aa9.99□□□□□ -0.81
NPHP4-203ENST00000378169 GTSF1LQ9H1H1 148 aa9.99□□□□□ -0.81
NPHP4-203ENST00000378169 LEPROTO15243 131 aa9.99□□□□□ -0.81
NPHP4-203ENST00000378169 FRYQ5TBA9 3013 aa9.98□□□□□ -0.81
NPHP4-203ENST00000378169 ADAMTS20P59510 1910 aa9.98□□□□□ -0.81
NPHP4-203ENST00000378169 BOD1L1Q8NFC6 3051 aa9.98□□□□□ -0.81
NPHP4-203ENST00000378169 DEFB125Q8N687 156 aa9.98□□□□□ -0.81
NPHP4-203ENST00000378169 OPRPNQ99935 248 aaPredicted RBP9.98□□□□□ -0.81
NPHP4-203ENST00000378169 SCRT2Q9NQ03 307 aa9.98□□□□□ -0.81
NPHP4-203ENST00000378169 CCL25O15444 150 aa9.97□□□□□ -0.81
NPHP4-203ENST00000378169 SIGMAR1Q99720 223 aa9.97□□□□□ -0.81
NPHP4-203ENST00000378169 A0A1W2PPM0 123 aa9.97□□□□□ -0.81
NPHP4-203ENST00000378169 ANGP03950 147 aaKnown RBP9.97□□□□□ -0.81
NPHP4-203ENST00000378169 FGF6P10767 208 aa9.97□□□□□ -0.81
NPHP4-203ENST00000378169 C12orf74Q32Q52 190 aa9.97□□□□□ -0.81
NPHP4-203ENST00000378169 OCIAD2Q56VL3 154 aa9.97□□□□□ -0.81
NPHP4-203ENST00000378169 ZNF292O60281 2723 aa9.97□□□□□ -0.81
NPHP4-203ENST00000378169 ODF1Q14990 250 aa9.97□□□□□ -0.81
NPHP4-203ENST00000378169 TMEM89A2RUT3 159 aa9.96□□□□□ -0.81
NPHP4-203ENST00000378169 K7EP13 123 aa9.96□□□□□ -0.81
NPHP4-203ENST00000378169 DEFB4AO15263 64 aa9.96□□□□□ -0.81
NPHP4-203ENST00000378169 SLC25A20O43772 301 aa9.96□□□□□ -0.81
NPHP4-203ENST00000378169 Q6YL49 198 aa9.96□□□□□ -0.81
NPHP4-203ENST00000378169 C10orf126Q8N4M7 172 aa9.96□□□□□ -0.81
NPHP4-203ENST00000378169 PRO1854Q9UHT4 67 aa9.96□□□□□ -0.81
NPHP4-203ENST00000378169 APOC4P55056 127 aa9.96□□□□□ -0.82
NPHP4-203ENST00000378169 SIVA1O15304 175 aa9.96□□□□□ -0.82
NPHP4-203ENST00000378169 FXYD2P54710 66 aa9.96□□□□□ -0.82
NPHP4-203ENST00000378169 ZFAND2AQ8N6M9 145 aa9.96□□□□□ -0.82
NPHP4-203ENST00000378169 K7EQG2 157 aa9.95□□□□□ -0.82
NPHP4-203ENST00000378169 P0DMU3 169 aa9.95□□□□□ -0.82
NPHP4-203ENST00000378169 FAM231AP0DMU4 169 aa9.95□□□□□ -0.82
NPHP4-203ENST00000378169 FAM231CP0DMU5 169 aa9.95□□□□□ -0.82
NPHP4-203ENST00000378169 XCL1P47992 114 aa9.95□□□□□ -0.82
NPHP4-203ENST00000378169 C5orf38Q86SI9 138 aa9.95□□□□□ -0.82
NPHP4-203ENST00000378169 PIFOQ8TCI5 191 aa9.95□□□□□ -0.82
NPHP4-203ENST00000378169 Q6ZQT7 251 aa9.95□□□□□ -0.82
NPHP4-203ENST00000378169 BAALCQ8WXS3 180 aa9.95□□□□□ -0.82
NPHP4-203ENST00000378169 CEMP1Q6PRD7 247 aaPredicted RBP9.94□□□□□ -0.82
NPHP4-203ENST00000378169 C4orf3Q8WVX3 66 aa9.94□□□□□ -0.82
NPHP4-203ENST00000378169 C11orf86A6NJI1 115 aa9.94□□□□□ -0.82
NPHP4-203ENST00000378169 K7EP34 96 aa9.94□□□□□ -0.82
NPHP4-203ENST00000378169 Q9H8V8 135 aa9.94□□□□□ -0.82
NPHP4-203ENST00000378169 MAP6D1Q9H9H5 199 aa9.94□□□□□ -0.82
NPHP4-203ENST00000378169 TRAV8-4A0A0B4J246 113 aa9.94□□□□□ -0.82
NPHP4-203ENST00000378169 KRTAP10-9P60411 292 aa9.94□□□□□ -0.82
NPHP4-203ENST00000378169 HERVK_113P63121 156 aa9.94□□□□□ -0.82
NPHP4-203ENST00000378169 C11orf21Q9P2W6 132 aa9.93□□□□□ -0.82
NPHP4-203ENST00000378169 TET2Q6N021 2002 aaPredicted RBP9.93□□□□□ -0.82
NPHP4-203ENST00000378169 RAI1Q7Z5J4 1906 aaPredicted RBP9.93□□□□□ -0.82
NPHP4-203ENST00000378169 TAL2Q16559 108 aa9.92□□□□□ -0.82
NPHP4-203ENST00000378169 GYPEP15421 78 aa9.92□□□□□ -0.82
NPHP4-203ENST00000378169 DEFB135Q30KP9 77 aa9.92□□□□□ -0.82
NPHP4-203ENST00000378169 Q6ZSV7 163 aa9.92□□□□□ -0.82
NPHP4-203ENST00000378169 IGLV10-54A0A075B6I4 117 aa9.92□□□□□ -0.82
NPHP4-203ENST00000378169 MED14OSP0DP75 135 aa9.91□□□□□ -0.82
NPHP4-203ENST00000378169 PRR9Q5T870 116 aa9.91□□□□□ -0.82
NPHP4-203ENST00000378169 BOD1L2Q8IYS8 172 aa9.91□□□□□ -0.82
NPHP4-203ENST00000378169 RNF152Q8N8N0 203 aa9.91□□□□□ -0.82
NPHP4-203ENST00000378169 MRAPQ8TCY5 172 aa9.91□□□□□ -0.82
NPHP4-203ENST00000378169 TOMM6Q96B49 74 aa9.91□□□□□ -0.82
NPHP4-203ENST00000378169 CLPSL1A2RUU4 121 aa9.91□□□□□ -0.82
NPHP4-203ENST00000378169 H3BMM0 161 aa9.91□□□□□ -0.82
NPHP4-203ENST00000378169 GAS8-AS1O95177 125 aa9.91□□□□□ -0.82
NPHP4-203ENST00000378169 PSMB8P28062 276 aa9.91□□□□□ -0.82
NPHP4-203ENST00000378169 SPANXA1Q9NS26 97 aa9.91□□□□□ -0.82
NPHP4-203ENST00000378169 C18orf65Q6ZTR6 163 aa9.91□□□□□ -0.82
NPHP4-203ENST00000378169 UBE2DNLQ8IWF7 75 aa9.91□□□□□ -0.82
NPHP4-203ENST00000378169 DAND5Q8N907 189 aa9.91□□□□□ -0.82
NPHP4-203ENST00000378169 TRBV7-3A0A075B6L6 115 aa9.9□□□□□ -0.82
NPHP4-203ENST00000378169 TRBV20-1A0A075B6N2 111 aa9.9□□□□□ -0.82
NPHP4-203ENST00000378169 K7EQD1 137 aa9.9□□□□□ -0.82
NPHP4-203ENST00000378169 CRLF1O75462 422 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms