RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 F6UB75 175 aa8.37□□□□□ -1.07
HIF3A-205ENST00000377670 Q6ZPA2 131 aa8.37□□□□□ -1.07
HIF3A-205ENST00000377670 Q6ZSR3 168 aa8.37□□□□□ -1.07
HIF3A-205ENST00000377670 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.37□□□□□ -1.07
HIF3A-205ENST00000377670 TAX1BP3O14907 124 aa8.36□□□□□ -1.07
HIF3A-205ENST00000377670 WFDC2Q14508 124 aa8.36□□□□□ -1.07
HIF3A-205ENST00000377670 JMJD1CQ15652 2540 aa8.36□□□□□ -1.07
HIF3A-205ENST00000377670 CFAP54Q96N23 3096 aa8.36□□□□□ -1.07
HIF3A-205ENST00000377670 SORL1Q92673 2214 aa8.36□□□□□ -1.07
HIF3A-205ENST00000377670 GATA1P15976 413 aaPredicted RBP8.36□□□□□ -1.07
HIF3A-205ENST00000377670 NPBQ8NG41 125 aa8.36□□□□□ -1.07
HIF3A-205ENST00000377670 C10orf142B7Z368 130 aa8.36□□□□□ -1.07
HIF3A-205ENST00000377670 UBE2AP49459 152 aa8.36□□□□□ -1.07
HIF3A-205ENST00000377670 C20orf78Q9BR46 151 aa8.36□□□□□ -1.07
HIF3A-205ENST00000377670 BAALC-AS2P0C853 105 aa8.36□□□□□ -1.07
HIF3A-205ENST00000377670 EGR2P11161 476 aaPredicted RBP8.36□□□□□ -1.07
HIF3A-205ENST00000377670 A6NDX4 124 aa8.35□□□□□ -1.07
HIF3A-205ENST00000377670 CRIP3Q6Q6R5 217 aa8.35□□□□□ -1.07
HIF3A-205ENST00000377670 SIRPDQ9H106 197 aa8.35□□□□□ -1.07
HIF3A-205ENST00000377670 KIAA1549Q9HCM3 1950 aa8.35□□□□□ -1.07
HIF3A-205ENST00000377670 E7EUB6 86 aa8.35□□□□□ -1.07
HIF3A-205ENST00000377670 IGLV2-14P01704 120 aa8.35□□□□□ -1.07
HIF3A-205ENST00000377670 TMEM258P61165 79 aa8.35□□□□□ -1.07
HIF3A-205ENST00000377670 FXYD2P54710 66 aa8.34□□□□□ -1.07
HIF3A-205ENST00000377670 LINC01545Q5VT33 79 aa8.34□□□□□ -1.07
HIF3A-205ENST00000377670 C2CD3Q4AC94 2353 aa8.34□□□□□ -1.07
HIF3A-205ENST00000377670 BPTFQ12830 3046 aa8.34□□□□□ -1.07
HIF3A-205ENST00000377670 WDFY4Q6ZS81 3184 aa8.34□□□□□ -1.07
HIF3A-205ENST00000377670 IGHG2P01859 326 aa8.34□□□□□ -1.07
HIF3A-205ENST00000377670 TIMM17AQ99595 171 aa8.34□□□□□ -1.07
HIF3A-205ENST00000377670 CHD3Q12873 2000 aaKnown RBP8.34□□□□□ -1.07
HIF3A-205ENST00000377670 Q8N9W7 124 aa8.34□□□□□ -1.07
HIF3A-205ENST00000377670 LRP4O75096 1905 aa8.33□□□□□ -1.08
HIF3A-205ENST00000377670 FAM110AQ9BQ89 295 aa8.33□□□□□ -1.08
HIF3A-205ENST00000377670 HHLA3Q9XRX5 114 aa8.33□□□□□ -1.08
HIF3A-205ENST00000377670 ETDCA0A1B0GVM5 59 aa8.33□□□□□ -1.08
HIF3A-205ENST00000377670 HERVK_113P63121 156 aa8.33□□□□□ -1.08
HIF3A-205ENST00000377670 GPHB5Q86YW7 130 aa8.33□□□□□ -1.08
HIF3A-205ENST00000377670 DYNAPQ8N1N2 210 aa8.33□□□□□ -1.08
HIF3A-205ENST00000377670 DSCAMO60469 2012 aa8.33□□□□□ -1.08
HIF3A-205ENST00000377670 DEFB131BA0A096LNP1 70 aa8.33□□□□□ -1.08
HIF3A-205ENST00000377670 G3V4G9 280 aa8.33□□□□□ -1.08
HIF3A-205ENST00000377670 SPANXCQ9NY87 97 aa8.33□□□□□ -1.08
HIF3A-205ENST00000377670 DNAH14Q0VDD8 3507 aa8.33□□□□□ -1.08
HIF3A-205ENST00000377670 VCANP13611 3396 aa8.33□□□□□ -1.08
HIF3A-205ENST00000377670 LMO4P61968 165 aa8.33□□□□□ -1.08
HIF3A-205ENST00000377670 IGLV10-54A0A075B6I4 117 aa8.32□□□□□ -1.08
HIF3A-205ENST00000377670 LRCOL1A6NCL2 159 aa8.32□□□□□ -1.08
HIF3A-205ENST00000377670 GNRH2O43555 120 aa8.32□□□□□ -1.08
HIF3A-205ENST00000377670 TTTY13Q9BZ97 58 aa8.32□□□□□ -1.08
HIF3A-205ENST00000377670 FAM236AA0A1B0GUQ0 79 aa8.32□□□□□ -1.08
HIF3A-205ENST00000377670 FAM236BA0A1B0GV22 79 aa8.32□□□□□ -1.08
HIF3A-205ENST00000377670 CRYGCP07315 174 aa8.32□□□□□ -1.08
HIF3A-205ENST00000377670 KMT2EQ8IZD2 1858 aa8.32□□□□□ -1.08
HIF3A-205ENST00000377670 K7EQD1 137 aa8.32□□□□□ -1.08
HIF3A-205ENST00000377670 ZNF491Q8N8L2 437 aa8.32□□□□□ -1.08
HIF3A-205ENST00000377670 POLQO75417 2590 aa8.32□□□□□ -1.08
HIF3A-205ENST00000377670 PRSS47A8MTI9 375 aa8.32□□□□□ -1.08
HIF3A-205ENST00000377670 ACYP1P07311 99 aa8.32□□□□□ -1.08
HIF3A-205ENST00000377670 TRAV26-1A0A087WT03 109 aa8.31□□□□□ -1.08
HIF3A-205ENST00000377670 FOXI1Q12951 378 aa8.31□□□□□ -1.08
HIF3A-205ENST00000377670 Q8N7P7 452 aa8.31□□□□□ -1.08
HIF3A-205ENST00000377670 Q9H8V8 135 aa8.31□□□□□ -1.08
HIF3A-205ENST00000377670 FASNP49327 2511 aaKnown RBP8.31□□□□□ -1.08
HIF3A-205ENST00000377670 TEN1Q86WV5 123 aa8.31□□□□□ -1.08
HIF3A-205ENST00000377670 GTSF1Q8WW33 167 aa8.31□□□□□ -1.08
HIF3A-205ENST00000377670 MRPL36Q9P0J6 103 aaKnown RBP8.31□□□□□ -1.08
HIF3A-205ENST00000377670 IGKV3D-7A0A0C4DH55 119 aa8.31□□□□□ -1.08
HIF3A-205ENST00000377670 MUSTN1Q8IVN3 82 aa8.31□□□□□ -1.08
HIF3A-205ENST00000377670 ODF3L1Q8IXM7 274 aa8.31□□□□□ -1.08
HIF3A-205ENST00000377670 ABCA12Q86UK0 2595 aa8.31□□□□□ -1.08
HIF3A-205ENST00000377670 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.31□□□□□ -1.08
HIF3A-205ENST00000377670 IGKV2-29A2NJV5 120 aaPredicted RBP8.31□□□□□ -1.08
HIF3A-205ENST00000377670 Q6ZSV7 163 aa8.31□□□□□ -1.08
HIF3A-205ENST00000377670 RPL39LQ96EH5 51 aaKnown RBP8.31□□□□□ -1.08
HIF3A-205ENST00000377670 ORMDL1Q9P0S3 153 aa8.31□□□□□ -1.08
HIF3A-205ENST00000377670 TRANK1O15050 2925 aa8.3□□□□□ -1.08
HIF3A-205ENST00000377670 hADV29S1A0JD25 119 aa8.3□□□□□ -1.08
HIF3A-205ENST00000377670 LRRK2Q5S007 2527 aa8.3□□□□□ -1.08
HIF3A-205ENST00000377670 K7EMT4 169 aa8.3□□□□□ -1.08
HIF3A-205ENST00000377670 PRB2P02812 416 aaPredicted RBP8.3□□□□□ -1.08
HIF3A-205ENST00000377670 SMR3AQ99954 134 aa8.3□□□□□ -1.08
HIF3A-205ENST00000377670 A0A1B0GX51 115 aa8.3□□□□□ -1.08
HIF3A-205ENST00000377670 J3KT08 172 aa8.3□□□□□ -1.08
HIF3A-205ENST00000377670 A4D1N5 150 aa8.29□□□□□ -1.08
HIF3A-205ENST00000377670 FRMD6-AS1P0C7T7 363 aa8.29□□□□□ -1.08
HIF3A-205ENST00000377670 POU2AF1Q16633 256 aa8.29□□□□□ -1.08
HIF3A-205ENST00000377670 C1orf229Q6ZS94 237 aaPredicted RBP8.29□□□□□ -1.08
HIF3A-205ENST00000377670 PRRC2AP48634 2157 aaKnown RBP8.29□□□□□ -1.08
HIF3A-205ENST00000377670 M0R2N4 97 aa8.29□□□□□ -1.08
HIF3A-205ENST00000377670 PROP1O75360 226 aa8.29□□□□□ -1.08
HIF3A-205ENST00000377670 CDSNQ15517 529 aa8.29□□□□□ -1.08
HIF3A-205ENST00000377670 C5orf47Q569G3 176 aa8.29□□□□□ -1.08
HIF3A-205ENST00000377670 NDUFS5O43920 106 aa8.29□□□□□ -1.08
HIF3A-205ENST00000377670 TMEM61Q8N0U2 210 aa8.29□□□□□ -1.08
HIF3A-205ENST00000377670 AGPAT4-IT1Q9H0P7 198 aa8.29□□□□□ -1.08
HIF3A-205ENST00000377670 MSRB1Q9NZV6 116 aa8.29□□□□□ -1.08
HIF3A-205ENST00000377670 EPG5Q9HCE0 2579 aa8.29□□□□□ -1.08
HIF3A-205ENST00000377670 A0A0B4J2C4 111 aa8.28□□□□□ -1.08
HIF3A-205ENST00000377670 TRAV10A0A0B4J240 114 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms