RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 FAM19A4Q96LR4 140 aa12.82□□□□□ -0.36
TRIM27-201ENST00000377194 M0R381 172 aa12.81□□□□□ -0.36
TRIM27-201ENST00000377194 LYRM7Q5U5X0 104 aa12.81□□□□□ -0.36
TRIM27-201ENST00000377194 C2orf66Q6UXQ4 117 aa12.81□□□□□ -0.36
TRIM27-201ENST00000377194 KRTAP10-9P60411 292 aa12.81□□□□□ -0.36
TRIM27-201ENST00000377194 TEX15Q9BXT5 2789 aa12.81□□□□□ -0.36
TRIM27-201ENST00000377194 RHODO00212 210 aa12.8□□□□□ -0.36
TRIM27-201ENST00000377194 SLC25A20O43772 301 aa12.8□□□□□ -0.36
TRIM27-201ENST00000377194 SNCGO76070 127 aa12.8□□□□□ -0.36
TRIM27-201ENST00000377194 RNASE4P34096 147 aaKnown RBP12.8□□□□□ -0.36
TRIM27-201ENST00000377194 SBSPONQ8IVN8 264 aa12.8□□□□□ -0.36
TRIM27-201ENST00000377194 A0A0J9YY99 117 aa12.8□□□□□ -0.36
TRIM27-201ENST00000377194 SORL1Q92673 2214 aa12.79□□□□□ -0.36
TRIM27-201ENST00000377194 CREBBPQ92793 2442 aa12.79□□□□□ -0.36
TRIM27-201ENST00000377194 TRAV21A0A0B4J279 112 aa12.79□□□□□ -0.36
TRIM27-201ENST00000377194 TMEM262E9PQX1 116 aa12.79□□□□□ -0.36
TRIM27-201ENST00000377194 VCX2Q9H322 139 aa12.79□□□□□ -0.36
TRIM27-201ENST00000377194 ZNF469Q96JG9 3925 aaPredicted RBP12.79□□□□□ -0.36
TRIM27-201ENST00000377194 GAGE12JA6NER3 117 aa12.79□□□□□ -0.36
TRIM27-201ENST00000377194 C11orf86A6NJI1 115 aa12.79□□□□□ -0.36
TRIM27-201ENST00000377194 RNF223E7ERA6 249 aa12.79□□□□□ -0.36
TRIM27-201ENST00000377194 GNRH2O43555 120 aa12.79□□□□□ -0.36
TRIM27-201ENST00000377194 GAGE7O76087 117 aa12.79□□□□□ -0.36
TRIM27-201ENST00000377194 GAGE12FP0CL80 117 aa12.79□□□□□ -0.36
TRIM27-201ENST00000377194 GAGE12GP0CL81 117 aa12.79□□□□□ -0.36
TRIM27-201ENST00000377194 GAGE12IP0CL82 117 aa12.79□□□□□ -0.36
TRIM27-201ENST00000377194 GAGE4Q13068 117 aa12.79□□□□□ -0.36
TRIM27-201ENST00000377194 C14orf178Q8N769 122 aaPredicted RBP12.79□□□□□ -0.36
TRIM27-201ENST00000377194 TSPEAR-AS2P59090 65 aa12.78□□□□□ -0.36
TRIM27-201ENST00000377194 DCANP1Q8TF63 244 aa12.78□□□□□ -0.36
TRIM27-201ENST00000377194 MGPP08493 103 aa12.78□□□□□ -0.36
TRIM27-201ENST00000377194 RPL32P62910 135 aaKnown RBP12.78□□□□□ -0.36
TRIM27-201ENST00000377194 TTC32Q5I0X7 151 aa12.78□□□□□ -0.36
TRIM27-201ENST00000377194 C10orf126Q8N4M7 172 aa12.78□□□□□ -0.36
TRIM27-201ENST00000377194 ZNF580Q9UK33 172 aa12.78□□□□□ -0.36
TRIM27-201ENST00000377194 K7EMT4 169 aa12.77□□□□□ -0.36
TRIM27-201ENST00000377194 DUSP14O95147 198 aaKnown RBP12.77□□□□□ -0.36
TRIM27-201ENST00000377194 NTN5Q8WTR8 489 aaPredicted RBP12.77□□□□□ -0.36
TRIM27-201ENST00000377194 IGHV3-30P01768 117 aa12.76□□□□□ -0.37
TRIM27-201ENST00000377194 IGHV3-30-5P0DP03 117 aa12.76□□□□□ -0.37
TRIM27-201ENST00000377194 APRG1Q8IVJ8 170 aa12.76□□□□□ -0.37
TRIM27-201ENST00000377194 CRYGDP07320 174 aa12.76□□□□□ -0.37
TRIM27-201ENST00000377194 S100A4P26447 101 aaKnown RBP12.76□□□□□ -0.37
TRIM27-201ENST00000377194 FAM159AQ6UWV7 190 aa12.76□□□□□ -0.37
TRIM27-201ENST00000377194 ZNF843Q8N446 348 aa12.76□□□□□ -0.37
TRIM27-201ENST00000377194 PRO1854Q9UHT4 67 aa12.76□□□□□ -0.37
TRIM27-201ENST00000377194 TLN2Q9Y4G6 2542 aa12.76□□□□□ -0.37
TRIM27-201ENST00000377194 MUC4Q99102 2169 aa12.75□□□□□ -0.37
TRIM27-201ENST00000377194 ELANEP08246 267 aa12.75□□□□□ -0.37
TRIM27-201ENST00000377194 IFITM1P13164 125 aa12.75□□□□□ -0.37
TRIM27-201ENST00000377194 C3orf56Q8N813 242 aa12.75□□□□□ -0.37
TRIM27-201ENST00000377194 RNASE3P12724 160 aaKnown RBP12.75□□□□□ -0.37
TRIM27-201ENST00000377194 DPH3P1Q9H4G8 78 aa12.75□□□□□ -0.37
TRIM27-201ENST00000377194 J3QLI3 93 aa12.75□□□□□ -0.37
TRIM27-201ENST00000377194 ASIPP42127 132 aa12.75□□□□□ -0.37
TRIM27-201ENST00000377194 CR1P17927 2039 aa12.74□□□□□ -0.37
TRIM27-201ENST00000377194 BEX4Q9NWD9 120 aaPredicted RBP12.74□□□□□ -0.37
TRIM27-201ENST00000377194 PHLDA3Q9Y5J5 127 aa12.74□□□□□ -0.37
TRIM27-201ENST00000377194 IGLV4-69A0A075B6H9 119 aa12.74□□□□□ -0.37
TRIM27-201ENST00000377194 TEX49A0A1B0GTD5 131 aa12.74□□□□□ -0.37
TRIM27-201ENST00000377194 EIF4EBP3O60516 100 aaPredicted RBP12.74□□□□□ -0.37
TRIM27-201ENST00000377194 TMEM170BQ5T4T1 132 aa12.74□□□□□ -0.37
TRIM27-201ENST00000377194 Q8N1Y9 231 aa12.74□□□□□ -0.37
TRIM27-201ENST00000377194 MYO9AB2RTY4 2548 aa12.73□□□□□ -0.37
TRIM27-201ENST00000377194 NBPF19A0A087WUL8 3843 aa12.73□□□□□ -0.37
TRIM27-201ENST00000377194 IGHV4-31P0DP07 118 aa12.73□□□□□ -0.37
TRIM27-201ENST00000377194 FAM110AQ9BQ89 295 aa12.73□□□□□ -0.37
TRIM27-201ENST00000377194 KLLNB2CW77 178 aa12.73□□□□□ -0.37
TRIM27-201ENST00000377194 VPREB3Q9UKI3 123 aa12.73□□□□□ -0.37
TRIM27-201ENST00000377194 A4D1N5 150 aa12.72□□□□□ -0.37
TRIM27-201ENST00000377194 TSHBP01222 138 aa12.72□□□□□ -0.37
TRIM27-201ENST00000377194 FSHBP01225 129 aa12.72□□□□□ -0.37
TRIM27-201ENST00000377194 DUX5Q96PT3 197 aa12.72□□□□□ -0.37
TRIM27-201ENST00000377194 SYNJ2BPP57105 145 aa12.71□□□□□ -0.37
TRIM27-201ENST00000377194 RPL39P62891 51 aaKnown RBP12.71□□□□□ -0.37
TRIM27-201ENST00000377194 Q6YL49 198 aa12.71□□□□□ -0.37
TRIM27-201ENST00000377194 C15orf53Q8NAA6 179 aa12.71□□□□□ -0.37
TRIM27-201ENST00000377194 ID1P41134 155 aa12.71□□□□□ -0.38
TRIM27-201ENST00000377194 HERVK_113P61574 105 aa12.71□□□□□ -0.38
TRIM27-201ENST00000377194 Q1RN00 199 aa12.71□□□□□ -0.38
TRIM27-201ENST00000377194 SLC25A29Q8N8R3 303 aa12.71□□□□□ -0.38
TRIM27-201ENST00000377194 ZNF702PQ9H963 129 aa12.71□□□□□ -0.38
TRIM27-201ENST00000377194 TP53TG1Q9Y2A0 90 aa12.71□□□□□ -0.38
TRIM27-201ENST00000377194 APCP25054 2843 aa12.71□□□□□ -0.38
TRIM27-201ENST00000377194 IGHV3-64A0A075B6Q5 118 aa12.7□□□□□ -0.38
TRIM27-201ENST00000377194 ODF3Q96PU9 254 aa12.7□□□□□ -0.38
TRIM27-201ENST00000377194 IGHV4OR15-8A0A075B7B6 117 aa12.7□□□□□ -0.38
TRIM27-201ENST00000377194 A0A087WW49 117 aa12.7□□□□□ -0.38
TRIM27-201ENST00000377194 TRAV2A0A0B4J234 112 aa12.69□□□□□ -0.38
TRIM27-201ENST00000377194 TRAV12-3A0A0B4J271 114 aa12.69□□□□□ -0.38
TRIM27-201ENST00000377194 TMEM89A2RUT3 159 aa12.69□□□□□ -0.38
TRIM27-201ENST00000377194 IGKV3-20P01619 116 aa12.69□□□□□ -0.38
TRIM27-201ENST00000377194 TRAV8-4A0A0B4J246 113 aa12.68□□□□□ -0.38
TRIM27-201ENST00000377194 IGHV3-33P01772 117 aa12.68□□□□□ -0.38
TRIM27-201ENST00000377194 JPT2Q9H910 190 aa12.68□□□□□ -0.38
TRIM27-201ENST00000377194 SONP18583 2426 aaKnown RBP12.68□□□□□ -0.38
TRIM27-201ENST00000377194 MED14OSP0DP75 135 aa12.68□□□□□ -0.38
TRIM27-201ENST00000377194 ZNRF2Q8NHG8 242 aa12.68□□□□□ -0.38
TRIM27-201ENST00000377194 TRAV12-2A0A075B6T6 113 aa12.67□□□□□ -0.38
TRIM27-201ENST00000377194 HOXD3P31249 432 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms