RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 SCXQ7RTU7 201 aa9.3□□□□□ -0.92
UBXN11-207ENST00000374223 TCTE3Q8IZS6 198 aa9.3□□□□□ -0.92
UBXN11-207ENST00000374223 LINC00528Q8N1L1 170 aa9.3□□□□□ -0.92
UBXN11-207ENST00000374223 C15orf54Q8N8G6 183 aa9.3□□□□□ -0.92
UBXN11-207ENST00000374223 URGCP-MRPS24S4R325 110 aa9.3□□□□□ -0.92
UBXN11-207ENST00000374223 TRBV20OR9-2A0A075B6H5 130 aa9.29□□□□□ -0.92
UBXN11-207ENST00000374223 A0A087WX48 190 aa9.29□□□□□ -0.92
UBXN11-207ENST00000374223 CXCL1P09341 107 aa9.29□□□□□ -0.92
UBXN11-207ENST00000374223 OR5AL1P0C617 328 aa9.29□□□□□ -0.92
UBXN11-207ENST00000374223 KRTAP10-4P60372 401 aaPredicted RBP9.29□□□□□ -0.92
UBXN11-207ENST00000374223 CENPWQ5EE01 88 aa9.29□□□□□ -0.92
UBXN11-207ENST00000374223 SPANXN1Q5VSR9 72 aa9.29□□□□□ -0.92
UBXN11-207ENST00000374223 ATRAIDQ6UW56 229 aa9.29□□□□□ -0.92
UBXN11-207ENST00000374223 CLPSL2Q6UWE3 100 aa9.29□□□□□ -0.92
UBXN11-207ENST00000374223 C11orf52Q96A22 123 aa9.29□□□□□ -0.92
UBXN11-207ENST00000374223 F5H697 171 aa9.28□□□□□ -0.92
UBXN11-207ENST00000374223 S100A9P06702 114 aaKnown RBP9.28□□□□□ -0.92
UBXN11-207ENST00000374223 IGLC6P0CF74 106 aa9.28□□□□□ -0.92
UBXN11-207ENST00000374223 TOR2AQ5JU69 321 aa9.28□□□□□ -0.92
UBXN11-207ENST00000374223 KRTAP26-1Q6PEX3 210 aa9.28□□□□□ -0.92
UBXN11-207ENST00000374223 C19orf71A6NCJ1 209 aa9.27□□□□□ -0.93
UBXN11-207ENST00000374223 GAGE6Q13070 117 aa9.27□□□□□ -0.93
UBXN11-207ENST00000374223 ANGP03950 147 aaKnown RBP9.26□□□□□ -0.93
UBXN11-207ENST00000374223 MGPP08493 103 aa9.26□□□□□ -0.93
UBXN11-207ENST00000374223 SERTAD4-AS1Q5TG53 156 aa9.26□□□□□ -0.93
UBXN11-207ENST00000374223 CIRBP-AS1Q8TBR5 109 aa9.26□□□□□ -0.93
UBXN11-207ENST00000374223 CHCHD5Q9BSY4 110 aa9.26□□□□□ -0.93
UBXN11-207ENST00000374223 TPPP3Q9BW30 176 aa9.26□□□□□ -0.93
UBXN11-207ENST00000374223 TRAV1-1A0A0B4J248 108 aa9.25□□□□□ -0.93
UBXN11-207ENST00000374223 SUMO4Q6EEV6 95 aa9.25□□□□□ -0.93
UBXN11-207ENST00000374223 OR2D3Q8NGH3 330 aa9.25□□□□□ -0.93
UBXN11-207ENST00000374223 GFRA4Q9GZZ7 299 aa9.25□□□□□ -0.93
UBXN11-207ENST00000374223 USP17L23D6RBM5 183 aa9.24□□□□□ -0.93
UBXN11-207ENST00000374223 PANO1I0J062 215 aa9.24□□□□□ -0.93
UBXN11-207ENST00000374223 M0QY20 66 aa9.24□□□□□ -0.93
UBXN11-207ENST00000374223 PRSS1P07477 247 aa9.24□□□□□ -0.93
UBXN11-207ENST00000374223 SULT1A2P50226 295 aa9.24□□□□□ -0.93
UBXN11-207ENST00000374223 RBX1P62877 108 aa9.24□□□□□ -0.93
UBXN11-207ENST00000374223 FER1L6-AS1Q8NA97 138 aa9.24□□□□□ -0.93
UBXN11-207ENST00000374223 RMI2Q96E14 147 aa9.24□□□□□ -0.93
UBXN11-207ENST00000374223 CHCHD7Q9BUK0 85 aa9.24□□□□□ -0.93
UBXN11-207ENST00000374223 MANBALQ9NQG1 85 aa9.24□□□□□ -0.93
UBXN11-207ENST00000374223 VAX2Q9UIW0 290 aa9.24□□□□□ -0.93
UBXN11-207ENST00000374223 HLA-DQA1P01909 254 aa9.23□□□□□ -0.93
UBXN11-207ENST00000374223 LYZL1Q6UWQ5 148 aa9.23□□□□□ -0.93
UBXN11-207ENST00000374223 LINC00269Q8N2A0 174 aa9.23□□□□□ -0.93
UBXN11-207ENST00000374223 CHAC1Q9BUX1 264 aa9.23□□□□□ -0.93
UBXN11-207ENST00000374223 C1orf43Q9BWL3 253 aa9.23□□□□□ -0.93
UBXN11-207ENST00000374223 COX11Q9Y6N1 276 aa9.23□□□□□ -0.93
UBXN11-207ENST00000374223 NKX2-5P52952 324 aaPredicted RBP9.22□□□□□ -0.93
UBXN11-207ENST00000374223 AP1S3Q96PC3 154 aa9.22□□□□□ -0.93
UBXN11-207ENST00000374223 IGLV4-60A0A075B6I1 120 aa9.21□□□□□ -0.94
UBXN11-207ENST00000374223 IGLV10-54A0A075B6I4 117 aa9.21□□□□□ -0.94
UBXN11-207ENST00000374223 K7EN84 100 aa9.21□□□□□ -0.94
UBXN11-207ENST00000374223 FOXA3P55318 350 aaPredicted RBP9.21□□□□□ -0.94
UBXN11-207ENST00000374223 EIF5AP63241 154 aaKnown RBP9.21□□□□□ -0.94
UBXN11-207ENST00000374223 MEF2BQ02080 365 aaPredicted RBP9.21□□□□□ -0.94
UBXN11-207ENST00000374223 Q0VG73 95 aa9.21□□□□□ -0.94
UBXN11-207ENST00000374223 ELOBQ15370 118 aa9.21□□□□□ -0.94
UBXN11-207ENST00000374223 C20orf203Q8NBC4 194 aa9.21□□□□□ -0.94
UBXN11-207ENST00000374223 NUDT10Q8NFP7 164 aa9.21□□□□□ -0.94
UBXN11-207ENST00000374223 NUDT11Q96G61 164 aa9.21□□□□□ -0.94
UBXN11-207ENST00000374223 PRR34Q9NV39 138 aa9.21□□□□□ -0.94
UBXN11-207ENST00000374223 MED9Q9NWA0 146 aa9.21□□□□□ -0.94
UBXN11-207ENST00000374223 SMIM17P0DL12 118 aa9.2□□□□□ -0.94
UBXN11-207ENST00000374223 GNG4P50150 75 aa9.2□□□□□ -0.94
UBXN11-207ENST00000374223 HNRNPA3P51991 378 aaKnown RBP9.2□□□□□ -0.94
UBXN11-207ENST00000374223 KCNIP4Q6PIL6 250 aa9.2□□□□□ -0.94
UBXN11-207ENST00000374223 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.2□□□□□ -0.94
UBXN11-207ENST00000374223 HMCN2Q8NDA2 5059 aa9.2□□□□□ -0.94
UBXN11-207ENST00000374223 CRPP02741 224 aa9.19□□□□□ -0.94
UBXN11-207ENST00000374223 BCL2P10415 239 aa9.19□□□□□ -0.94
UBXN11-207ENST00000374223 NTF3P20783 257 aa9.19□□□□□ -0.94
UBXN11-207ENST00000374223 RAB5CP51148 216 aa9.19□□□□□ -0.94
UBXN11-207ENST00000374223 IQCJQ1A5X6 159 aa9.19□□□□□ -0.94
UBXN11-207ENST00000374223 OCC1Q8TAD7 63 aa9.19□□□□□ -0.94
UBXN11-207ENST00000374223 RNASE7Q9H1E1 156 aaKnown RBP9.19□□□□□ -0.94
UBXN11-207ENST00000374223 TRAV26-2A0A0B4J265 109 aa9.18□□□□□ -0.94
UBXN11-207ENST00000374223 OXTP01178 125 aa9.18□□□□□ -0.94
UBXN11-207ENST00000374223 P01737 135 aa9.18□□□□□ -0.94
UBXN11-207ENST00000374223 SLPIP03973 132 aa9.18□□□□□ -0.94
UBXN11-207ENST00000374223 DAZAP1Q96EP5 407 aaKnown RBP9.18□□□□□ -0.94
UBXN11-207ENST00000374223 TRBV25-1A0A075B6N4 114 aa9.17□□□□□ -0.94
UBXN11-207ENST00000374223 IGHV1-24A0A0C4DH33 117 aa9.17□□□□□ -0.94
UBXN11-207ENST00000374223 MIAQ16674 131 aa9.17□□□□□ -0.94
UBXN11-207ENST00000374223 IFNA1P01562 189 aa9.16□□□□□ -0.94
UBXN11-207ENST00000374223 RPS20P60866 119 aaKnown RBP9.16□□□□□ -0.94
UBXN11-207ENST00000374223 CACNG7P62955 275 aa9.16□□□□□ -0.94
UBXN11-207ENST00000374223 RASL11AQ6T310 242 aa9.16□□□□□ -0.94
UBXN11-207ENST00000374223 GATD1Q8NB37 220 aa9.16□□□□□ -0.94
UBXN11-207ENST00000374223 GTSF1Q8WW33 167 aa9.16□□□□□ -0.94
UBXN11-207ENST00000374223 RPL39LQ96EH5 51 aaKnown RBP9.16□□□□□ -0.94
UBXN11-207ENST00000374223 PDE6DO43924 150 aa9.15□□□□□ -0.94
UBXN11-207ENST00000374223 GAS8-AS1O95177 125 aa9.15□□□□□ -0.94
UBXN11-207ENST00000374223 CTRLP40313 264 aa9.15□□□□□ -0.94
UBXN11-207ENST00000374223 REG3AQ06141 175 aa9.15□□□□□ -0.94
UBXN11-207ENST00000374223 C9orf62Q8N4C0 152 aa9.15□□□□□ -0.94
UBXN11-207ENST00000374223 SLC51BQ86UW2 128 aa9.14□□□□□ -0.95
UBXN11-207ENST00000374223 C9orf163Q8N9P6 203 aa9.14□□□□□ -0.95
UBXN11-207ENST00000374223 DPH3P1Q9H4G8 78 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms