RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 SPATA12Q7Z6I5 190 aa14.25□□□□□ -0.13
TMEM54-202ENST00000373463 NIT1Q86X76 327 aa14.25□□□□□ -0.13
TMEM54-202ENST00000373463 TRGC1P0CF51 173 aa14.24□□□□□ -0.13
TMEM54-202ENST00000373463 ERVFC1-1P60608 527 aa14.24□□□□□ -0.13
TMEM54-202ENST00000373463 DAZ4Q86SG3 579 aaKnown RBP14.24□□□□□ -0.13
TMEM54-202ENST00000373463 DAZ3Q9NR90 486 aaKnown RBP14.24□□□□□ -0.13
TMEM54-202ENST00000373463 CT83Q5H943 113 aa14.23□□□□□ -0.13
TMEM54-202ENST00000373463 NTM-AS1Q6ZSK4 140 aa14.23□□□□□ -0.13
TMEM54-202ENST00000373463 A8MWL6 223 aa14.22□□□□□ -0.13
TMEM54-202ENST00000373463 FOXA3P55318 350 aaPredicted RBP14.22□□□□□ -0.13
TMEM54-202ENST00000373463 TWIST1Q15672 202 aa14.22□□□□□ -0.13
TMEM54-202ENST00000373463 DPH3P1Q9H4G8 78 aa14.22□□□□□ -0.13
TMEM54-202ENST00000373463 Q9HAA7 133 aa14.22□□□□□ -0.13
TMEM54-202ENST00000373463 OSTCQ9NRP0 149 aa14.22□□□□□ -0.13
TMEM54-202ENST00000373463 A0A087WTM6 91 aa14.21□□□□□ -0.13
TMEM54-202ENST00000373463 TRBV6-8A0A0A6YYG3 113 aa14.21□□□□□ -0.13
TMEM54-202ENST00000373463 RPL23P62829 140 aaKnown RBP14.21□□□□□ -0.13
TMEM54-202ENST00000373463 ISOC2Q96AB3 205 aa14.21□□□□□ -0.13
TMEM54-202ENST00000373463 PGLYRP4Q96LB8 373 aa14.21□□□□□ -0.13
TMEM54-202ENST00000373463 V9GYV3 84 aa14.21□□□□□ -0.13
TMEM54-202ENST00000373463 C16orf90A8MZG2 172 aa14.2□□□□□ -0.14
TMEM54-202ENST00000373463 FUSP35637 526 aaKnown RBP eCLIP14.2□□□□□ -0.14
TMEM54-202ENST00000373463 LAGE3Q14657 143 aa14.2□□□□□ -0.14
TMEM54-202ENST00000373463 DNAJC30Q96LL9 226 aa14.2□□□□□ -0.14
TMEM54-202ENST00000373463 PEA15Q15121 130 aa14.19□□□□□ -0.14
TMEM54-202ENST00000373463 TMEM241Q24JQ0 296 aa14.19□□□□□ -0.14
TMEM54-202ENST00000373463 FAM74A3Q4VXF1 159 aa14.19□□□□□ -0.14
TMEM54-202ENST00000373463 LRP1BQ9NZR2 4599 aa14.19□□□□□ -0.14
TMEM54-202ENST00000373463 DNAH5Q8TE73 4624 aa14.18□□□□□ -0.14
TMEM54-202ENST00000373463 LRCOL1A6NCL2 159 aa14.18□□□□□ -0.14
TMEM54-202ENST00000373463 RASL11AQ6T310 242 aa14.18□□□□□ -0.14
TMEM54-202ENST00000373463 TSKUQ8WUA8 353 aa14.18□□□□□ -0.14
TMEM54-202ENST00000373463 SMDT1Q9H4I9 107 aa14.18□□□□□ -0.14
TMEM54-202ENST00000373463 H7C1H1 209 aa14.17□□□□□ -0.14
TMEM54-202ENST00000373463 GATD1Q8NB37 220 aa14.17□□□□□ -0.14
TMEM54-202ENST00000373463 TRAV26-2A0A0B4J265 109 aa14.16□□□□□ -0.14
TMEM54-202ENST00000373463 HIGD1CA8MV81 97 aa14.16□□□□□ -0.14
TMEM54-202ENST00000373463 GFRA4Q9GZZ7 299 aa14.16□□□□□ -0.14
TMEM54-202ENST00000373463 NAT8Q9UHE5 227 aa14.16□□□□□ -0.14
TMEM54-202ENST00000373463 ADIRFQ15847 76 aa14.15□□□□□ -0.14
TMEM54-202ENST00000373463 NIT2Q9NQR4 276 aa14.15□□□□□ -0.14
TMEM54-202ENST00000373463 KLK12Q9UKR0 248 aa14.15□□□□□ -0.14
TMEM54-202ENST00000373463 FAM231BA6NCW3 169 aa14.14□□□□□ -0.15
TMEM54-202ENST00000373463 MPV17L2Q567V2 206 aa14.14□□□□□ -0.15
TMEM54-202ENST00000373463 MAPKAPK5-AS1Q8N8E1 139 aa14.14□□□□□ -0.15
TMEM54-202ENST00000373463 CHCHD7Q9BUK0 85 aa14.14□□□□□ -0.15
TMEM54-202ENST00000373463 IFITM2Q01629 132 aa14.13□□□□□ -0.15
TMEM54-202ENST00000373463 WFDC2Q14508 124 aa14.13□□□□□ -0.15
TMEM54-202ENST00000373463 C15orf54Q8N8G6 183 aa14.13□□□□□ -0.15
TMEM54-202ENST00000373463 RPL39LQ96EH5 51 aaKnown RBP14.13□□□□□ -0.15
TMEM54-202ENST00000373463 URGCP-MRPS24S4R325 110 aa14.13□□□□□ -0.15
TMEM54-202ENST00000373463 RYR1P21817 5038 aa14.13□□□□□ -0.15
TMEM54-202ENST00000373463 A0A087WX48 190 aa14.12□□□□□ -0.15
TMEM54-202ENST00000373463 A0A1B0GUT8 65 aa14.12□□□□□ -0.15
TMEM54-202ENST00000373463 GAS8-AS1O95177 125 aa14.12□□□□□ -0.15
TMEM54-202ENST00000373463 IQCJQ1A5X6 159 aa14.12□□□□□ -0.15
TMEM54-202ENST00000373463 NUP35Q8NFH5 326 aa14.12□□□□□ -0.15
TMEM54-202ENST00000373463 DEFB104AQ8WTQ1 72 aa14.12□□□□□ -0.15
TMEM54-202ENST00000373463 KRTAP17-1Q9BYP8 105 aa14.12□□□□□ -0.15
TMEM54-202ENST00000373463 TRAV8-3A0A0A6YYJ7 113 aa14.11□□□□□ -0.15
TMEM54-202ENST00000373463 PSCAO43653 123 aa14.11□□□□□ -0.15
TMEM54-202ENST00000373463 TMEM97Q5BJF2 176 aa14.11□□□□□ -0.15
TMEM54-202ENST00000373463 CHCHD5Q9BSY4 110 aa14.11□□□□□ -0.15
TMEM54-202ENST00000373463 TMEM262E9PQX1 116 aa14.1□□□□□ -0.15
TMEM54-202ENST00000373463 ATRAIDQ6UW56 229 aa14.1□□□□□ -0.15
TMEM54-202ENST00000373463 Q8N976 141 aa14.1□□□□□ -0.15
TMEM54-202ENST00000373463 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.1□□□□□ -0.15
TMEM54-202ENST00000373463 RNF185Q96GF1 192 aa14.1□□□□□ -0.15
TMEM54-202ENST00000373463 EREGO14944 169 aa14.09□□□□□ -0.15
TMEM54-202ENST00000373463 GAGE6Q13070 117 aa14.09□□□□□ -0.15
TMEM54-202ENST00000373463 ENHOQ6UWT2 76 aa14.09□□□□□ -0.15
TMEM54-202ENST00000373463 FRZBQ92765 325 aa14.09□□□□□ -0.15
TMEM54-202ENST00000373463 UBE2WQ96B02 151 aa14.09□□□□□ -0.15
TMEM54-202ENST00000373463 PGPEP1Q9NXJ5 209 aa14.09□□□□□ -0.15
TMEM54-202ENST00000373463 TRBV25-1A0A075B6N4 114 aa14.08□□□□□ -0.16
TMEM54-202ENST00000373463 IGHV1-24A0A0C4DH33 117 aa14.08□□□□□ -0.16
TMEM54-202ENST00000373463 SMIM27A0A1W2PRY6 76 aa14.08□□□□□ -0.16
TMEM54-202ENST00000373463 CLLU1Q5K131 121 aa14.08□□□□□ -0.16
TMEM54-202ENST00000373463 SMIM15Q7Z3B0 74 aa14.08□□□□□ -0.16
TMEM54-202ENST00000373463 TM2D2Q9BX73 214 aa14.08□□□□□ -0.16
TMEM54-202ENST00000373463 TMEM191AQ9H0A3 160 aa14.08□□□□□ -0.16
TMEM54-202ENST00000373463 RBX1P62877 108 aa14.07□□□□□ -0.16
TMEM54-202ENST00000373463 BORCS7Q96B45 105 aa14.07□□□□□ -0.16
TMEM54-202ENST00000373463 APOBP04114 4563 aaKnown RBP14.07□□□□□ -0.16
TMEM54-202ENST00000373463 RAB14P61106 215 aa14.06□□□□□ -0.16
TMEM54-202ENST00000373463 ELOBQ15370 118 aa14.06□□□□□ -0.16
TMEM54-202ENST00000373463 CDPF1Q6NVV7 123 aa14.06□□□□□ -0.16
TMEM54-202ENST00000373463 NAT8BQ9UHF3 227 aa14.06□□□□□ -0.16
TMEM54-202ENST00000373463 CDK2AP2O75956 126 aa14.05□□□□□ -0.16
TMEM54-202ENST00000373463 RAB4AP20338 218 aa14.05□□□□□ -0.16
TMEM54-202ENST00000373463 KCNIP4Q6PIL6 250 aa14.05□□□□□ -0.16
TMEM54-202ENST00000373463 AMN1Q8IY45 258 aa14.05□□□□□ -0.16
TMEM54-202ENST00000373463 Q8N814 137 aa14.05□□□□□ -0.16
TMEM54-202ENST00000373463 HSPG2P98160 4391 aa14.05□□□□□ -0.16
TMEM54-202ENST00000373463 IGKV2D-24A0A075B6R9 120 aa14.04□□□□□ -0.16
TMEM54-202ENST00000373463 LECT2O14960 151 aa14.04□□□□□ -0.16
TMEM54-202ENST00000373463 ANGP03950 147 aaKnown RBP14.04□□□□□ -0.16
TMEM54-202ENST00000373463 RPS10P46783 165 aaKnown RBP14.04□□□□□ -0.16
TMEM54-202ENST00000373463 KRTAP10-1P60331 282 aa14.04□□□□□ -0.16
TMEM54-202ENST00000373463 TMEM243Q9BU79 118 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms