RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 SCXQ7RTU7 201 aa10.86□□□□□ -0.67
RAPGEF1-202ENST00000372190 C4orf48Q5BLP8 95 aa10.86□□□□□ -0.67
RAPGEF1-202ENST00000372190 GTSF1Q8WW33 167 aa10.86□□□□□ -0.67
RAPGEF1-202ENST00000372190 IGKV1OR2-108A0A075B7D4 117 aa10.86□□□□□ -0.67
RAPGEF1-202ENST00000372190 DOCK11Q5JSL3 2073 aa10.86□□□□□ -0.67
RAPGEF1-202ENST00000372190 TOMM6Q96B49 74 aa10.86□□□□□ -0.67
RAPGEF1-202ENST00000372190 IGF2BP2-AS1Q96M15 143 aa10.86□□□□□ -0.67
RAPGEF1-202ENST00000372190 LRRK1Q38SD2 2015 aa10.86□□□□□ -0.67
RAPGEF1-202ENST00000372190 MIFP14174 115 aa10.85□□□□□ -0.67
RAPGEF1-202ENST00000372190 YPEL4Q96NS1 127 aa10.85□□□□□ -0.67
RAPGEF1-202ENST00000372190 MIAQ16674 131 aa10.85□□□□□ -0.67
RAPGEF1-202ENST00000372190 DEFB136Q30KP8 78 aa10.85□□□□□ -0.67
RAPGEF1-202ENST00000372190 ZNF491Q8N8L2 437 aa10.85□□□□□ -0.67
RAPGEF1-202ENST00000372190 C11orf53Q8IXP5 236 aa10.84□□□□□ -0.67
RAPGEF1-202ENST00000372190 PLXNB3Q9ULL4 1909 aa10.84□□□□□ -0.67
RAPGEF1-202ENST00000372190 IGHV7-4-1A0A0J9YVY3 117 aa10.84□□□□□ -0.67
RAPGEF1-202ENST00000372190 WFDC10AQ9H1F0 79 aa10.84□□□□□ -0.67
RAPGEF1-202ENST00000372190 WISP2O76076 250 aa10.83□□□□□ -0.67
RAPGEF1-202ENST00000372190 WT1-ASQ06250 92 aa10.83□□□□□ -0.68
RAPGEF1-202ENST00000372190 WFDC10BQ8IUB3 73 aa10.83□□□□□ -0.68
RAPGEF1-202ENST00000372190 ZGRF1Q86YA3 2104 aa10.83□□□□□ -0.68
RAPGEF1-202ENST00000372190 ODF1Q14990 250 aa10.83□□□□□ -0.68
RAPGEF1-202ENST00000372190 LINC00526Q96FQ7 95 aa10.83□□□□□ -0.68
RAPGEF1-202ENST00000372190 IGHV1-58A0A0C4DH39 117 aa10.82□□□□□ -0.68
RAPGEF1-202ENST00000372190 IGLV3-1P01715 115 aa10.82□□□□□ -0.68
RAPGEF1-202ENST00000372190 P0DMU3 169 aa10.82□□□□□ -0.68
RAPGEF1-202ENST00000372190 FAM231AP0DMU4 169 aa10.82□□□□□ -0.68
RAPGEF1-202ENST00000372190 FAM231CP0DMU5 169 aa10.82□□□□□ -0.68
RAPGEF1-202ENST00000372190 AKAP6Q13023 2319 aa10.82□□□□□ -0.68
RAPGEF1-202ENST00000372190 MIR7-3HGQ8N6C7 128 aa10.82□□□□□ -0.68
RAPGEF1-202ENST00000372190 DOCK7Q96N67 2140 aa10.82□□□□□ -0.68
RAPGEF1-202ENST00000372190 NDUFA1O15239 70 aa10.82□□□□□ -0.68
RAPGEF1-202ENST00000372190 RPL39LQ96EH5 51 aaKnown RBP10.82□□□□□ -0.68
RAPGEF1-202ENST00000372190 OBSL1O75147 1896 aa10.82□□□□□ -0.68
RAPGEF1-202ENST00000372190 PRR20EP86478 221 aa10.82□□□□□ -0.68
RAPGEF1-202ENST00000372190 PRR20CP86479 221 aa10.82□□□□□ -0.68
RAPGEF1-202ENST00000372190 PRR20DP86480 221 aa10.82□□□□□ -0.68
RAPGEF1-202ENST00000372190 PRR20BP86481 221 aa10.82□□□□□ -0.68
RAPGEF1-202ENST00000372190 PRR20AP86496 221 aa10.82□□□□□ -0.68
RAPGEF1-202ENST00000372190 A0A096LPF7 62 aa10.82□□□□□ -0.68
RAPGEF1-202ENST00000372190 LENEPQ9Y5L5 61 aa10.82□□□□□ -0.68
RAPGEF1-202ENST00000372190 MRPS12O15235 138 aaKnown RBP10.81□□□□□ -0.68
RAPGEF1-202ENST00000372190 ZFAND3Q9H8U3 227 aa10.81□□□□□ -0.68
RAPGEF1-202ENST00000372190 TRBV7-3A0A075B6L6 115 aa10.81□□□□□ -0.68
RAPGEF1-202ENST00000372190 XGP55808 180 aa10.81□□□□□ -0.68
RAPGEF1-202ENST00000372190 CHD3Q12873 2000 aaKnown RBP10.81□□□□□ -0.68
RAPGEF1-202ENST00000372190 GP9P14770 177 aa10.81□□□□□ -0.68
RAPGEF1-202ENST00000372190 PLA2G2AP14555 144 aa10.8□□□□□ -0.68
RAPGEF1-202ENST00000372190 SLURP1P55000 103 aa10.8□□□□□ -0.68
RAPGEF1-202ENST00000372190 Q6ZQT7 251 aa10.8□□□□□ -0.68
RAPGEF1-202ENST00000372190 ZFP36P26651 326 aaKnown RBP10.8□□□□□ -0.68
RAPGEF1-202ENST00000372190 TM2D2Q9BX73 214 aa10.79□□□□□ -0.68
RAPGEF1-202ENST00000372190 EBI3Q14213 229 aa10.79□□□□□ -0.68
RAPGEF1-202ENST00000372190 HEATR5AQ86XA9 2040 aa10.79□□□□□ -0.68
RAPGEF1-202ENST00000372190 GNRH2O43555 120 aa10.79□□□□□ -0.68
RAPGEF1-202ENST00000372190 PKDREJQ9NTG1 2253 aa10.79□□□□□ -0.68
RAPGEF1-202ENST00000372190 NFE4Q86UQ8 179 aa10.79□□□□□ -0.68
RAPGEF1-202ENST00000372190 TRAV7A0A075B6U4 112 aa10.79□□□□□ -0.68
RAPGEF1-202ENST00000372190 TMEM131Q92545 1883 aa10.79□□□□□ -0.68
RAPGEF1-202ENST00000372190 A0A0J9YWU9 116 aa10.78□□□□□ -0.68
RAPGEF1-202ENST00000372190 SPTBN1Q01082 2364 aaKnown RBP10.78□□□□□ -0.68
RAPGEF1-202ENST00000372190 CXCL6P80162 114 aa10.78□□□□□ -0.68
RAPGEF1-202ENST00000372190 KRTAP27-1Q3LI81 207 aa10.78□□□□□ -0.68
RAPGEF1-202ENST00000372190 NBASA2RRP1 2371 aa10.78□□□□□ -0.68
RAPGEF1-202ENST00000372190 TRBV30A0A0K0K1B3 111 aa10.77□□□□□ -0.69
RAPGEF1-202ENST00000372190 Q6JHZ5 121 aa10.77□□□□□ -0.69
RAPGEF1-202ENST00000372190 ROS1P08922 2347 aa10.77□□□□□ -0.69
RAPGEF1-202ENST00000372190 INAFM1C9JVW0 142 aa10.77□□□□□ -0.69
RAPGEF1-202ENST00000372190 LRCOL1A6NCL2 159 aa10.77□□□□□ -0.69
RAPGEF1-202ENST00000372190 PSPHP1O15172 72 aa10.77□□□□□ -0.69
RAPGEF1-202ENST00000372190 DNAJC9-AS1A6NH13 148 aa10.76□□□□□ -0.69
RAPGEF1-202ENST00000372190 KIAA2026Q5HYC2 2103 aa10.76□□□□□ -0.69
RAPGEF1-202ENST00000372190 NPBQ8NG41 125 aa10.76□□□□□ -0.69
RAPGEF1-202ENST00000372190 B9D2Q9BPU9 175 aa10.76□□□□□ -0.69
RAPGEF1-202ENST00000372190 K7EQD1 137 aa10.76□□□□□ -0.69
RAPGEF1-202ENST00000372190 IGHV4-31P0DP07 118 aa10.75□□□□□ -0.69
RAPGEF1-202ENST00000372190 IGHV3-30-3P0DP02 117 aa10.74□□□□□ -0.69
RAPGEF1-202ENST00000372190 MYCNOSP40205 109 aa10.74□□□□□ -0.69
RAPGEF1-202ENST00000372190 SIRPDQ9H106 197 aa10.74□□□□□ -0.69
RAPGEF1-202ENST00000372190 KIAA1549LQ6ZVL6 1849 aa10.74□□□□□ -0.69
RAPGEF1-202ENST00000372190 RPL39P62891 51 aaKnown RBP10.74□□□□□ -0.69
RAPGEF1-202ENST00000372190 C5orf56Q8N8D9 126 aa10.74□□□□□ -0.69
RAPGEF1-202ENST00000372190 A0A0J9YXY3 114 aa10.74□□□□□ -0.69
RAPGEF1-202ENST00000372190 GTF3C1Q12789 2109 aa10.74□□□□□ -0.69
RAPGEF1-202ENST00000372190 IGHV7-81A0A0B4J1V7 117 aa10.73□□□□□ -0.69
RAPGEF1-202ENST00000372190 UBE2D2P62837 147 aa10.73□□□□□ -0.69
RAPGEF1-202ENST00000372190 SHISA2Q6UWI4 295 aa10.73□□□□□ -0.69
RAPGEF1-202ENST00000372190 NOP10Q9NPE3 64 aaKnown RBP10.73□□□□□ -0.69
RAPGEF1-202ENST00000372190 PLA2G2EQ9NZK7 142 aa10.73□□□□□ -0.69
RAPGEF1-202ENST00000372190 TTC28Q96AY4 2481 aa10.73□□□□□ -0.69
RAPGEF1-202ENST00000372190 Q8N976 141 aa10.72□□□□□ -0.69
RAPGEF1-202ENST00000372190 IGLV10-54A0A075B6I4 117 aa10.72□□□□□ -0.69
RAPGEF1-202ENST00000372190 C2orf70A6NJV1 201 aa10.72□□□□□ -0.69
RAPGEF1-202ENST00000372190 C9orf85Q96MD7 179 aa10.72□□□□□ -0.69
RAPGEF1-202ENST00000372190 LOC107984640A0A0U1RRK4 108 aa10.72□□□□□ -0.69
RAPGEF1-202ENST00000372190 CRYGDP07320 174 aa10.72□□□□□ -0.69
RAPGEF1-202ENST00000372190 NRACQ8N912 160 aa10.72□□□□□ -0.69
RAPGEF1-202ENST00000372190 MDFICQ9P1T7 246 aa10.72□□□□□ -0.69
RAPGEF1-202ENST00000372190 TRIAP1O43715 76 aa10.72□□□□□ -0.69
RAPGEF1-202ENST00000372190 APRG1Q8IVJ8 170 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms