RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 TPPP3Q9BW30 176 aa10.52□□□□□ -0.73
RPF1-202ENST00000370656 S100A4P26447 101 aaKnown RBP10.51□□□□□ -0.73
RPF1-202ENST00000370656 RAB4BP61018 213 aa10.51□□□□□ -0.73
RPF1-202ENST00000370656 Q0VG73 95 aa10.51□□□□□ -0.73
RPF1-202ENST00000370656 TWIST1Q15672 202 aa10.51□□□□□ -0.73
RPF1-202ENST00000370656 TTC32Q5I0X7 151 aa10.51□□□□□ -0.73
RPF1-202ENST00000370656 MSRB1Q9NZV6 116 aa10.51□□□□□ -0.73
RPF1-202ENST00000370656 LINC00588Q9Y4M8 146 aa10.51□□□□□ -0.73
RPF1-202ENST00000370656 ALKBH7Q9BT30 221 aaPredicted RBP10.5□□□□□ -0.73
RPF1-202ENST00000370656 MDFICQ9P1T7 246 aa10.5□□□□□ -0.73
RPF1-202ENST00000370656 CBY3A6NI87 242 aa10.49□□□□□ -0.73
RPF1-202ENST00000370656 HOXA5P20719 270 aa10.49□□□□□ -0.73
RPF1-202ENST00000370656 SPANXN1Q5VSR9 72 aa10.49□□□□□ -0.73
RPF1-202ENST00000370656 Q9H8V8 135 aa10.49□□□□□ -0.73
RPF1-202ENST00000370656 PHLDA3Q9Y5J5 127 aa10.49□□□□□ -0.73
RPF1-202ENST00000370656 MUC21A0A0G2JKD1 596 aa10.48□□□□□ -0.73
RPF1-202ENST00000370656 MUC21A0A140T8X8 626 aa10.48□□□□□ -0.73
RPF1-202ENST00000370656 LOC105371267A0A1B0GV96 52 aa10.48□□□□□ -0.73
RPF1-202ENST00000370656 EPM2AB3EWF7 344 aa10.48□□□□□ -0.73
RPF1-202ENST00000370656 RAB4AP20338 218 aa10.48□□□□□ -0.73
RPF1-202ENST00000370656 OR10J3Q5JRS4 329 aa10.48□□□□□ -0.73
RPF1-202ENST00000370656 C11orf72Q8NBR9 251 aa10.48□□□□□ -0.73
RPF1-202ENST00000370656 RNF185Q96GF1 192 aa10.48□□□□□ -0.73
RPF1-202ENST00000370656 LINC01587Q99440 93 aa10.48□□□□□ -0.73
RPF1-202ENST00000370656 SPXQ9BT56 116 aa10.48□□□□□ -0.73
RPF1-202ENST00000370656 KIAA1644Q3SXP7 199 aa10.47□□□□□ -0.73
RPF1-202ENST00000370656 KIF25-AS1Q9Y6Z4 181 aa10.47□□□□□ -0.73
RPF1-202ENST00000370656 PPBPP02775 128 aa10.46□□□□□ -0.73
RPF1-202ENST00000370656 PRM2P04554 102 aa10.46□□□□□ -0.73
RPF1-202ENST00000370656 S100A6P06703 90 aa10.46□□□□□ -0.73
RPF1-202ENST00000370656 ESDP10768 282 aa10.46□□□□□ -0.73
RPF1-202ENST00000370656 BTF3P20290 206 aaKnown RBP10.46□□□□□ -0.73
RPF1-202ENST00000370656 LINC00315P59091 139 aa10.46□□□□□ -0.73
RPF1-202ENST00000370656 SNRPEP62304 92 aaKnown RBP10.46□□□□□ -0.73
RPF1-202ENST00000370656 MRPL51Q4U2R6 128 aaKnown RBP10.46□□□□□ -0.73
RPF1-202ENST00000370656 SMIM15Q7Z3B0 74 aa10.46□□□□□ -0.73
RPF1-202ENST00000370656 AMN1Q8IY45 258 aa10.46□□□□□ -0.73
RPF1-202ENST00000370656 EVI2AP22794 236 aa10.45□□□□□ -0.74
RPF1-202ENST00000370656 SRIP30626 198 aa10.45□□□□□ -0.74
RPF1-202ENST00000370656 NDUFA6P56556 154 aa10.45□□□□□ -0.74
RPF1-202ENST00000370656 ZNF415Q09FC8 603 aa10.45□□□□□ -0.74
RPF1-202ENST00000370656 C18orf32Q8TCD1 76 aa10.45□□□□□ -0.74
RPF1-202ENST00000370656 RNASE8Q8TDE3 154 aaKnown RBP10.45□□□□□ -0.74
RPF1-202ENST00000370656 C16orf74Q96GX8 76 aa10.45□□□□□ -0.74
RPF1-202ENST00000370656 GSN-AS1Q9NRJ2 163 aa10.45□□□□□ -0.74
RPF1-202ENST00000370656 TIMM8BQ9Y5J9 83 aaPredicted RBP10.45□□□□□ -0.74
RPF1-202ENST00000370656 M0R2P5 195 aa10.44□□□□□ -0.74
RPF1-202ENST00000370656 KRTAP10-2P60368 255 aa10.44□□□□□ -0.74
RPF1-202ENST00000370656 SYT8Q8NBV8 401 aa10.44□□□□□ -0.74
RPF1-202ENST00000370656 AP1S3Q96PC3 154 aa10.44□□□□□ -0.74
RPF1-202ENST00000370656 DPH3P1Q9H4G8 78 aa10.44□□□□□ -0.74
RPF1-202ENST00000370656 LAMTOR2Q9Y2Q5 125 aa10.44□□□□□ -0.74
RPF1-202ENST00000370656 PLAC8L1A1L4L8 177 aa10.43□□□□□ -0.74
RPF1-202ENST00000370656 PRSS47A8MTI9 375 aa10.43□□□□□ -0.74
RPF1-202ENST00000370656 M0R381 172 aa10.43□□□□□ -0.74
RPF1-202ENST00000370656 INAFM2P0DMQ5 153 aa10.43□□□□□ -0.74
RPF1-202ENST00000370656 AZU1P20160 251 aa10.43□□□□□ -0.74
RPF1-202ENST00000370656 LINC00310P59036 64 aa10.43□□□□□ -0.74
RPF1-202ENST00000370656 TMEM263Q8WUH6 116 aaKnown RBP10.43□□□□□ -0.74
RPF1-202ENST00000370656 RASL10AQ92737 203 aa10.43□□□□□ -0.74
RPF1-202ENST00000370656 CRYGDP07320 174 aa10.42□□□□□ -0.74
RPF1-202ENST00000370656 HTN1P15515 57 aa10.42□□□□□ -0.74
RPF1-202ENST00000370656 SSTP61278 116 aa10.42□□□□□ -0.74
RPF1-202ENST00000370656 DAZ2Q13117 558 aaKnown RBP10.42□□□□□ -0.74
RPF1-202ENST00000370656 ORMDL3Q8N138 153 aa10.42□□□□□ -0.74
RPF1-202ENST00000370656 HIST3H2BBQ8N257 126 aa10.42□□□□□ -0.74
RPF1-202ENST00000370656 MRAP2Q96G30 205 aa10.42□□□□□ -0.74
RPF1-202ENST00000370656 D6R8Y8 96 aa10.41□□□□□ -0.74
RPF1-202ENST00000370656 ZNF876PQ49A33 203 aa10.41□□□□□ -0.74
RPF1-202ENST00000370656 PACRGQ96M98 296 aaPredicted RBP10.41□□□□□ -0.74
RPF1-202ENST00000370656 UPK3BQ9BT76 320 aa10.41□□□□□ -0.74
RPF1-202ENST00000370656 KRTAP1-5Q9BYS1 174 aa10.41□□□□□ -0.74
RPF1-202ENST00000370656 PGPEP1Q9NXJ5 209 aa10.41□□□□□ -0.74
RPF1-202ENST00000370656 TRAV26-1A0A087WT03 109 aa10.4□□□□□ -0.74
RPF1-202ENST00000370656 EREGO14944 169 aa10.4□□□□□ -0.74
RPF1-202ENST00000370656 CKS2P33552 79 aa10.4□□□□□ -0.74
RPF1-202ENST00000370656 UFSP1Q6NVU6 142 aa10.4□□□□□ -0.74
RPF1-202ENST00000370656 C14orf178Q8N769 122 aaPredicted RBP10.4□□□□□ -0.74
RPF1-202ENST00000370656 PRELID3AQ96N28 172 aa10.4□□□□□ -0.74
RPF1-202ENST00000370656 NOP10Q9NPE3 64 aaKnown RBP10.4□□□□□ -0.74
RPF1-202ENST00000370656 IFITM10A6NMD0 228 aa10.39□□□□□ -0.75
RPF1-202ENST00000370656 A8MWV9 139 aa10.39□□□□□ -0.75
RPF1-202ENST00000370656 BAGE3Q86Y29 109 aa10.39□□□□□ -0.75
RPF1-202ENST00000370656 NRACQ8N912 160 aa10.39□□□□□ -0.75
RPF1-202ENST00000370656 URB1-AS1Q96HZ7 61 aa10.39□□□□□ -0.75
RPF1-202ENST00000370656 JPT2Q9H910 190 aa10.39□□□□□ -0.75
RPF1-202ENST00000370656 MRPS16Q9Y3D3 137 aaKnown RBP10.39□□□□□ -0.75
RPF1-202ENST00000370656 LINC01546A6NGU7 62 aa10.38□□□□□ -0.75
RPF1-202ENST00000370656 H3BNG1 76 aa10.38□□□□□ -0.75
RPF1-202ENST00000370656 RS1O15537 224 aa10.38□□□□□ -0.75
RPF1-202ENST00000370656 NUPR1O60356 82 aa10.38□□□□□ -0.75
RPF1-202ENST00000370656 SERF1AO75920 110 aa10.38□□□□□ -0.75
RPF1-202ENST00000370656 SRRM2Q9UQ35 2752 aaKnown RBP10.37□□□□□ -0.75
RPF1-202ENST00000370656 A0A0J9YY99 117 aa10.37□□□□□ -0.75
RPF1-202ENST00000370656 TNFRSF6BO95407 300 aa10.37□□□□□ -0.75
RPF1-202ENST00000370656 PPP1R17O96001 155 aa10.37□□□□□ -0.75
RPF1-202ENST00000370656 NPYP01303 97 aa10.37□□□□□ -0.75
RPF1-202ENST00000370656 SMIM17P0DL12 118 aa10.37□□□□□ -0.75
RPF1-202ENST00000370656 RPL32P62910 135 aaKnown RBP10.37□□□□□ -0.75
RPF1-202ENST00000370656 IQCJQ1A5X6 159 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms