RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 MGPP08493 103 aa10.79□□□□□ -0.68
PRPF38B-202ENST00000370022 NEGR1Q7Z3B1 354 aa10.79□□□□□ -0.68
PRPF38B-202ENST00000370022 ATP5L2Q7Z4Y8 100 aa10.79□□□□□ -0.68
PRPF38B-202ENST00000370022 LINC00476Q8WZB0 136 aa10.79□□□□□ -0.68
PRPF38B-202ENST00000370022 TMEM191AQ9H0A3 160 aa10.79□□□□□ -0.68
PRPF38B-202ENST00000370022 C7orf77A4D0Y5 90 aa10.78□□□□□ -0.68
PRPF38B-202ENST00000370022 TCAPO15273 167 aa10.78□□□□□ -0.68
PRPF38B-202ENST00000370022 CCL18P55774 89 aa10.78□□□□□ -0.68
PRPF38B-202ENST00000370022 FRZBQ92765 325 aa10.78□□□□□ -0.68
PRPF38B-202ENST00000370022 LOC100131303A0A0U1RQF7 123 aa10.77□□□□□ -0.68
PRPF38B-202ENST00000370022 KCNIP4Q6PIL6 250 aa10.77□□□□□ -0.68
PRPF38B-202ENST00000370022 LCE6AA0A183 80 aa10.77□□□□□ -0.69
PRPF38B-202ENST00000370022 FAM3BP58499 235 aaPredicted RBP10.77□□□□□ -0.69
PRPF38B-202ENST00000370022 HBBP68871 147 aa10.77□□□□□ -0.69
PRPF38B-202ENST00000370022 RPL36AP83881 106 aaKnown RBP10.77□□□□□ -0.69
PRPF38B-202ENST00000370022 RPL36ALQ969Q0 106 aaKnown RBP10.77□□□□□ -0.69
PRPF38B-202ENST00000370022 BTF3L4Q96K17 158 aa10.77□□□□□ -0.69
PRPF38B-202ENST00000370022 SMCO4Q9NRQ5 59 aa10.77□□□□□ -0.69
PRPF38B-202ENST00000370022 PLECQ15149 4684 aaKnown RBP10.76□□□□□ -0.69
PRPF38B-202ENST00000370022 COLCA2A8K830 154 aa10.76□□□□□ -0.69
PRPF38B-202ENST00000370022 LY6G6CO95867 125 aa10.76□□□□□ -0.69
PRPF38B-202ENST00000370022 SUMO4Q6EEV6 95 aa10.76□□□□□ -0.69
PRPF38B-202ENST00000370022 UBE2DNLQ8IWF7 75 aa10.76□□□□□ -0.69
PRPF38B-202ENST00000370022 RPS10P5Q9NQ39 176 aa10.76□□□□□ -0.69
PRPF38B-202ENST00000370022 TRBV7-3A0A075B6L6 115 aa10.75□□□□□ -0.69
PRPF38B-202ENST00000370022 TRAV9-1A0A075B6T8 112 aa10.75□□□□□ -0.69
PRPF38B-202ENST00000370022 A0A1B0GXF2 115 aa10.75□□□□□ -0.69
PRPF38B-202ENST00000370022 GAGE12JA6NER3 117 aa10.75□□□□□ -0.69
PRPF38B-202ENST00000370022 M0QY20 66 aa10.75□□□□□ -0.69
PRPF38B-202ENST00000370022 LINC00694P0DN24 101 aa10.75□□□□□ -0.69
PRPF38B-202ENST00000370022 CAMPP49913 170 aa10.75□□□□□ -0.69
PRPF38B-202ENST00000370022 PKIAP61925 76 aa10.75□□□□□ -0.69
PRPF38B-202ENST00000370022 FABP9Q0Z7S8 132 aa10.75□□□□□ -0.69
PRPF38B-202ENST00000370022 GAGE1Q13065 139 aa10.75□□□□□ -0.69
PRPF38B-202ENST00000370022 GAGE4Q13068 117 aa10.75□□□□□ -0.69
PRPF38B-202ENST00000370022 GAGE5Q13069 117 aa10.75□□□□□ -0.69
PRPF38B-202ENST00000370022 ESRGQ1W209 222 aa10.75□□□□□ -0.69
PRPF38B-202ENST00000370022 GAGE13Q4V321 117 aa10.75□□□□□ -0.69
PRPF38B-202ENST00000370022 MRPL54Q6P161 138 aaKnown RBP10.75□□□□□ -0.69
PRPF38B-202ENST00000370022 DNAJC30Q96LL9 226 aa10.75□□□□□ -0.69
PRPF38B-202ENST00000370022 TIRAPP58753 221 aa10.74□□□□□ -0.69
PRPF38B-202ENST00000370022 RASL11AQ6T310 242 aa10.74□□□□□ -0.69
PRPF38B-202ENST00000370022 LYPD5Q6UWN5 251 aa10.74□□□□□ -0.69
PRPF38B-202ENST00000370022 CBLN2Q8IUK8 224 aa10.74□□□□□ -0.69
PRPF38B-202ENST00000370022 ATP6V0E2Q8NHE4 81 aa10.74□□□□□ -0.69
PRPF38B-202ENST00000370022 TENM2Q9NT68 2774 aa10.74□□□□□ -0.69
PRPF38B-202ENST00000370022 TSTD3H0UI37 97 aa10.73□□□□□ -0.69
PRPF38B-202ENST00000370022 GATD1Q8NB37 220 aa10.73□□□□□ -0.69
PRPF38B-202ENST00000370022 NEXN-AS1Q8NBZ9 246 aa10.73□□□□□ -0.69
PRPF38B-202ENST00000370022 ZNRF2Q8NHG8 242 aa10.73□□□□□ -0.69
PRPF38B-202ENST00000370022 Q9UF83 564 aa10.73□□□□□ -0.69
PRPF38B-202ENST00000370022 LINC00588Q9Y4M8 146 aa10.73□□□□□ -0.69
PRPF38B-202ENST00000370022 MRAP2Q96G30 205 aa10.73□□□□□ -0.69
PRPF38B-202ENST00000370022 UPK3BQ9BT76 320 aa10.73□□□□□ -0.69
PRPF38B-202ENST00000370022 MRPS16Q9Y3D3 137 aaKnown RBP10.73□□□□□ -0.69
PRPF38B-202ENST00000370022 TNFRSF18Q9Y5U5 241 aa10.73□□□□□ -0.69
PRPF38B-202ENST00000370022 LINC00614P0C842 121 aa10.72□□□□□ -0.69
PRPF38B-202ENST00000370022 DDTP30046 118 aa10.72□□□□□ -0.69
PRPF38B-202ENST00000370022 UBE2D3P61077 147 aa10.72□□□□□ -0.69
PRPF38B-202ENST00000370022 UBE2D2P62837 147 aa10.72□□□□□ -0.69
PRPF38B-202ENST00000370022 AMN1Q8IY45 258 aa10.72□□□□□ -0.69
PRPF38B-202ENST00000370022 RNF185Q96GF1 192 aa10.72□□□□□ -0.69
PRPF38B-202ENST00000370022 GTSF1LQ9H1H1 148 aa10.72□□□□□ -0.69
PRPF38B-202ENST00000370022 FAM104BQ5XKR9 115 aa10.71□□□□□ -0.69
PRPF38B-202ENST00000370022 TRAV26-2A0A0B4J265 109 aa10.7□□□□□ -0.7
PRPF38B-202ENST00000370022 C21orf62-AS1Q17RA5 79 aa10.7□□□□□ -0.7
PRPF38B-202ENST00000370022 DAZ4Q86SG3 579 aaKnown RBP10.7□□□□□ -0.7
PRPF38B-202ENST00000370022 DAZ3Q9NR90 486 aaKnown RBP10.7□□□□□ -0.7
PRPF38B-202ENST00000370022 PPP1R17O96001 155 aa10.69□□□□□ -0.7
PRPF38B-202ENST00000370022 S100A2P29034 98 aa10.69□□□□□ -0.7
PRPF38B-202ENST00000370022 CHTOPQ9Y3Y2 248 aaKnown RBP10.69□□□□□ -0.7
PRPF38B-202ENST00000370022 URGCP-MRPS24S4R325 110 aa10.69□□□□□ -0.7
PRPF38B-202ENST00000370022 TMEM97Q5BJF2 176 aa10.69□□□□□ -0.7
PRPF38B-202ENST00000370022 LELP1Q5T871 98 aa10.69□□□□□ -0.7
PRPF38B-202ENST00000370022 TRAV8-6A0A0B4J262 113 aa10.67□□□□□ -0.7
PRPF38B-202ENST00000370022 TRBV6-5A0A0K0K1A5 114 aa10.67□□□□□ -0.7
PRPF38B-202ENST00000370022 PPBPP02775 128 aa10.67□□□□□ -0.7
PRPF38B-202ENST00000370022 COX19Q49B96 90 aa10.67□□□□□ -0.7
PRPF38B-202ENST00000370022 MRPL51Q4U2R6 128 aaKnown RBP10.67□□□□□ -0.7
PRPF38B-202ENST00000370022 OR10J3Q5JRS4 329 aa10.67□□□□□ -0.7
PRPF38B-202ENST00000370022 MRPL52Q86TS9 123 aaKnown RBP10.67□□□□□ -0.7
PRPF38B-202ENST00000370022 Q9H8V8 135 aa10.67□□□□□ -0.7
PRPF38B-202ENST00000370022 ALMS1Q8TCU4 4167 aa10.67□□□□□ -0.7
PRPF38B-202ENST00000370022 CKS2P33552 79 aa10.66□□□□□ -0.7
PRPF38B-202ENST00000370022 RPL39LQ96EH5 51 aaKnown RBP10.66□□□□□ -0.7
PRPF38B-202ENST00000370022 LYSTQ99698 3801 aa10.66□□□□□ -0.7
PRPF38B-202ENST00000370022 PYY3Q5JQD4 70 aa10.65□□□□□ -0.7
PRPF38B-202ENST00000370022 SIVA1O15304 175 aa10.65□□□□□ -0.71
PRPF38B-202ENST00000370022 GNB1LQ9BYB4 327 aa10.65□□□□□ -0.71
PRPF38B-202ENST00000370022 ST20Q9HBF5 79 aa10.65□□□□□ -0.71
PRPF38B-202ENST00000370022 TRBV6-8A0A0A6YYG3 113 aa10.64□□□□□ -0.71
PRPF38B-202ENST00000370022 IGHV3-38A0A0C4DH36 116 aa10.64□□□□□ -0.71
PRPF38B-202ENST00000370022 NCR2O95944 276 aa10.64□□□□□ -0.71
PRPF38B-202ENST00000370022 HLA-DQA1P01909 254 aa10.64□□□□□ -0.71
PRPF38B-202ENST00000370022 ELOBQ15370 118 aa10.64□□□□□ -0.71
PRPF38B-202ENST00000370022 TMEM136Q6ZRR5 245 aa10.64□□□□□ -0.71
PRPF38B-202ENST00000370022 ORMDL3Q8N138 153 aa10.64□□□□□ -0.71
PRPF38B-202ENST00000370022 RYR2Q92736 4967 aa10.63□□□□□ -0.71
PRPF38B-202ENST00000370022 TRBV24-1A0A075B6N3 115 aa10.63□□□□□ -0.71
PRPF38B-202ENST00000370022 SDHAF1A6NFY7 115 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms