RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 ATP6V0E2Q8NHE4 81 aa7.87□□□□□ -1.15
PRPF38B-201ENST00000370021 NDUFA12Q9UI09 145 aa7.87□□□□□ -1.15
PRPF38B-201ENST00000370021 ELANEP08246 267 aa7.87□□□□□ -1.15
PRPF38B-201ENST00000370021 UBE2D1P51668 147 aa7.87□□□□□ -1.15
PRPF38B-201ENST00000370021 UBE2E1P51965 193 aa7.87□□□□□ -1.15
PRPF38B-201ENST00000370021 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.87□□□□□ -1.15
PRPF38B-201ENST00000370021 LY6LH3BQJ8 138 aa7.87□□□□□ -1.15
PRPF38B-201ENST00000370021 ID1P41134 155 aa7.87□□□□□ -1.15
PRPF38B-201ENST00000370021 SLC25A29Q8N8R3 303 aa7.87□□□□□ -1.15
PRPF38B-201ENST00000370021 TOMM7Q9P0U1 55 aa7.87□□□□□ -1.15
PRPF38B-201ENST00000370021 CUBNO60494 3623 aa7.86□□□□□ -1.15
PRPF38B-201ENST00000370021 ZFAND3Q9H8U3 227 aa7.86□□□□□ -1.15
PRPF38B-201ENST00000370021 EDA2RQ9HAV5 297 aa7.86□□□□□ -1.15
PRPF38B-201ENST00000370021 CNFNQ9BYD5 112 aa7.86□□□□□ -1.15
PRPF38B-201ENST00000370021 IGHV3-33P01772 117 aa7.86□□□□□ -1.15
PRPF38B-201ENST00000370021 BPESC1Q9GZL8 116 aa7.86□□□□□ -1.15
PRPF38B-201ENST00000370021 TRBV7-1A0A0A6YYK4 115 aa7.85□□□□□ -1.15
PRPF38B-201ENST00000370021 FAM236AA0A1B0GUQ0 79 aa7.85□□□□□ -1.15
PRPF38B-201ENST00000370021 FAM236BA0A1B0GV22 79 aa7.85□□□□□ -1.15
PRPF38B-201ENST00000370021 TNFRSF13BO14836 293 aaPredicted RBP7.85□□□□□ -1.15
PRPF38B-201ENST00000370021 TRIAP1O43715 76 aa7.85□□□□□ -1.15
PRPF38B-201ENST00000370021 HOXD3P31249 432 aaPredicted RBP7.85□□□□□ -1.15
PRPF38B-201ENST00000370021 C9orf153Q5TBE3 101 aa7.85□□□□□ -1.15
PRPF38B-201ENST00000370021 SVIPQ8NHG7 77 aa7.85□□□□□ -1.15
PRPF38B-201ENST00000370021 CITED1Q99966 193 aa7.85□□□□□ -1.15
PRPF38B-201ENST00000370021 EDN2P20800 178 aa7.85□□□□□ -1.15
PRPF38B-201ENST00000370021 C9orf47Q6ZRZ4 202 aa7.85□□□□□ -1.15
PRPF38B-201ENST00000370021 ZFAND2AQ8N6M9 145 aa7.85□□□□□ -1.15
PRPF38B-201ENST00000370021 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.85□□□□□ -1.15
PRPF38B-201ENST00000370021 IGKV2-29A2NJV5 120 aaPredicted RBP7.85□□□□□ -1.15
PRPF38B-201ENST00000370021 ABCA2Q9BZC7 2435 aa7.84□□□□□ -1.15
PRPF38B-201ENST00000370021 BSNQ9UPA5 3926 aa7.84□□□□□ -1.15
PRPF38B-201ENST00000370021 TRAV13-1A0A0B4J241 112 aa7.84□□□□□ -1.15
PRPF38B-201ENST00000370021 CRYGDP07320 174 aa7.84□□□□□ -1.15
PRPF38B-201ENST00000370021 UBE2D3P61077 147 aa7.84□□□□□ -1.15
PRPF38B-201ENST00000370021 UBE2D2P62837 147 aa7.84□□□□□ -1.15
PRPF38B-201ENST00000370021 RPL32P62910 135 aaKnown RBP7.84□□□□□ -1.15
PRPF38B-201ENST00000370021 GAGE2AQ6NT46 116 aa7.84□□□□□ -1.15
PRPF38B-201ENST00000370021 H3BUX3 64 aa7.84□□□□□ -1.15
PRPF38B-201ENST00000370021 BLCAPP62952 87 aa7.84□□□□□ -1.15
PRPF38B-201ENST00000370021 M0R1W7 72 aa7.83□□□□□ -1.16
PRPF38B-201ENST00000370021 PROK1P58294 105 aa7.83□□□□□ -1.16
PRPF38B-201ENST00000370021 CIRBPQ14011 172 aaKnown RBP7.83□□□□□ -1.16
PRPF38B-201ENST00000370021 MINOS1Q5TGZ0 78 aa7.83□□□□□ -1.16
PRPF38B-201ENST00000370021 TRGV11A0A075B6L2 103 aa7.83□□□□□ -1.16
PRPF38B-201ENST00000370021 RNASE3P12724 160 aaKnown RBP7.83□□□□□ -1.16
PRPF38B-201ENST00000370021 TMEM141Q96I45 108 aa7.83□□□□□ -1.16
PRPF38B-201ENST00000370021 IGLV4-69A0A075B6H9 119 aa7.82□□□□□ -1.16
PRPF38B-201ENST00000370021 NPFFO15130 113 aa7.82□□□□□ -1.16
PRPF38B-201ENST00000370021 TSHBP01222 138 aa7.82□□□□□ -1.16
PRPF38B-201ENST00000370021 IGHV3-30-3P0DP02 117 aa7.82□□□□□ -1.16
PRPF38B-201ENST00000370021 ZNF22P17026 224 aaPredicted RBP7.82□□□□□ -1.16
PRPF38B-201ENST00000370021 ZNF575Q86XF7 245 aa7.82□□□□□ -1.16
PRPF38B-201ENST00000370021 ICOSQ9Y6W8 199 aa7.82□□□□□ -1.16
PRPF38B-201ENST00000370021 RHODO00212 210 aa7.82□□□□□ -1.16
PRPF38B-201ENST00000370021 IGHV3-53P01767 116 aa7.82□□□□□ -1.16
PRPF38B-201ENST00000370021 OR13C6PQ8NH95 151 aa7.82□□□□□ -1.16
PRPF38B-201ENST00000370021 IGFL3Q6UXB1 125 aa7.82□□□□□ -1.16
PRPF38B-201ENST00000370021 SNRPD3P62318 126 aaKnown RBP7.81□□□□□ -1.16
PRPF38B-201ENST00000370021 NAV2Q8IVL1 2488 aa7.81□□□□□ -1.16
PRPF38B-201ENST00000370021 A0A0J9YXY3 114 aa7.81□□□□□ -1.16
PRPF38B-201ENST00000370021 LY6G5BQ8NDX9 201 aa7.81□□□□□ -1.16
PRPF38B-201ENST00000370021 MINOS1-NBL1R4GNA1 71 aa7.81□□□□□ -1.16
PRPF38B-201ENST00000370021 TRBV10-2A0A0K0K1G8 114 aa7.81□□□□□ -1.16
PRPF38B-201ENST00000370021 LEPROTO15243 131 aa7.81□□□□□ -1.16
PRPF38B-201ENST00000370021 TMEM101Q96IK0 257 aa7.8□□□□□ -1.16
PRPF38B-201ENST00000370021 C11orf68Q9H3H3 251 aaKnown RBP7.8□□□□□ -1.16
PRPF38B-201ENST00000370021 PKD1L2Q7Z442 2459 aa7.8□□□□□ -1.16
PRPF38B-201ENST00000370021 DCHS2Q6V1P9 2916 aa7.8□□□□□ -1.16
PRPF38B-201ENST00000370021 CENPVL3A0A0U1RRI6 287 aa7.8□□□□□ -1.16
PRPF38B-201ENST00000370021 I3L3M4 83 aa7.8□□□□□ -1.16
PRPF38B-201ENST00000370021 CDSNQ15517 529 aa7.8□□□□□ -1.16
PRPF38B-201ENST00000370021 HIST2H2BDQ6DRA6 164 aa7.8□□□□□ -1.16
PRPF38B-201ENST00000370021 GPHB5Q86YW7 130 aa7.8□□□□□ -1.16
PRPF38B-201ENST00000370021 IGIPA6NJ69 53 aa7.79□□□□□ -1.16
PRPF38B-201ENST00000370021 SRSF2Q01130 221 aaKnown RBP7.79□□□□□ -1.16
PRPF38B-201ENST00000370021 TMEM190Q8WZ59 177 aa7.79□□□□□ -1.16
PRPF38B-201ENST00000370021 PIEZO1Q92508 2521 aa7.79□□□□□ -1.16
PRPF38B-201ENST00000370021 MYO18BQ8IUG5 2567 aa7.79□□□□□ -1.16
PRPF38B-201ENST00000370021 COX6B1P14854 86 aa7.79□□□□□ -1.16
PRPF38B-201ENST00000370021 MUC4Q99102 2169 aa7.79□□□□□ -1.16
PRPF38B-201ENST00000370021 DNAL4O96015 105 aa7.79□□□□□ -1.16
PRPF38B-201ENST00000370021 PRIMA1Q86XR5 153 aa7.79□□□□□ -1.16
PRPF38B-201ENST00000370021 Q9HAA7 133 aa7.79□□□□□ -1.16
PRPF38B-201ENST00000370021 DAZ1Q9NQZ3 744 aaKnown RBP7.79□□□□□ -1.16
PRPF38B-201ENST00000370021 MOB4Q9Y3A3 225 aa7.79□□□□□ -1.16
PRPF38B-201ENST00000370021 IGHV1-69DA0A0B4J2H0 117 aa7.78□□□□□ -1.16
PRPF38B-201ENST00000370021 Q8NA96 180 aa7.78□□□□□ -1.16
PRPF38B-201ENST00000370021 TMEM263Q8WUH6 116 aaKnown RBP7.78□□□□□ -1.16
PRPF38B-201ENST00000370021 LINC01587Q99440 93 aa7.78□□□□□ -1.16
PRPF38B-201ENST00000370021 KLK5Q9Y337 293 aaPredicted RBP7.78□□□□□ -1.16
PRPF38B-201ENST00000370021 NXPH4O95158 308 aa7.78□□□□□ -1.16
PRPF38B-201ENST00000370021 ADAMTSL4-AS1Q5T5F5 129 aa7.78□□□□□ -1.16
PRPF38B-201ENST00000370021 NOTCH2Q04721 2471 aa7.78□□□□□ -1.16
PRPF38B-201ENST00000370021 LGALS9O00182 355 aa7.78□□□□□ -1.16
PRPF38B-201ENST00000370021 NHLRC4P0CG21 123 aaPredicted RBP7.78□□□□□ -1.16
PRPF38B-201ENST00000370021 C11orf44Q8N8P7 122 aa7.78□□□□□ -1.16
PRPF38B-201ENST00000370021 ITLN2Q8WWU7 325 aaPredicted RBP7.78□□□□□ -1.16
PRPF38B-201ENST00000370021 IGKV3D-7A0A0C4DH55 119 aa7.77□□□□□ -1.17
PRPF38B-201ENST00000370021 HIST1H4AP62805 103 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms