RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 J3QR89 54 aa-0.07□□□□□ -2.42
ECHDC1-201ENST00000368287 UBE2D1P51668 147 aa-0.07□□□□□ -2.42
ECHDC1-201ENST00000368287 EDDM3BP56851 147 aa-0.07□□□□□ -2.42
ECHDC1-201ENST00000368287 SMIM21Q3B7S5 101 aa-0.07□□□□□ -2.42
ECHDC1-201ENST00000368287 ANP32BQ92688 251 aaKnown RBP-0.07□□□□□ -2.42
ECHDC1-201ENST00000368287 FHAD1B1AJZ9 1412 aa-0.07□□□□□ -2.42
ECHDC1-201ENST00000368287 IBTKQ9P2D0 1353 aaPredicted RBP-0.07□□□□□ -2.42
ECHDC1-201ENST00000368287 NCR2O95944 276 aa-0.08□□□□□ -2.42
ECHDC1-201ENST00000368287 RRAS2P62070 204 aaPredicted RBP-0.08□□□□□ -2.42
ECHDC1-201ENST00000368287 S100A7L2Q5SY68 101 aa-0.08□□□□□ -2.42
ECHDC1-201ENST00000368287 RPRMQ9NS64 109 aa-0.08□□□□□ -2.42
ECHDC1-201ENST00000368287 SPEF2Q9C093 1822 aa-0.08□□□□□ -2.42
ECHDC1-201ENST00000368287 WNK2Q9Y3S1 2297 aa-0.08□□□□□ -2.42
ECHDC1-201ENST00000368287 TMEM14DPA8MWL7 114 aa-0.09□□□□□ -2.42
ECHDC1-201ENST00000368287 IL5P05113 134 aa-0.09□□□□□ -2.42
ECHDC1-201ENST00000368287 INSL4Q14641 139 aa-0.09□□□□□ -2.42
ECHDC1-201ENST00000368287 PSMG3Q9BT73 122 aaPredicted RBP-0.09□□□□□ -2.42
ECHDC1-201ENST00000368287 COPZ2Q9P299 210 aa-0.09□□□□□ -2.42
ECHDC1-201ENST00000368287 G3V318 75 aa-0.1□□□□□ -2.43
ECHDC1-201ENST00000368287 GCHFRP30047 84 aa-0.1□□□□□ -2.43
ECHDC1-201ENST00000368287 RPS25P62851 125 aaKnown RBP-0.1□□□□□ -2.43
ECHDC1-201ENST00000368287 RPL7L1Q6DKI1 246 aaKnown RBP-0.1□□□□□ -2.43
ECHDC1-201ENST00000368287 SPTSSBQ8NFR3 76 aa-0.1□□□□□ -2.43
ECHDC1-201ENST00000368287 SDF2Q99470 211 aa-0.1□□□□□ -2.43
ECHDC1-201ENST00000368287 TPT1P8Q9HAU6 139 aa-0.1□□□□□ -2.43
ECHDC1-201ENST00000368287 ZMYM4Q5VZL5 1548 aa-0.1□□□□□ -2.43
ECHDC1-201ENST00000368287 TMEM2Q9UHN6 1383 aa-0.1□□□□□ -2.43
ECHDC1-201ENST00000368287 FAM213BQ8TBF2 198 aa-0.11□□□□□ -2.43
ECHDC1-201ENST00000368287 WFDC6Q9BQY6 131 aa-0.11□□□□□ -2.43
ECHDC1-201ENST00000368287 MYH8P13535 1937 aa-0.11□□□□□ -2.43
ECHDC1-201ENST00000368287 MYH9P35579 1960 aaKnown RBP-0.12□□□□□ -2.43
ECHDC1-201ENST00000368287 IFT172Q9UG01 1749 aa-0.12□□□□□ -2.43
ECHDC1-201ENST00000368287 TRAV1-2A0A0B4J238 106 aa-0.12□□□□□ -2.43
ECHDC1-201ENST00000368287 A6NIN4 97 aa-0.12□□□□□ -2.43
ECHDC1-201ENST00000368287 COPZ1P61923 177 aa-0.12□□□□□ -2.43
ECHDC1-201ENST00000368287 SSBP3-AS1Q7Z2R9 100 aa-0.12□□□□□ -2.43
ECHDC1-201ENST00000368287 SPTSSAQ969W0 71 aa-0.12□□□□□ -2.43
ECHDC1-201ENST00000368287 ZNF292O60281 2723 aa-0.12□□□□□ -2.43
ECHDC1-201ENST00000368287 U3KQA8 63 aa-0.13□□□□□ -2.43
ECHDC1-201ENST00000368287 ZNF815PA8K554 130 aa-0.14□□□□□ -2.43
ECHDC1-201ENST00000368287 SNCGO76070 127 aa-0.14□□□□□ -2.43
ECHDC1-201ENST00000368287 PIPP12273 146 aaPredicted RBP-0.14□□□□□ -2.43
ECHDC1-201ENST00000368287 CBLN1P23435 193 aa-0.14□□□□□ -2.43
ECHDC1-201ENST00000368287 SPTBN2O15020 2390 aa-0.14□□□□□ -2.43
ECHDC1-201ENST00000368287 NDUFB6O95139 128 aa-0.15□□□□□ -2.43
ECHDC1-201ENST00000368287 IFNA17P01571 189 aa-0.15□□□□□ -2.43
ECHDC1-201ENST00000368287 SCIMPQ6UWF3 145 aa-0.15□□□□□ -2.43
ECHDC1-201ENST00000368287 DPH3Q96FX2 82 aa-0.15□□□□□ -2.43
ECHDC1-201ENST00000368287 LINC00312Q9Y6C7 94 aa-0.15□□□□□ -2.43
ECHDC1-201ENST00000368287 ABCA2Q9BZC7 2435 aa-0.15□□□□□ -2.43
ECHDC1-201ENST00000368287 NWD2Q9ULI1 1742 aa-0.16□□□□□ -2.43
ECHDC1-201ENST00000368287 HMCN2Q8NDA2 5059 aa-0.16□□□□□ -2.43
ECHDC1-201ENST00000368287 DOCK1Q14185 1865 aa-0.16□□□□□ -2.43
ECHDC1-201ENST00000368287 PTPRQQ9UMZ3 2332 aa-0.16□□□□□ -2.43
ECHDC1-201ENST00000368287 APOC4-APOC2K7ER74 178 aa-0.16□□□□□ -2.44
ECHDC1-201ENST00000368287 GUCA1AP43080 201 aaPredicted RBP-0.16□□□□□ -2.44
ECHDC1-201ENST00000368287 UBE2DNLQ8IWF7 75 aa-0.16□□□□□ -2.44
ECHDC1-201ENST00000368287 KCNRGQ8N5I3 272 aa-0.16□□□□□ -2.44
ECHDC1-201ENST00000368287 CSMD3Q7Z407 3707 aa-0.16□□□□□ -2.44
ECHDC1-201ENST00000368287 DAPK1P53355 1430 aa-0.16□□□□□ -2.44
ECHDC1-201ENST00000368287 CASKIN1Q8WXD9 1431 aa-0.16□□□□□ -2.44
ECHDC1-201ENST00000368287 BICRAQ9NZM4 1560 aa-0.16□□□□□ -2.44
ECHDC1-201ENST00000368287 PRDM2Q13029 1718 aa-0.16□□□□□ -2.44
ECHDC1-201ENST00000368287 PLXNB2O15031 1838 aa-0.17□□□□□ -2.44
ECHDC1-201ENST00000368287 NCOR1O75376 2440 aa-0.17□□□□□ -2.44
ECHDC1-201ENST00000368287 FAM208BQ5VWN6 2430 aa-0.17□□□□□ -2.44
ECHDC1-201ENST00000368287 FAM92AA1XBS5 289 aa-0.17□□□□□ -2.44
ECHDC1-201ENST00000368287 SMCO1Q147U7 214 aa-0.17□□□□□ -2.44
ECHDC1-201ENST00000368287 ZNF818PQ6ZRF7 136 aa-0.17□□□□□ -2.44
ECHDC1-201ENST00000368287 SEC11CQ9BY50 192 aa-0.17□□□□□ -2.44
ECHDC1-201ENST00000368287 SCP2D1Q9UJQ7 156 aa-0.17□□□□□ -2.44
ECHDC1-201ENST00000368287 C2CD3Q4AC94 2353 aa-0.18□□□□□ -2.44
ECHDC1-201ENST00000368287 HIST1H1DP16402 221 aaKnown RBP-0.18□□□□□ -2.44
ECHDC1-201ENST00000368287 TMEM191AQ9H0A3 160 aa-0.18□□□□□ -2.44
ECHDC1-201ENST00000368287 PLCE1Q9P212 2302 aa-0.18□□□□□ -2.44
ECHDC1-201ENST00000368287 CACNA1AO00555 2505 aa-0.19□□□□□ -2.44
ECHDC1-201ENST00000368287 MYOM3Q5VTT5 1437 aa-0.19□□□□□ -2.44
ECHDC1-201ENST00000368287 LRRC37A3O60309 1634 aa-0.19□□□□□ -2.44
ECHDC1-201ENST00000368287 PATJQ8NI35 1801 aa-0.19□□□□□ -2.44
ECHDC1-201ENST00000368287 ZNF236Q9UL36 1845 aa-0.19□□□□□ -2.44
ECHDC1-201ENST00000368287 TRBV10-3A0A0K0K1G6 114 aa-0.19□□□□□ -2.44
ECHDC1-201ENST00000368287 CCL8P80075 99 aa-0.19□□□□□ -2.44
ECHDC1-201ENST00000368287 AKAP6Q13023 2319 aa-0.19□□□□□ -2.44
ECHDC1-201ENST00000368287 PHLPP1O60346 1717 aa-0.19□□□□□ -2.44
ECHDC1-201ENST00000368287 FOCADQ5VW36 1801 aa-0.2□□□□□ -2.44
ECHDC1-201ENST00000368287 ZNF518AQ6AHZ1 1483 aa-0.2□□□□□ -2.44
ECHDC1-201ENST00000368287 ARAP2Q8WZ64 1704 aa-0.2□□□□□ -2.44
ECHDC1-201ENST00000368287 RBM3P98179 157 aaKnown RBP-0.2□□□□□ -2.44
ECHDC1-201ENST00000368287 Q5VV11 94 aa-0.2□□□□□ -2.44
ECHDC1-201ENST00000368287 BAGE3Q86Y29 109 aa-0.2□□□□□ -2.44
ECHDC1-201ENST00000368287 PFDN5Q99471 154 aa-0.2□□□□□ -2.44
ECHDC1-201ENST00000368287 MYH7P12883 1935 aa-0.21□□□□□ -2.44
ECHDC1-201ENST00000368287 FLNCQ14315 2725 aa-0.21□□□□□ -2.44
ECHDC1-201ENST00000368287 IFT140Q96RY7 1462 aa-0.21□□□□□ -2.44
ECHDC1-201ENST00000368287 WNK3Q9BYP7 1800 aa-0.21□□□□□ -2.44
ECHDC1-201ENST00000368287 HCG22E2RYF7 251 aa-0.21□□□□□ -2.44
ECHDC1-201ENST00000368287 IFITM1P13164 125 aa-0.21□□□□□ -2.44
ECHDC1-201ENST00000368287 CCL18P55774 89 aa-0.21□□□□□ -2.44
ECHDC1-201ENST00000368287 CFAP126Q5VTH2 177 aa-0.21□□□□□ -2.44
ECHDC1-201ENST00000368287 LSM10Q969L4 123 aaKnown RBP-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms