RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 MED14OSP0DP75 135 aa8.8□□□□□ -1
SYNE1-204ENST00000367248 C21orf62-AS1Q17RA5 79 aa8.8□□□□□ -1
SYNE1-204ENST00000367248 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.8□□□□□ -1
SYNE1-204ENST00000367248 MUC22E2RYF6 1773 aaPredicted RBP8.79□□□□□ -1
SYNE1-204ENST00000367248 C2CD3Q4AC94 2353 aa8.79□□□□□ -1
SYNE1-204ENST00000367248 C2orf82Q6UX34 121 aa8.79□□□□□ -1
SYNE1-204ENST00000367248 WFDC10AQ9H1F0 79 aa8.79□□□□□ -1
SYNE1-204ENST00000367248 DKK2Q9UBU2 259 aa8.79□□□□□ -1
SYNE1-204ENST00000367248 KMT2EQ8IZD2 1858 aa8.79□□□□□ -1
SYNE1-204ENST00000367248 ZNF295-AS1Q8N0V1 137 aa8.79□□□□□ -1
SYNE1-204ENST00000367248 TM2D2Q9BX73 214 aa8.79□□□□□ -1
SYNE1-204ENST00000367248 ZFP2Q6ZN57 461 aa8.78□□□□□ -1
SYNE1-204ENST00000367248 UBE2AP49459 152 aa8.78□□□□□ -1
SYNE1-204ENST00000367248 MRPL52Q86TS9 123 aaKnown RBP8.78□□□□□ -1
SYNE1-204ENST00000367248 USP9YO00507 2555 aaPredicted RBP8.78□□□□□ -1
SYNE1-204ENST00000367248 K7EQG2 157 aa8.78□□□□□ -1
SYNE1-204ENST00000367248 MDFICQ9P1T7 246 aa8.78□□□□□ -1
SYNE1-204ENST00000367248 ARHGAP32A7KAX9 2087 aa8.78□□□□□ -1
SYNE1-204ENST00000367248 ZNF106Q9H2Y7 1883 aaKnown RBP8.78□□□□□ -1
SYNE1-204ENST00000367248 NDUFS5O43920 106 aa8.78□□□□□ -1
SYNE1-204ENST00000367248 COX7A2LO14548 114 aa8.77□□□□□ -1
SYNE1-204ENST00000367248 HIGD2BQ4VC39 106 aa8.77□□□□□ -1
SYNE1-204ENST00000367248 ETDCA0A1B0GVM5 59 aa8.77□□□□□ -1.01
SYNE1-204ENST00000367248 DEFB114Q30KQ6 69 aa8.77□□□□□ -1.01
SYNE1-204ENST00000367248 COX8AP10176 69 aa8.77□□□□□ -1.01
SYNE1-204ENST00000367248 DAZ2Q13117 558 aaKnown RBP8.77□□□□□ -1.01
SYNE1-204ENST00000367248 DAZ4Q86SG3 579 aaKnown RBP8.77□□□□□ -1.01
SYNE1-204ENST00000367248 DAZ3Q9NR90 486 aaKnown RBP8.77□□□□□ -1.01
SYNE1-204ENST00000367248 TRAV8-4A0A0B4J246 113 aa8.77□□□□□ -1.01
SYNE1-204ENST00000367248 Q8N6K4 173 aa8.77□□□□□ -1.01
SYNE1-204ENST00000367248 ABCA12Q86UK0 2595 aa8.77□□□□□ -1.01
SYNE1-204ENST00000367248 TRAV4A0A0B4J268 109 aa8.77□□□□□ -1.01
SYNE1-204ENST00000367248 A0A0J9YXV3 536 aa8.77□□□□□ -1.01
SYNE1-204ENST00000367248 CTRLP40313 264 aa8.77□□□□□ -1.01
SYNE1-204ENST00000367248 GAGE2AQ6NT46 116 aa8.76□□□□□ -1.01
SYNE1-204ENST00000367248 Q6ZS46 218 aa8.76□□□□□ -1.01
SYNE1-204ENST00000367248 TMEM263Q8WUH6 116 aaKnown RBP8.76□□□□□ -1.01
SYNE1-204ENST00000367248 UTRNP46939 3433 aa8.76□□□□□ -1.01
SYNE1-204ENST00000367248 COA6Q5JTJ3 125 aaKnown RBP8.76□□□□□ -1.01
SYNE1-204ENST00000367248 C4orf48Q5BLP8 95 aa8.76□□□□□ -1.01
SYNE1-204ENST00000367248 Q6ZTI0 123 aa8.76□□□□□ -1.01
SYNE1-204ENST00000367248 LECT2O14960 151 aa8.75□□□□□ -1.01
SYNE1-204ENST00000367248 Q9H8V8 135 aa8.75□□□□□ -1.01
SYNE1-204ENST00000367248 PSMG3-AS1Q96PY0 264 aa8.75□□□□□ -1.01
SYNE1-204ENST00000367248 SLC25A29Q8N8R3 303 aa8.75□□□□□ -1.01
SYNE1-204ENST00000367248 C19orf71A6NCJ1 209 aa8.75□□□□□ -1.01
SYNE1-204ENST00000367248 PRO0255Q9UI72 69 aa8.75□□□□□ -1.01
SYNE1-204ENST00000367248 TRBV7-3A0A075B6L6 115 aa8.75□□□□□ -1.01
SYNE1-204ENST00000367248 AVPP01185 164 aa8.74□□□□□ -1.01
SYNE1-204ENST00000367248 TP53TG3Q9ULZ0 132 aa8.74□□□□□ -1.01
SYNE1-204ENST00000367248 FGF6P10767 208 aa8.74□□□□□ -1.01
SYNE1-204ENST00000367248 ZFAND3Q9H8U3 227 aa8.74□□□□□ -1.01
SYNE1-204ENST00000367248 ZNF702PQ9H963 129 aa8.74□□□□□ -1.01
SYNE1-204ENST00000367248 PCNX3Q9H6A9 2034 aa8.74□□□□□ -1.01
SYNE1-204ENST00000367248 OBSL1O75147 1896 aa8.74□□□□□ -1.01
SYNE1-204ENST00000367248 C9JAW5 83 aa8.73□□□□□ -1.01
SYNE1-204ENST00000367248 IGHV4-28A0A0C4DH34 117 aa8.73□□□□□ -1.01
SYNE1-204ENST00000367248 CRYGDP07320 174 aa8.73□□□□□ -1.01
SYNE1-204ENST00000367248 ZNF80P51504 273 aaPredicted RBP8.73□□□□□ -1.01
SYNE1-204ENST00000367248 TANC2Q9HCD6 1990 aa8.73□□□□□ -1.01
SYNE1-204ENST00000367248 P0DMU3 169 aa8.73□□□□□ -1.01
SYNE1-204ENST00000367248 FAM231AP0DMU4 169 aa8.73□□□□□ -1.01
SYNE1-204ENST00000367248 FAM231CP0DMU5 169 aa8.73□□□□□ -1.01
SYNE1-204ENST00000367248 ODF3Q96PU9 254 aa8.73□□□□□ -1.01
SYNE1-204ENST00000367248 EPG5Q9HCE0 2579 aa8.73□□□□□ -1.01
SYNE1-204ENST00000367248 hADV29S1A0JD25 119 aa8.73□□□□□ -1.01
SYNE1-204ENST00000367248 MTURNQ8N3F0 131 aa8.73□□□□□ -1.01
SYNE1-204ENST00000367248 A0A1W2PPR1 153 aa8.73□□□□□ -1.01
SYNE1-204ENST00000367248 TRAV12-1A0A0B4J245 112 aa8.72□□□□□ -1.01
SYNE1-204ENST00000367248 TRBV10-1A0A0K0K1A3 114 aa8.72□□□□□ -1.01
SYNE1-204ENST00000367248 DLEU1O43261 78 aa8.72□□□□□ -1.01
SYNE1-204ENST00000367248 NCR3O14931 201 aa8.71□□□□□ -1.01
SYNE1-204ENST00000367248 RPL39P62891 51 aaKnown RBP8.71□□□□□ -1.01
SYNE1-204ENST00000367248 PRO1854Q9UHT4 67 aa8.71□□□□□ -1.01
SYNE1-204ENST00000367248 TRAV13-2A0A0B4J235 113 aa8.71□□□□□ -1.02
SYNE1-204ENST00000367248 PSMB8P28062 276 aa8.71□□□□□ -1.02
SYNE1-204ENST00000367248 TINCRA0A1B0GVN0 87 aa8.7□□□□□ -1.02
SYNE1-204ENST00000367248 SETD2Q9BYW2 2564 aaPredicted RBP8.7□□□□□ -1.02
SYNE1-204ENST00000367248 HERV-K104P63124 156 aa8.7□□□□□ -1.02
SYNE1-204ENST00000367248 OCIAD2Q56VL3 154 aa8.7□□□□□ -1.02
SYNE1-204ENST00000367248 DSCAML1Q8TD84 2053 aa8.7□□□□□ -1.02
SYNE1-204ENST00000367248 A0A096LNI7 61 aa8.7□□□□□ -1.02
SYNE1-204ENST00000367248 CCL25O15444 150 aa8.7□□□□□ -1.02
SYNE1-204ENST00000367248 FN1P02751 2386 aaKnown RBP8.7□□□□□ -1.02
SYNE1-204ENST00000367248 HAMPP81172 84 aa8.7□□□□□ -1.02
SYNE1-204ENST00000367248 C20orf203Q8NBC4 194 aa8.7□□□□□ -1.02
SYNE1-204ENST00000367248 NDUFA1O15239 70 aa8.7□□□□□ -1.02
SYNE1-204ENST00000367248 TRBV20-1A0A075B6N2 111 aa8.69□□□□□ -1.02
SYNE1-204ENST00000367248 GAGE12HA6NDE8 117 aa8.69□□□□□ -1.02
SYNE1-204ENST00000367248 SPAG11BQ08648 103 aa8.69□□□□□ -1.02
SYNE1-204ENST00000367248 LINC00173Q6ZV60 143 aa8.69□□□□□ -1.02
SYNE1-204ENST00000367248 DAND5Q8N907 189 aa8.69□□□□□ -1.02
SYNE1-204ENST00000367248 IGLV2-8P01709 118 aa8.69□□□□□ -1.02
SYNE1-204ENST00000367248 RETNQ9HD89 108 aa8.69□□□□□ -1.02
SYNE1-204ENST00000367248 POLQO75417 2590 aa8.69□□□□□ -1.02
SYNE1-204ENST00000367248 ARHGAP21Q5T5U3 1957 aa8.69□□□□□ -1.02
SYNE1-204ENST00000367248 SIVA1O15304 175 aa8.69□□□□□ -1.02
SYNE1-204ENST00000367248 NUPR1O60356 82 aa8.69□□□□□ -1.02
SYNE1-204ENST00000367248 FRMD6-AS1P0C7T7 363 aa8.69□□□□□ -1.02
SYNE1-204ENST00000367248 UBE2V1Q13404 147 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms