RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 EPG5Q9HCE0 2579 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 MYH7P12883 1935 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 A0A1B0GX51 115 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 RBAKDNA6NC62 111 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 YPEL1O60688 119 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 RBP4P02753 201 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 COX4I1P13073 169 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 HLA-DRB4P13762 266 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 CMPK1P30085 196 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 EMX2Q04743 252 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 KRTAP6-1Q3LI64 71 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 TMEM244Q5VVB8 128 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 TMEM91Q6ZNR0 172 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 TCTE3Q8IZS6 198 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 SMIM11BQ8TCY0 68 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 DYNLRB2Q8TF09 96 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 MAGOHBQ96A72 148 aaKnown RBP-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 GINS2Q9Y248 185 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 DNAJC15Q9Y5T4 150 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 HLA-DRB4X5D2U9 266 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 C5orf42Q9H799 3197 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 CUBNO60494 3623 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 PLCE1Q9P212 2302 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 IFT172Q9UG01 1749 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 PRRC2CQ9Y520 2896 aaKnown RBP-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 LRP1BQ9NZR2 4599 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 MAP1AP78559 2803 aaPredicted RBP-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 FLNCQ14315 2725 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 ITPR2Q14571 2701 aa-0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 DMXL2Q8TDJ6 3036 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 ASPMQ8IZT6 3477 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 MAP1BP46821 2468 aaKnown RBP-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 DYNC1H1Q14204 4646 aaKnown RBP-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 SVEP1Q4LDE5 3571 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 PRDM2Q13029 1718 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 GVQW2A0A096LPI5 108 aaPredicted RBP-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 GNG14A0A1W2PPG7 69 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 H0YJX3 145 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 J3QLW9 94 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 DEGS1O15121 323 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 TNFSF15O95150 251 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 APODP05090 189 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 NMBP08949 121 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 SLC25A6P12236 298 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 RPS28P62857 69 aaKnown RBP-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 CCDC153Q494R4 210 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 CLLU1Q5K131 121 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 FAM74A4Q5TZK3 123 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 OR2T2Q6IF00 324 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 NDUFA11Q86Y39 141 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 ATP6V0E2Q8NHE4 81 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 IFI27L1Q96BM0 104 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 ERG28Q9UKR5 140 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 U3KQA8 63 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 CCDC168Q8NDH2 2452 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 MXRA5Q9NR99 2828 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 CENPFP49454 3210 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 ITPR1Q14643 2758 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 SYNJ1O43426 1573 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 WDFY3Q8IZQ1 3526 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 CFAP46Q8IYW2 2715 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 GCN1Q92616 2671 aaKnown RBP-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 CEP295Q9C0D2 2601 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 CDH23Q9H251 3354 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 CSMD3Q7Z407 3707 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 ARAP1Q96P48 1450 aa-0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 GOLGB1Q14789 3259 aaKnown RBP-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 RANBP2P49792 3224 aaKnown RBP-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 FREM2Q5SZK8 3169 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 TNXBP22105 4242 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 FAM208BQ5VWN6 2430 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 C2CD3Q4AC94 2353 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 FLNBO75369 2602 aaKnown RBP-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 NBEAQ8NFP9 2946 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 TRBV7-1A0A0A6YYK4 115 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 CCDC179H3BU77 68 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 SCTP09683 121 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 ACYP2P14621 99 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 CCL3L1P16619 93 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 MT4P47944 62 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 NPC2P61916 151 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 SSBP1Q04837 148 aaKnown RBP-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 KRTAP20-2Q3LI61 65 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 KRTAP19-6Q3LI70 58 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 SLC48A1Q6P1K1 146 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 C4orf33Q8N1A6 199 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 MRPL40Q9NQ50 206 aaKnown RBP-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 TMEM242Q9NWH2 141 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 SPANXCQ9NY87 97 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 HIGD1AQ9Y241 93 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 LSM2Q9Y333 95 aaKnown RBP-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 MYO9AB2RTY4 2548 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 TLN1Q9Y490 2541 aaKnown RBP-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 BRCA2P51587 3418 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 TEX15Q9BXT5 2789 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 PATJQ8NI35 1801 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 KALRNO60229 2985 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 CHD7Q9P2D1 2997 aa-0.04□□□□□ -2.42
RNU4-48P-201ENST00000365559 KDM3BQ7LBC6 1761 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms