RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 UBE2D1P51668 147 aa-0.13□□□□□ -2.43
RNU4-56P-201ENST00000364700 Q5BKY6 102 aa-0.13□□□□□ -2.43
RNU4-56P-201ENST00000364700 C9orf116Q5BN46 136 aaPredicted RBP-0.13□□□□□ -2.43
RNU4-56P-201ENST00000364700 SLC48A1Q6P1K1 146 aa-0.13□□□□□ -2.43
RNU4-56P-201ENST00000364700 Q6ZUT4 128 aa-0.13□□□□□ -2.43
RNU4-56P-201ENST00000364700 C4orf33Q8N1A6 199 aa-0.13□□□□□ -2.43
RNU4-56P-201ENST00000364700 C10orf82Q8WW14 230 aa-0.13□□□□□ -2.43
RNU4-56P-201ENST00000364700 SMIM3Q9BZL3 60 aa-0.13□□□□□ -2.43
RNU4-56P-201ENST00000364700 SAR1AQ9NR31 198 aa-0.13□□□□□ -2.43
RNU4-56P-201ENST00000364700 BATF3Q9NR55 127 aa-0.13□□□□□ -2.43
RNU4-56P-201ENST00000364700 PATJQ8NI35 1801 aa-0.13□□□□□ -2.43
RNU4-56P-201ENST00000364700 ZMYM4Q5VZL5 1548 aa-0.13□□□□□ -2.43
RNU4-56P-201ENST00000364700 FAT2Q9NYQ8 4349 aa-0.14□□□□□ -2.43
RNU4-56P-201ENST00000364700 IBTKQ9P2D0 1353 aaPredicted RBP-0.14□□□□□ -2.43
RNU4-56P-201ENST00000364700 SPEF2Q9C093 1822 aa-0.14□□□□□ -2.43
RNU4-56P-201ENST00000364700 TRBV7-1A0A0A6YYK4 115 aa-0.14□□□□□ -2.43
RNU4-56P-201ENST00000364700 G3V318 75 aa-0.14□□□□□ -2.43
RNU4-56P-201ENST00000364700 NPFFO15130 113 aa-0.14□□□□□ -2.43
RNU4-56P-201ENST00000364700 NMBP08949 121 aa-0.14□□□□□ -2.43
RNU4-56P-201ENST00000364700 CTAGE3PQ8IX95 158 aa-0.14□□□□□ -2.43
RNU4-56P-201ENST00000364700 DOPEY2Q9Y3R5 2298 aa-0.14□□□□□ -2.43
RNU4-56P-201ENST00000364700 IFT172Q9UG01 1749 aa-0.14□□□□□ -2.43
RNU4-56P-201ENST00000364700 PI4KAP42356 2102 aa-0.14□□□□□ -2.43
RNU4-56P-201ENST00000364700 MYH7P12883 1935 aa-0.15□□□□□ -2.43
RNU4-56P-201ENST00000364700 BICRAQ9NZM4 1560 aa-0.15□□□□□ -2.43
RNU4-56P-201ENST00000364700 PRDM2Q13029 1718 aa-0.15□□□□□ -2.43
RNU4-56P-201ENST00000364700 TRGV1A0A0A0MS02 117 aa-0.15□□□□□ -2.43
RNU4-56P-201ENST00000364700 F2Z2F3 143 aa-0.15□□□□□ -2.43
RNU4-56P-201ENST00000364700 COX4I1P13073 169 aa-0.15□□□□□ -2.43
RNU4-56P-201ENST00000364700 SMIM21Q3B7S5 101 aa-0.15□□□□□ -2.43
RNU4-56P-201ENST00000364700 SPANXN1Q5VSR9 72 aa-0.15□□□□□ -2.43
RNU4-56P-201ENST00000364700 Q6ZRX8 168 aa-0.15□□□□□ -2.43
RNU4-56P-201ENST00000364700 WFDC6Q9BQY6 131 aa-0.15□□□□□ -2.43
RNU4-56P-201ENST00000364700 TMEM242Q9NWH2 141 aa-0.15□□□□□ -2.43
RNU4-56P-201ENST00000364700 PHLPP1O60346 1717 aa-0.16□□□□□ -2.43
RNU4-56P-201ENST00000364700 UBE2G1P62253 170 aa-0.16□□□□□ -2.44
RNU4-56P-201ENST00000364700 INSL4Q14641 139 aa-0.16□□□□□ -2.44
RNU4-56P-201ENST00000364700 ANP32BQ92688 251 aaKnown RBP-0.16□□□□□ -2.44
RNU4-56P-201ENST00000364700 V9GYV3 84 aa-0.16□□□□□ -2.44
RNU4-56P-201ENST00000364700 BSNQ9UPA5 3926 aa-0.16□□□□□ -2.44
RNU4-56P-201ENST00000364700 NWD2Q9ULI1 1742 aa-0.16□□□□□ -2.44
RNU4-56P-201ENST00000364700 MYCBP2O75592 4640 aa-0.16□□□□□ -2.44
RNU4-56P-201ENST00000364700 TNXBP22105 4242 aa-0.16□□□□□ -2.44
RNU4-56P-201ENST00000364700 LAMC1P11047 1609 aa-0.16□□□□□ -2.44
RNU4-56P-201ENST00000364700 SPTBN1Q01082 2364 aaKnown RBP-0.17□□□□□ -2.44
RNU4-56P-201ENST00000364700 WNK3Q9BYP7 1800 aa-0.17□□□□□ -2.44
RNU4-56P-201ENST00000364700 GVINP1Q7Z2Y8 2422 aa-0.17□□□□□ -2.44
RNU4-56P-201ENST00000364700 EDDM3BP56851 147 aa-0.17□□□□□ -2.44
RNU4-56P-201ENST00000364700 RPS25P62851 125 aaKnown RBP-0.17□□□□□ -2.44
RNU4-56P-201ENST00000364700 KRTAP6-1Q3LI64 71 aa-0.17□□□□□ -2.44
RNU4-56P-201ENST00000364700 Q5VV11 94 aa-0.17□□□□□ -2.44
RNU4-56P-201ENST00000364700 DCHS2Q6V1P9 2916 aa-0.17□□□□□ -2.44
RNU4-56P-201ENST00000364700 ZFHX3Q15911 3703 aa-0.17□□□□□ -2.44
RNU4-56P-201ENST00000364700 MYOM3Q5VTT5 1437 aa-0.18□□□□□ -2.44
RNU4-56P-201ENST00000364700 PKDREJQ9NTG1 2253 aa-0.18□□□□□ -2.44
RNU4-56P-201ENST00000364700 KDM3BQ7LBC6 1761 aa-0.18□□□□□ -2.44
RNU4-56P-201ENST00000364700 TMEM14DPA8MWL7 114 aa-0.18□□□□□ -2.44
RNU4-56P-201ENST00000364700 M0R2Z0 102 aa-0.18□□□□□ -2.44
RNU4-56P-201ENST00000364700 ACYP2P14621 99 aa-0.18□□□□□ -2.44
RNU4-56P-201ENST00000364700 COX6A2Q02221 97 aa-0.18□□□□□ -2.44
RNU4-56P-201ENST00000364700 SCIMPQ6UWF3 145 aa-0.18□□□□□ -2.44
RNU4-56P-201ENST00000364700 MAFIPQ8WZ33 124 aa-0.18□□□□□ -2.44
RNU4-56P-201ENST00000364700 DPH3Q96FX2 82 aa-0.18□□□□□ -2.44
RNU4-56P-201ENST00000364700 LRRC37A3O60309 1634 aa-0.18□□□□□ -2.44
RNU4-56P-201ENST00000364700 DOCK2Q92608 1830 aa-0.18□□□□□ -2.44
RNU4-56P-201ENST00000364700 USF3Q68DE3 2245 aa-0.18□□□□□ -2.44
RNU4-56P-201ENST00000364700 HSPG2P98160 4391 aa-0.18□□□□□ -2.44
RNU4-56P-201ENST00000364700 DAPK1P53355 1430 aa-0.19□□□□□ -2.44
RNU4-56P-201ENST00000364700 ZNF236Q9UL36 1845 aa-0.19□□□□□ -2.44
RNU4-56P-201ENST00000364700 FLNAP21333 2647 aaKnown RBP-0.19□□□□□ -2.44
RNU4-56P-201ENST00000364700 SPINK1P00995 79 aa-0.19□□□□□ -2.44
RNU4-56P-201ENST00000364700 FAM74A4Q5TZK3 123 aa-0.19□□□□□ -2.44
RNU4-56P-201ENST00000364700 COPZ2Q9P299 210 aa-0.19□□□□□ -2.44
RNU4-56P-201ENST00000364700 LPAP08519 4548 aa-0.19□□□□□ -2.44
RNU4-56P-201ENST00000364700 PIEZO2Q9H5I5 2752 aa-0.19□□□□□ -2.44
RNU4-56P-201ENST00000364700 GRIN2AQ12879 1464 aa-0.2□□□□□ -2.44
RNU4-56P-201ENST00000364700 PXDNQ92626 1479 aa-0.2□□□□□ -2.44
RNU4-56P-201ENST00000364700 J3QR89 54 aa-0.2□□□□□ -2.44
RNU4-56P-201ENST00000364700 K7ERU9 68 aa-0.2□□□□□ -2.44
RNU4-56P-201ENST00000364700 APODP05090 189 aa-0.2□□□□□ -2.44
RNU4-56P-201ENST00000364700 ZNF818PQ6ZRF7 136 aa-0.2□□□□□ -2.44
RNU4-56P-201ENST00000364700 TSTD1Q8NFU3 115 aa-0.2□□□□□ -2.44
RNU4-56P-201ENST00000364700 RPRMQ9NS64 109 aa-0.2□□□□□ -2.44
RNU4-56P-201ENST00000364700 MYO7BQ6PIF6 2116 aa-0.2□□□□□ -2.44
RNU4-56P-201ENST00000364700 BIVM-ERCC5R4GMW8 1640 aa-0.2□□□□□ -2.44
RNU4-56P-201ENST00000364700 PTPN13Q12923 2485 aa-0.21□□□□□ -2.44
RNU4-56P-201ENST00000364700 LRP2P98164 4655 aa-0.21□□□□□ -2.44
RNU4-56P-201ENST00000364700 IFT140Q96RY7 1462 aa-0.21□□□□□ -2.44
RNU4-56P-201ENST00000364700 CBLN1P23435 193 aa-0.21□□□□□ -2.44
RNU4-56P-201ENST00000364700 GUCA1AP43080 201 aaPredicted RBP-0.21□□□□□ -2.44
RNU4-56P-201ENST00000364700 COPZ1P61923 177 aa-0.21□□□□□ -2.44
RNU4-56P-201ENST00000364700 RRAS2P62070 204 aaPredicted RBP-0.21□□□□□ -2.44
RNU4-56P-201ENST00000364700 CCL8P80075 99 aa-0.21□□□□□ -2.44
RNU4-56P-201ENST00000364700 TMEM191AQ9H0A3 160 aa-0.21□□□□□ -2.44
RNU4-56P-201ENST00000364700 U3KQA8 63 aa-0.21□□□□□ -2.44
RNU4-56P-201ENST00000364700 ATRQ13535 2644 aa-0.21□□□□□ -2.44
RNU4-56P-201ENST00000364700 CASKIN1Q8WXD9 1431 aa-0.21□□□□□ -2.44
RNU4-56P-201ENST00000364700 ZNF518AQ6AHZ1 1483 aa-0.22□□□□□ -2.44
RNU4-56P-201ENST00000364700 SPAARA0A1B0GVQ0 90 aa-0.22□□□□□ -2.44
RNU4-56P-201ENST00000364700 NDUFB6O95139 128 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms