RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 J3QLI3 93 aa14.29□□□□□ -0.12
CMTM3-201ENST00000361909 LEPROTO15243 131 aa14.29□□□□□ -0.12
CMTM3-201ENST00000361909 POLR2KP53803 58 aaKnown RBP14.29□□□□□ -0.12
CMTM3-201ENST00000361909 TMEM170BQ5T4T1 132 aa14.29□□□□□ -0.12
CMTM3-201ENST00000361909 CFAP161Q6P656 301 aa14.29□□□□□ -0.12
CMTM3-201ENST00000361909 A4D1N5 150 aa14.29□□□□□ -0.12
CMTM3-201ENST00000361909 LINC01620Q4KN68 170 aa14.29□□□□□ -0.12
CMTM3-201ENST00000361909 TRAV8-4A0A0B4J246 113 aa14.28□□□□□ -0.12
CMTM3-201ENST00000361909 CLEC19AQ6UXS0 136 aa14.28□□□□□ -0.12
CMTM3-201ENST00000361909 Q6ZQT7 251 aa14.28□□□□□ -0.12
CMTM3-201ENST00000361909 Q8N1Y9 231 aa14.28□□□□□ -0.12
CMTM3-201ENST00000361909 TRBV10-2A0A0K0K1G8 114 aa14.27□□□□□ -0.12
CMTM3-201ENST00000361909 SDHAF1A6NFY7 115 aa14.27□□□□□ -0.13
CMTM3-201ENST00000361909 ARL3P36405 182 aa14.27□□□□□ -0.13
CMTM3-201ENST00000361909 ECSCRQ19T08 205 aa14.27□□□□□ -0.13
CMTM3-201ENST00000361909 ANXA2RQ3ZCQ2 193 aa14.27□□□□□ -0.13
CMTM3-201ENST00000361909 NTN5Q8WTR8 489 aaPredicted RBP14.27□□□□□ -0.13
CMTM3-201ENST00000361909 FAM19A4Q96LR4 140 aa14.27□□□□□ -0.13
CMTM3-201ENST00000361909 TRAV4A0A0B4J268 109 aa14.26□□□□□ -0.13
CMTM3-201ENST00000361909 TRBV30A0A0K0K1B3 111 aa14.26□□□□□ -0.13
CMTM3-201ENST00000361909 TGFAP01135 160 aa14.26□□□□□ -0.13
CMTM3-201ENST00000361909 KIF25-AS1Q9Y6Z4 181 aa14.26□□□□□ -0.13
CMTM3-201ENST00000361909 VPS13CQ709C8 3753 aa14.26□□□□□ -0.13
CMTM3-201ENST00000361909 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.26□□□□□ -0.134e-6■■□□□ 13.3
CMTM3-201ENST00000361909 TRBV6-5A0A0K0K1A5 114 aa14.26□□□□□ -0.13
CMTM3-201ENST00000361909 IGHV4-38-2P0DP08 117 aa14.26□□□□□ -0.13
CMTM3-201ENST00000361909 FAM240AA0A1B0GVK7 77 aa14.25□□□□□ -0.13
CMTM3-201ENST00000361909 H3BMM0 161 aa14.25□□□□□ -0.13
CMTM3-201ENST00000361909 ZNRF2Q8NHG8 242 aa14.25□□□□□ -0.13
CMTM3-201ENST00000361909 UBE2WQ96B02 151 aa14.25□□□□□ -0.13
CMTM3-201ENST00000361909 RNASE3P12724 160 aaKnown RBP14.24□□□□□ -0.13
CMTM3-201ENST00000361909 LINC00315P59091 139 aa14.24□□□□□ -0.13
CMTM3-201ENST00000361909 TRPT1Q86TN4 253 aaKnown RBP14.24□□□□□ -0.13
CMTM3-201ENST00000361909 KRTAP1-3Q8IUG1 177 aa14.24□□□□□ -0.13
CMTM3-201ENST00000361909 CENPEQ02224 2701 aa14.24□□□□□ -0.13
CMTM3-201ENST00000361909 TRBV27A0A0K0K1C4 114 aa14.24□□□□□ -0.13
CMTM3-201ENST00000361909 TMEM223A0PJW6 202 aa14.24□□□□□ -0.13
CMTM3-201ENST00000361909 ATP6V0E1O15342 81 aa14.24□□□□□ -0.13
CMTM3-201ENST00000361909 RHOHQ15669 191 aa14.24□□□□□ -0.13
CMTM3-201ENST00000361909 BRD3OSQ6XYD6 125 aa14.24□□□□□ -0.13
CMTM3-201ENST00000361909 IGHV3OR16-13A0A075B7E8 117 aa14.23□□□□□ -0.13
CMTM3-201ENST00000361909 IGHV3OR16-10A0A075B7F0 116 aa14.23□□□□□ -0.13
CMTM3-201ENST00000361909 IGHV3-74A0A0B4J1X5 117 aa14.23□□□□□ -0.13
CMTM3-201ENST00000361909 H3BT86 120 aa14.23□□□□□ -0.13
CMTM3-201ENST00000361909 IGHV4-31P0DP07 118 aa14.23□□□□□ -0.13
CMTM3-201ENST00000361909 CRIP2P52943 208 aaPredicted RBP14.23□□□□□ -0.13
CMTM3-201ENST00000361909 Q96MF0 132 aa14.23□□□□□ -0.13
CMTM3-201ENST00000361909 M0R2P5 195 aa14.23□□□□□ -0.13
CMTM3-201ENST00000361909 AVPP01185 164 aa14.23□□□□□ -0.13
CMTM3-201ENST00000361909 HIST2H2BCQ6DN03 193 aa14.23□□□□□ -0.13
CMTM3-201ENST00000361909 C20orf173Q96LM9 149 aa14.23□□□□□ -0.13
CMTM3-201ENST00000361909 ODF3Q96PU9 254 aa14.23□□□□□ -0.13
CMTM3-201ENST00000361909 HELZ2Q9BYK8 2649 aaKnown RBP14.23□□□□□ -0.13
CMTM3-201ENST00000361909 EMP1P54849 157 aa14.22□□□□□ -0.13
CMTM3-201ENST00000361909 NSUN5P1Q3KNT7 163 aa14.22□□□□□ -0.13
CMTM3-201ENST00000361909 NAV2Q8IVL1 2488 aa14.22□□□□□ -0.13
CMTM3-201ENST00000361909 APCP25054 2843 aa14.22□□□□□ -0.13
CMTM3-201ENST00000361909 CSMD2Q7Z408 3487 aa14.22□□□□□ -0.13
CMTM3-201ENST00000361909 POLQO75417 2590 aa14.22□□□□□ -0.13
CMTM3-201ENST00000361909 Q1RN00 199 aa14.22□□□□□ -0.13
CMTM3-201ENST00000361909 CR1P17927 2039 aa14.21□□□□□ -0.13
CMTM3-201ENST00000361909 FAM223BA6NKX1 122 aa14.21□□□□□ -0.13
CMTM3-201ENST00000361909 LGALS9O00182 355 aa14.21□□□□□ -0.13
CMTM3-201ENST00000361909 SOCS3O14543 225 aa14.21□□□□□ -0.13
CMTM3-201ENST00000361909 EIF4EBP3O60516 100 aaPredicted RBP14.21□□□□□ -0.13
CMTM3-201ENST00000361909 CRLF1O75462 422 aa14.21□□□□□ -0.13
CMTM3-201ENST00000361909 SUMO4Q6EEV6 95 aa14.21□□□□□ -0.13
CMTM3-201ENST00000361909 FAM223AQ8IWN6 122 aa14.21□□□□□ -0.13
CMTM3-201ENST00000361909 C15orf53Q8NAA6 179 aa14.21□□□□□ -0.13
CMTM3-201ENST00000361909 SPANXDQ9BXN6 97 aa14.21□□□□□ -0.13
CMTM3-201ENST00000361909 ABCA12Q86UK0 2595 aa14.21□□□□□ -0.14
CMTM3-201ENST00000361909 IGHV3-49A0A0A0MS15 119 aa14.2□□□□□ -0.14
CMTM3-201ENST00000361909 CCDC179H3BU77 68 aa14.2□□□□□ -0.14
CMTM3-201ENST00000361909 IGF1P05019 195 aa14.2□□□□□ -0.14
CMTM3-201ENST00000361909 MDFICQ9P1T7 246 aa14.2□□□□□ -0.14
CMTM3-201ENST00000361909 RPL39P62891 51 aaKnown RBP14.2□□□□□ -0.14
CMTM3-201ENST00000361909 MUSTN1Q8IVN3 82 aa14.2□□□□□ -0.14
CMTM3-201ENST00000361909 TRAV2A0A0B4J234 112 aa14.19□□□□□ -0.14
CMTM3-201ENST00000361909 MAPK1IP1LQ8NDC0 245 aa14.19□□□□□ -0.14
CMTM3-201ENST00000361909 RNASE4P34096 147 aaKnown RBP14.19□□□□□ -0.14
CMTM3-201ENST00000361909 C5orf56Q8N8D9 126 aa14.19□□□□□ -0.14
CMTM3-201ENST00000361909 MOB4Q9Y3A3 225 aa14.19□□□□□ -0.14
CMTM3-201ENST00000361909 J3KRW8 73 aa14.18□□□□□ -0.14
CMTM3-201ENST00000361909 PRRC2AP48634 2157 aaKnown RBP14.17□□□□□ -0.14
CMTM3-201ENST00000361909 COX6CP09669 75 aa14.17□□□□□ -0.14
CMTM3-201ENST00000361909 DEFB121Q5J5C9 76 aa14.17□□□□□ -0.14
CMTM3-201ENST00000361909 TEX49A0A1B0GTD5 131 aa14.16□□□□□ -0.14
CMTM3-201ENST00000361909 GNRH2O43555 120 aa14.16□□□□□ -0.14
CMTM3-201ENST00000361909 FSHBP01225 129 aa14.16□□□□□ -0.14
CMTM3-201ENST00000361909 C2orf82Q6UX34 121 aa14.16□□□□□ -0.14
CMTM3-201ENST00000361909 NDUFA4O00483 81 aa14.16□□□□□ -0.14
CMTM3-201ENST00000361909 ZNF22P17026 224 aaPredicted RBP14.16□□□□□ -0.14
CMTM3-201ENST00000361909 A6NDX4 124 aa14.15□□□□□ -0.14
CMTM3-201ENST00000361909 SPRY2O43597 315 aa14.15□□□□□ -0.14
CMTM3-201ENST00000361909 TRIAP1O43715 76 aa14.15□□□□□ -0.14
CMTM3-201ENST00000361909 TMEM126AQ9H061 195 aa14.15□□□□□ -0.14
CMTM3-201ENST00000361909 A0A0J9YXY3 114 aa14.15□□□□□ -0.15
CMTM3-201ENST00000361909 TRBV7-7A0A0K0K1E9 115 aa14.15□□□□□ -0.15
CMTM3-201ENST00000361909 H7C2G1 150 aa14.15□□□□□ -0.15
CMTM3-201ENST00000361909 FAM159AQ6UWV7 190 aa14.15□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms