RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 ATP6V0E2Q8NHE4 81 aa9.56□□□□□ -0.88
NSMCE1-201ENST00000361439 MRAP2Q96G30 205 aa9.56□□□□□ -0.88
NSMCE1-201ENST00000361439 UPK3BQ9BT76 320 aa9.56□□□□□ -0.88
NSMCE1-201ENST00000361439 GTSF1LQ9H1H1 148 aa9.56□□□□□ -0.88
NSMCE1-201ENST00000361439 NIT2Q9NQR4 276 aa9.56□□□□□ -0.88
NSMCE1-201ENST00000361439 GAGE12JA6NER3 117 aa9.55□□□□□ -0.88
NSMCE1-201ENST00000361439 RAB4AP20338 218 aa9.55□□□□□ -0.88
NSMCE1-201ENST00000361439 CAMPP49913 170 aa9.55□□□□□ -0.88
NSMCE1-201ENST00000361439 UBE2D3P61077 147 aa9.55□□□□□ -0.88
NSMCE1-201ENST00000361439 UBE2D2P62837 147 aa9.55□□□□□ -0.88
NSMCE1-201ENST00000361439 GAGE1Q13065 139 aa9.55□□□□□ -0.88
NSMCE1-201ENST00000361439 GAGE4Q13068 117 aa9.55□□□□□ -0.88
NSMCE1-201ENST00000361439 GAGE5Q13069 117 aa9.55□□□□□ -0.88
NSMCE1-201ENST00000361439 GAGE13Q4V321 117 aa9.55□□□□□ -0.88
NSMCE1-201ENST00000361439 DAZ4Q86SG3 579 aaKnown RBP9.55□□□□□ -0.88
NSMCE1-201ENST00000361439 UBE2DNLQ8IWF7 75 aa9.55□□□□□ -0.88
NSMCE1-201ENST00000361439 ZNRF2Q8NHG8 242 aa9.55□□□□□ -0.88
NSMCE1-201ENST00000361439 DAZ3Q9NR90 486 aaKnown RBP9.55□□□□□ -0.88
NSMCE1-201ENST00000361439 MRPS16Q9Y3D3 137 aaKnown RBP9.55□□□□□ -0.88
NSMCE1-201ENST00000361439 TNFRSF18Q9Y5U5 241 aa9.55□□□□□ -0.88
NSMCE1-201ENST00000361439 LYSTQ99698 3801 aa9.54□□□□□ -0.88
NSMCE1-201ENST00000361439 LY6G6CO95867 125 aa9.54□□□□□ -0.88
NSMCE1-201ENST00000361439 COX19Q49B96 90 aa9.54□□□□□ -0.88
NSMCE1-201ENST00000361439 TMEM97Q5BJF2 176 aa9.54□□□□□ -0.88
NSMCE1-201ENST00000361439 AMN1Q8IY45 258 aa9.54□□□□□ -0.88
NSMCE1-201ENST00000361439 RNF185Q96GF1 192 aa9.54□□□□□ -0.88
NSMCE1-201ENST00000361439 LINC00588Q9Y4M8 146 aa9.54□□□□□ -0.88
NSMCE1-201ENST00000361439 PPBPP02775 128 aa9.53□□□□□ -0.88
NSMCE1-201ENST00000361439 Q9UF83 564 aa9.53□□□□□ -0.88
NSMCE1-201ENST00000361439 ALMS1Q8TCU4 4167 aa9.53□□□□□ -0.88
NSMCE1-201ENST00000361439 TRBV6-5A0A0K0K1A5 114 aa9.52□□□□□ -0.89
NSMCE1-201ENST00000361439 LELP1Q5T871 98 aa9.52□□□□□ -0.89
NSMCE1-201ENST00000361439 TRAV26-2A0A0B4J265 109 aa9.51□□□□□ -0.89
NSMCE1-201ENST00000361439 K7EP13 123 aa9.51□□□□□ -0.89
NSMCE1-201ENST00000361439 MRPL51Q4U2R6 128 aaKnown RBP9.51□□□□□ -0.89
NSMCE1-201ENST00000361439 URGCP-MRPS24S4R325 110 aa9.51□□□□□ -0.89
NSMCE1-201ENST00000361439 DNAH1Q9P2D7 4330 aa9.51□□□□□ -0.89
NSMCE1-201ENST00000361439 VPS13DQ5THJ4 4388 aa9.5□□□□□ -0.89
NSMCE1-201ENST00000361439 TRAV8-6A0A0B4J262 113 aa9.5□□□□□ -0.89
NSMCE1-201ENST00000361439 PHOX2AO14813 284 aa9.5□□□□□ -0.89
NSMCE1-201ENST00000361439 OR10J3Q5JRS4 329 aa9.5□□□□□ -0.89
NSMCE1-201ENST00000361439 GNB1LQ9BYB4 327 aa9.5□□□□□ -0.89
NSMCE1-201ENST00000361439 Q9H8V8 135 aa9.5□□□□□ -0.89
NSMCE1-201ENST00000361439 KMT2CQ8NEZ4 4911 aaKnown RBP9.5□□□□□ -0.89
NSMCE1-201ENST00000361439 TRBV24-1A0A075B6N3 115 aa9.49□□□□□ -0.89
NSMCE1-201ENST00000361439 HLA-DQA1P01909 254 aa9.49□□□□□ -0.89
NSMCE1-201ENST00000361439 CKS2P33552 79 aa9.49□□□□□ -0.89
NSMCE1-201ENST00000361439 LAMTOR2Q9Y2Q5 125 aa9.49□□□□□ -0.89
NSMCE1-201ENST00000361439 SDHAF1A6NFY7 115 aa9.48□□□□□ -0.89
NSMCE1-201ENST00000361439 SIVA1O15304 175 aa9.48□□□□□ -0.89
NSMCE1-201ENST00000361439 MT-ND6P03923 174 aa9.48□□□□□ -0.89
NSMCE1-201ENST00000361439 RPL32P62910 135 aaKnown RBP9.48□□□□□ -0.89
NSMCE1-201ENST00000361439 ELOBQ15370 118 aa9.48□□□□□ -0.89
NSMCE1-201ENST00000361439 ORMDL3Q8N138 153 aa9.48□□□□□ -0.89
NSMCE1-201ENST00000361439 C20orf78Q9BR46 151 aa9.48□□□□□ -0.89
NSMCE1-201ENST00000361439 ST20Q9HBF5 79 aa9.48□□□□□ -0.89
NSMCE1-201ENST00000361439 SMCO4Q9NRQ5 59 aa9.48□□□□□ -0.89
NSMCE1-201ENST00000361439 TRBV6-8A0A0A6YYG3 113 aa9.47□□□□□ -0.89
NSMCE1-201ENST00000361439 NCR2O95944 276 aa9.47□□□□□ -0.89
NSMCE1-201ENST00000361439 PKIAP61925 76 aa9.47□□□□□ -0.89
NSMCE1-201ENST00000361439 ATRAIDQ6UW56 229 aa9.47□□□□□ -0.89
NSMCE1-201ENST00000361439 TMEM136Q6ZRR5 245 aa9.47□□□□□ -0.89
NSMCE1-201ENST00000361439 NRACQ8N912 160 aa9.47□□□□□ -0.89
NSMCE1-201ENST00000361439 RPL39LQ96EH5 51 aaKnown RBP9.47□□□□□ -0.89
NSMCE1-201ENST00000361439 TRBV27A0A0K0K1C4 114 aa9.46□□□□□ -0.9
NSMCE1-201ENST00000361439 I3L3M4 83 aa9.46□□□□□ -0.9
NSMCE1-201ENST00000361439 DNAH10OSP0CZ25 163 aa9.46□□□□□ -0.9
NSMCE1-201ENST00000361439 BTF3P20290 206 aaKnown RBP9.46□□□□□ -0.9
NSMCE1-201ENST00000361439 POLR2KP53803 58 aaKnown RBP9.46□□□□□ -0.9
NSMCE1-201ENST00000361439 SUMO2P61956 95 aaKnown RBP9.46□□□□□ -0.9
NSMCE1-201ENST00000361439 IQCJQ1A5X6 159 aa9.46□□□□□ -0.9
NSMCE1-201ENST00000361439 TTC32Q5I0X7 151 aa9.46□□□□□ -0.9
NSMCE1-201ENST00000361439 TMEM70Q9BUB7 260 aa9.46□□□□□ -0.9
NSMCE1-201ENST00000361439 CHCHD7Q9BUK0 85 aa9.46□□□□□ -0.9
NSMCE1-201ENST00000361439 SACSQ9NZJ4 4579 aa9.46□□□□□ -0.9
NSMCE1-201ENST00000361439 TRBV25-1A0A075B6N4 114 aa9.45□□□□□ -0.9
NSMCE1-201ENST00000361439 TRAV9-2A0A087WT02 112 aa9.45□□□□□ -0.9
NSMCE1-201ENST00000361439 IGHV3-38A0A0C4DH36 116 aa9.45□□□□□ -0.9
NSMCE1-201ENST00000361439 D6R8Y8 96 aa9.45□□□□□ -0.9
NSMCE1-201ENST00000361439 VCYO14598 125 aa9.45□□□□□ -0.9
NSMCE1-201ENST00000361439 TCAPO15273 167 aa9.45□□□□□ -0.9
NSMCE1-201ENST00000361439 RPS10P46783 165 aaKnown RBP9.45□□□□□ -0.9
NSMCE1-201ENST00000361439 COTL1Q14019 142 aa9.45□□□□□ -0.9
NSMCE1-201ENST00000361439 LINC01556Q5JQF7 62 aa9.45□□□□□ -0.9
NSMCE1-201ENST00000361439 IGHV1-24A0A0C4DH33 117 aa9.44□□□□□ -0.9
NSMCE1-201ENST00000361439 PRSS47A8MTI9 375 aa9.44□□□□□ -0.9
NSMCE1-201ENST00000361439 SMKR1H3BMG3 65 aa9.44□□□□□ -0.9
NSMCE1-201ENST00000361439 GAS8-AS1O95177 125 aa9.44□□□□□ -0.9
NSMCE1-201ENST00000361439 TNFRSF6BO95407 300 aa9.44□□□□□ -0.9
NSMCE1-201ENST00000361439 APCSP02743 223 aa9.44□□□□□ -0.9
NSMCE1-201ENST00000361439 C10orf126Q8N4M7 172 aa9.44□□□□□ -0.9
NSMCE1-201ENST00000361439 PRELID3AQ96N28 172 aa9.44□□□□□ -0.9
NSMCE1-201ENST00000361439 YPEL4Q96NS1 127 aa9.44□□□□□ -0.9
NSMCE1-201ENST00000361439 TGIF2-C20orf24A0A0A6YYL0 155 aa9.43□□□□□ -0.9
NSMCE1-201ENST00000361439 NBDYA0A0U1RRE5 68 aa9.43□□□□□ -0.9
NSMCE1-201ENST00000361439 PMCHP20382 165 aa9.43□□□□□ -0.9
NSMCE1-201ENST00000361439 Q6ZR54 194 aa9.43□□□□□ -0.9
NSMCE1-201ENST00000361439 NTM-AS1Q6ZSK4 140 aa9.43□□□□□ -0.9
NSMCE1-201ENST00000361439 WFDC10BQ8IUB3 73 aa9.43□□□□□ -0.9
NSMCE1-201ENST00000361439 KIR2DL4Q99706 377 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms