RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 CBLN2Q8IUK8 224 aa12.35□□□□□ -0.43
CLK2-202ENST00000361168 LINC00694P0DN24 101 aa12.35□□□□□ -0.43
CLK2-202ENST00000361168 RPS10P46783 165 aaKnown RBP12.35□□□□□ -0.43
CLK2-202ENST00000361168 TCTAP57738 103 aa12.35□□□□□ -0.43
CLK2-202ENST00000361168 KCNIP4Q6PIL6 250 aa12.35□□□□□ -0.43
CLK2-202ENST00000361168 LINC00588Q9Y4M8 146 aa12.35□□□□□ -0.43
CLK2-202ENST00000361168 RYR3Q15413 4870 aa12.34□□□□□ -0.43
CLK2-202ENST00000361168 TGIF2-C20orf24A0A0A6YYL0 155 aa12.34□□□□□ -0.43
CLK2-202ENST00000361168 IGHV3-38A0A0C4DH36 116 aa12.34□□□□□ -0.43
CLK2-202ENST00000361168 FAM104BQ5XKR9 115 aa12.34□□□□□ -0.43
CLK2-202ENST00000361168 ATP5L2Q7Z4Y8 100 aa12.34□□□□□ -0.43
CLK2-202ENST00000361168 LY6G6CO95867 125 aa12.33□□□□□ -0.44
CLK2-202ENST00000361168 ELOBQ15370 118 aa12.33□□□□□ -0.44
CLK2-202ENST00000361168 LYPD5Q6UWN5 251 aa12.33□□□□□ -0.44
CLK2-202ENST00000361168 NEGR1Q7Z3B1 354 aa12.33□□□□□ -0.44
CLK2-202ENST00000361168 TRBV7-3A0A075B6L6 115 aa12.33□□□□□ -0.44
CLK2-202ENST00000361168 MRPL51Q4U2R6 128 aaKnown RBP12.33□□□□□ -0.44
CLK2-202ENST00000361168 LINC00476Q8WZB0 136 aa12.33□□□□□ -0.44
CLK2-202ENST00000361168 A0A1B0GW15 77 aa12.32□□□□□ -0.44
CLK2-202ENST00000361168 SCO1O75880 301 aa12.32□□□□□ -0.44
CLK2-202ENST00000361168 S100PP25815 95 aa12.32□□□□□ -0.44
CLK2-202ENST00000361168 RASL11AQ6T310 242 aa12.32□□□□□ -0.44
CLK2-202ENST00000361168 TRBV10-1A0A0K0K1A3 114 aa12.31□□□□□ -0.44
CLK2-202ENST00000361168 UBE2D3P61077 147 aa12.31□□□□□ -0.44
CLK2-202ENST00000361168 UBE2D2P62837 147 aa12.31□□□□□ -0.44
CLK2-202ENST00000361168 ATP6V0E2Q8NHE4 81 aa12.31□□□□□ -0.44
CLK2-202ENST00000361168 RYR2Q92736 4967 aa12.31□□□□□ -0.44
CLK2-202ENST00000361168 TMEM136Q6ZRR5 245 aa12.31□□□□□ -0.44
CLK2-202ENST00000361168 DNAH2Q9P225 4427 aa12.3□□□□□ -0.44
CLK2-202ENST00000361168 RPL36AP83881 106 aaKnown RBP12.3□□□□□ -0.44
CLK2-202ENST00000361168 RPL36ALQ969Q0 106 aaKnown RBP12.3□□□□□ -0.44
CLK2-202ENST00000361168 YPEL4Q96NS1 127 aa12.3□□□□□ -0.44
CLK2-202ENST00000361168 NIT2Q9NQR4 276 aa12.3□□□□□ -0.44
CLK2-202ENST00000361168 ATP6V1G1O75348 118 aa12.29□□□□□ -0.44
CLK2-202ENST00000361168 LGALS9CQ6DKI2 356 aa12.29□□□□□ -0.44
CLK2-202ENST00000361168 D6R8Y8 96 aa12.28□□□□□ -0.44
CLK2-202ENST00000361168 H7C1H1 209 aa12.28□□□□□ -0.44
CLK2-202ENST00000361168 CCL18P55774 89 aa12.28□□□□□ -0.44
CLK2-202ENST00000361168 NRACQ8N912 160 aa12.28□□□□□ -0.44
CLK2-202ENST00000361168 TNFRSF18Q9Y5U5 241 aa12.28□□□□□ -0.44
CLK2-202ENST00000361168 TRAV9-1A0A075B6T8 112 aa12.27□□□□□ -0.44
CLK2-202ENST00000361168 S100A8P05109 93 aa12.27□□□□□ -0.44
CLK2-202ENST00000361168 UBE2DNLQ8IWF7 75 aa12.27□□□□□ -0.44
CLK2-202ENST00000361168 CKS2P33552 79 aa12.27□□□□□ -0.45
CLK2-202ENST00000361168 KIAA1644Q3SXP7 199 aa12.27□□□□□ -0.45
CLK2-202ENST00000361168 GTSF1LQ9H1H1 148 aa12.27□□□□□ -0.45
CLK2-202ENST00000361168 LCE6AA0A183 80 aa12.26□□□□□ -0.45
CLK2-202ENST00000361168 NTM-AS1Q6ZSK4 140 aa12.26□□□□□ -0.45
CLK2-202ENST00000361168 WFDC10BQ8IUB3 73 aa12.26□□□□□ -0.45
CLK2-202ENST00000361168 MRAP2Q96G30 205 aa12.26□□□□□ -0.45
CLK2-202ENST00000361168 IGLV2-18A0A075B6J9 118 aa12.25□□□□□ -0.45
CLK2-202ENST00000361168 OR10J3Q5JRS4 329 aa12.25□□□□□ -0.45
CLK2-202ENST00000361168 Q8N3U1 123 aa12.25□□□□□ -0.45
CLK2-202ENST00000361168 DNAH10Q8IVF4 4471 aa12.25□□□□□ -0.45
CLK2-202ENST00000361168 TRBV24-1A0A075B6N3 115 aa12.25□□□□□ -0.45
CLK2-202ENST00000361168 SDHAF1A6NFY7 115 aa12.25□□□□□ -0.45
CLK2-202ENST00000361168 NPYP01303 97 aa12.25□□□□□ -0.45
CLK2-202ENST00000361168 SMCO4Q9NRQ5 59 aa12.25□□□□□ -0.45
CLK2-202ENST00000361168 DNAJC30Q96LL9 226 aa12.24□□□□□ -0.45
CLK2-202ENST00000361168 MRPS16Q9Y3D3 137 aaKnown RBP12.23□□□□□ -0.45
CLK2-202ENST00000361168 SH2D6Q7Z4S9 175 aa12.23□□□□□ -0.45
CLK2-202ENST00000361168 TMEM70Q9BUB7 260 aa12.23□□□□□ -0.45
CLK2-202ENST00000361168 GNB1LQ9BYB4 327 aa12.23□□□□□ -0.45
CLK2-202ENST00000361168 TRBV6-5A0A0K0K1A5 114 aa12.22□□□□□ -0.45
CLK2-202ENST00000361168 TNFRSF6BO95407 300 aa12.22□□□□□ -0.45
CLK2-202ENST00000361168 Q9H8V8 135 aa12.22□□□□□ -0.45
CLK2-202ENST00000361168 POLR2KP53803 58 aaKnown RBP12.21□□□□□ -0.45
CLK2-202ENST00000361168 DAZ4Q86SG3 579 aaKnown RBP12.21□□□□□ -0.45
CLK2-202ENST00000361168 ORMDL3Q8N138 153 aa12.21□□□□□ -0.45
CLK2-202ENST00000361168 FRZBQ92765 325 aa12.21□□□□□ -0.45
CLK2-202ENST00000361168 DAZ3Q9NR90 486 aaKnown RBP12.21□□□□□ -0.45
CLK2-202ENST00000361168 DNAH6Q9C0G6 4158 aa12.21□□□□□ -0.46
CLK2-202ENST00000361168 TRBV6-8A0A0A6YYG3 113 aa12.21□□□□□ -0.46
CLK2-202ENST00000361168 M0R2N4 97 aa12.21□□□□□ -0.46
CLK2-202ENST00000361168 APCSP02743 223 aa12.21□□□□□ -0.46
CLK2-202ENST00000361168 LELP1Q5T871 98 aa12.21□□□□□ -0.46
CLK2-202ENST00000361168 UPK3BQ9BT76 320 aa12.21□□□□□ -0.46
CLK2-202ENST00000361168 MRPL18Q9H0U6 180 aaKnown RBP12.21□□□□□ -0.46
CLK2-202ENST00000361168 ST20Q9HBF5 79 aa12.21□□□□□ -0.46
CLK2-202ENST00000361168 FRAS1Q86XX4 4008 aa12.21□□□□□ -0.46
CLK2-202ENST00000361168 SUMO2P61956 95 aaKnown RBP12.2□□□□□ -0.46
CLK2-202ENST00000361168 PRELID3AQ96N28 172 aa12.2□□□□□ -0.46
CLK2-202ENST00000361168 KRTAP1-5Q9BYS1 174 aa12.2□□□□□ -0.46
CLK2-202ENST00000361168 HLA-DQA1P01909 254 aa12.19□□□□□ -0.46
CLK2-202ENST00000361168 TIRAPP58753 221 aa12.19□□□□□ -0.46
CLK2-202ENST00000361168 COLCA2A8K830 154 aa12.18□□□□□ -0.46
CLK2-202ENST00000361168 FABP9Q0Z7S8 132 aa12.18□□□□□ -0.46
CLK2-202ENST00000361168 TRBV27A0A0K0K1C4 114 aa12.17□□□□□ -0.46
CLK2-202ENST00000361168 LOC389332A0A1B0GUA5 103 aa12.17□□□□□ -0.46
CLK2-202ENST00000361168 SIVA1O15304 175 aa12.17□□□□□ -0.46
CLK2-202ENST00000361168 PPBPP02775 128 aa12.17□□□□□ -0.46
CLK2-202ENST00000361168 TRAPPC1Q9Y5R8 145 aa12.17□□□□□ -0.46
CLK2-202ENST00000361168 TSHBP01222 138 aa12.17□□□□□ -0.46
CLK2-202ENST00000361168 PMCHP20382 165 aa12.17□□□□□ -0.46
CLK2-202ENST00000361168 I3L3M4 83 aa12.16□□□□□ -0.46
CLK2-202ENST00000361168 IGHV3-30P01768 117 aa12.15□□□□□ -0.46
CLK2-202ENST00000361168 IGHV3-33P01772 117 aa12.15□□□□□ -0.46
CLK2-202ENST00000361168 IGHV3-30-3P0DP02 117 aa12.15□□□□□ -0.46
CLK2-202ENST00000361168 IGHV3-30-5P0DP03 117 aa12.15□□□□□ -0.46
CLK2-202ENST00000361168 S100A1P23297 94 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms