RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 TRBV10-2A0A0K0K1G8 114 aa17.55■□□□□ 0.4
NPAS3-203ENST00000357798 ELANEP08246 267 aa17.55■□□□□ 0.4
NPAS3-203ENST00000357798 GAGE2BQ13066 116 aa17.55■□□□□ 0.4
NPAS3-203ENST00000357798 GAGE2EQ4V326 116 aa17.55■□□□□ 0.4
NPAS3-203ENST00000357798 GAGE2DQ9UEU5 116 aa17.55■□□□□ 0.4
NPAS3-203ENST00000357798 FOXC1Q12948 553 aa17.55■□□□□ 0.4
NPAS3-203ENST00000357798 BRD3OSQ6XYD6 125 aa17.54■□□□□ 0.4
NPAS3-203ENST00000357798 RIF1Q5UIP0 2472 aaKnown RBP17.54■□□□□ 0.4
NPAS3-203ENST00000357798 IGLV1-40P01703 118 aa17.53■□□□□ 0.4
NPAS3-203ENST00000357798 Q6Q795 121 aa17.53■□□□□ 0.4
NPAS3-203ENST00000357798 NHLRC4P0CG21 123 aaPredicted RBP17.53■□□□□ 0.4
NPAS3-203ENST00000357798 KLRB1Q12918 225 aa17.53■□□□□ 0.4
NPAS3-203ENST00000357798 IGHV4-39P01824 125 aa17.52■□□□□ 0.4
NPAS3-203ENST00000357798 TRIAP1O43715 76 aa17.52■□□□□ 0.4
NPAS3-203ENST00000357798 EDN2P20800 178 aa17.52■□□□□ 0.4
NPAS3-203ENST00000357798 LY6EQ16553 131 aa17.52■□□□□ 0.4
NPAS3-203ENST00000357798 LITAFQ99732 161 aa17.52■□□□□ 0.4
NPAS3-203ENST00000357798 PTPRQQ9UMZ3 2332 aa17.52■□□□□ 0.39
NPAS3-203ENST00000357798 A6NDX4 124 aa17.51■□□□□ 0.39
NPAS3-203ENST00000357798 IGHV3-30-3P0DP02 117 aa17.51■□□□□ 0.39
NPAS3-203ENST00000357798 IGHV1OR15-1A0A075B7D0 117 aa17.51■□□□□ 0.39
NPAS3-203ENST00000357798 PYGO1Q9Y3Y4 419 aa17.51■□□□□ 0.39
NPAS3-203ENST00000357798 TRAV8-4A0A0B4J246 113 aa17.51■□□□□ 0.39
NPAS3-203ENST00000357798 TIMM21Q9BVV7 248 aa17.51■□□□□ 0.39
NPAS3-203ENST00000357798 ZNF580Q9UK33 172 aa17.51■□□□□ 0.39
NPAS3-203ENST00000357798 TRAV4A0A0B4J268 109 aa17.5■□□□□ 0.39
NPAS3-203ENST00000357798 NDUFV3P56181 108 aaKnown RBP17.5■□□□□ 0.39
NPAS3-203ENST00000357798 SPANXDQ9BXN6 97 aa17.5■□□□□ 0.39
NPAS3-203ENST00000357798 SPANXCQ9NY87 97 aa17.5■□□□□ 0.39
NPAS3-203ENST00000357798 H3BMM0 161 aa17.49■□□□□ 0.39
NPAS3-203ENST00000357798 UBE2WQ96B02 151 aa17.49■□□□□ 0.39
NPAS3-203ENST00000357798 MRPS36P82909 103 aaKnown RBP17.49■□□□□ 0.39
NPAS3-203ENST00000357798 TRAV12-2A0A075B6T6 113 aa17.48■□□□□ 0.39
NPAS3-203ENST00000357798 CRLF1O75462 422 aa17.48■□□□□ 0.39
NPAS3-203ENST00000357798 TEX49A0A1B0GTD5 131 aa17.48■□□□□ 0.39
NPAS3-203ENST00000357798 BEX4Q9NWD9 120 aaPredicted RBP17.48■□□□□ 0.39
NPAS3-203ENST00000357798 H3BUX3 64 aa17.47■□□□□ 0.39
NPAS3-203ENST00000357798 NBL1P41271 181 aa17.47■□□□□ 0.39
NPAS3-203ENST00000357798 ICOSQ9Y6W8 199 aa17.47■□□□□ 0.39
NPAS3-203ENST00000357798 EDA2RQ9HAV5 297 aa17.47■□□□□ 0.39
NPAS3-203ENST00000357798 CD28P10747 220 aa17.46■□□□□ 0.39
NPAS3-203ENST00000357798 CFHR3Q02985 330 aa17.46■□□□□ 0.39
NPAS3-203ENST00000357798 SPXQ9BT56 116 aa17.46■□□□□ 0.39
NPAS3-203ENST00000357798 ZFHX2Q9C0A1 2572 aaPredicted RBP17.46■□□□□ 0.39
NPAS3-203ENST00000357798 BLCAPP62952 87 aa17.46■□□□□ 0.39
NPAS3-203ENST00000357798 SS18L2Q9UHA2 77 aa17.46■□□□□ 0.39
NPAS3-203ENST00000357798 H3BT86 120 aa17.45■□□□□ 0.38
NPAS3-203ENST00000357798 IGHV1-58A0A0C4DH39 117 aa17.45■□□□□ 0.38
NPAS3-203ENST00000357798 IFITM1P13164 125 aa17.45■□□□□ 0.38
NPAS3-203ENST00000357798 SNRPD3P62318 126 aaKnown RBP17.45■□□□□ 0.38
NPAS3-203ENST00000357798 TTC32Q5I0X7 151 aa17.45■□□□□ 0.38
NPAS3-203ENST00000357798 C2orf82Q6UX34 121 aa17.45■□□□□ 0.38
NPAS3-203ENST00000357798 FAM104AQ969W3 186 aa17.45■□□□□ 0.38
NPAS3-203ENST00000357798 ADARB2-AS1A8MUL3 147 aa17.44■□□□□ 0.38
NPAS3-203ENST00000357798 IGKV3-20P01619 116 aa17.44■□□□□ 0.38
NPAS3-203ENST00000357798 SPTBN1Q01082 2364 aaKnown RBP17.44■□□□□ 0.38
NPAS3-203ENST00000357798 TRGV11A0A075B6L2 103 aa17.43■□□□□ 0.38
NPAS3-203ENST00000357798 IGHV4-38-2P0DP08 117 aa17.43■□□□□ 0.38
NPAS3-203ENST00000357798 MIAQ16674 131 aa17.43■□□□□ 0.38
NPAS3-203ENST00000357798 B5MCH6 92 aa17.43■□□□□ 0.38
NPAS3-203ENST00000357798 COX6CP09669 75 aa17.43■□□□□ 0.38
NPAS3-203ENST00000357798 MRPL23Q16540 153 aaKnown RBP17.43■□□□□ 0.38
NPAS3-203ENST00000357798 C15orf53Q8NAA6 179 aa17.43■□□□□ 0.38
NPAS3-203ENST00000357798 NDUFA12Q9UI09 145 aa17.43■□□□□ 0.38
NPAS3-203ENST00000357798 ABCA2Q9BZC7 2435 aa17.42■□□□□ 0.38
NPAS3-203ENST00000357798 H7C423 109 aa17.42■□□□□ 0.38
NPAS3-203ENST00000357798 PRSS2P07478 247 aa17.42■□□□□ 0.38
NPAS3-203ENST00000357798 SPINK13Q1W4C9 94 aa17.42■□□□□ 0.38
NPAS3-203ENST00000357798 MUC6Q6W4X9 2439 aa17.42■□□□□ 0.38
NPAS3-203ENST00000357798 K7EQG2 157 aa17.42■□□□□ 0.38
NPAS3-203ENST00000357798 PTPRZ1P23471 2315 aaPredicted RBP17.42■□□□□ 0.38
NPAS3-203ENST00000357798 ADAMTSL4-AS1Q5T5F5 129 aa17.42■□□□□ 0.38
NPAS3-203ENST00000357798 TRAV8-3A0A0A6YYJ7 113 aa17.41■□□□□ 0.38
NPAS3-203ENST00000357798 ASH1LQ9NR48 2969 aaKnown RBP17.41■□□□□ 0.38
NPAS3-203ENST00000357798 RNF152Q8N8N0 203 aa17.41■□□□□ 0.38
NPAS3-203ENST00000357798 SPTA1P02549 2419 aa17.41■□□□□ 0.38
NPAS3-203ENST00000357798 PRRC2AP48634 2157 aaKnown RBP17.4■□□□□ 0.38
NPAS3-203ENST00000357798 GAGE12JA6NER3 117 aa17.4■□□□□ 0.38
NPAS3-203ENST00000357798 GAGE7O76087 117 aa17.4■□□□□ 0.38
NPAS3-203ENST00000357798 GAGE12FP0CL80 117 aa17.4■□□□□ 0.38
NPAS3-203ENST00000357798 GAGE12GP0CL81 117 aa17.4■□□□□ 0.38
NPAS3-203ENST00000357798 GAGE12IP0CL82 117 aa17.4■□□□□ 0.38
NPAS3-203ENST00000357798 GAGE4Q13068 117 aa17.4■□□□□ 0.38
NPAS3-203ENST00000357798 VSIG2Q96IQ7 327 aa17.4■□□□□ 0.38
NPAS3-203ENST00000357798 TINCRA0A1B0GVN0 87 aa17.39■□□□□ 0.37
NPAS3-203ENST00000357798 YAE1D1Q9NRH1 226 aa17.39■□□□□ 0.37
NPAS3-203ENST00000357798 SVEP1Q4LDE5 3571 aa17.38■□□□□ 0.37
NPAS3-203ENST00000357798 FAM240AA0A1B0GVK7 77 aa17.37■□□□□ 0.37
NPAS3-203ENST00000357798 LST1O00453 97 aa17.37■□□□□ 0.37
NPAS3-203ENST00000357798 DEFB121Q5J5C9 76 aa17.37■□□□□ 0.37
NPAS3-203ENST00000357798 TIMM17BO60830 172 aa17.37■□□□□ 0.37
NPAS3-203ENST00000357798 UCNP55089 124 aa17.37■□□□□ 0.37
NPAS3-203ENST00000357798 TMEM61Q8N0U2 210 aa17.36■□□□□ 0.37
NPAS3-203ENST00000357798 IGHV4-61A0A0C4DH41 118 aa17.36■□□□□ 0.37
NPAS3-203ENST00000357798 SPANXA1Q9NS26 97 aa17.36■□□□□ 0.37
NPAS3-203ENST00000357798 RELNP78509 3460 aa17.35■□□□□ 0.37
NPAS3-203ENST00000357798 CCDC179H3BU77 68 aa17.35■□□□□ 0.37
NPAS3-203ENST00000357798 PSMB8P28062 276 aa17.35■□□□□ 0.37
NPAS3-203ENST00000357798 PIMREGQ9BSJ6 248 aa17.35■□□□□ 0.37
NPAS3-203ENST00000357798 CEMP1Q6PRD7 247 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms