RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 ATP6V0E2Q8NHE4 81 aa10.76□□□□□ -0.69
TRIM13-201ENST00000356017 ZNRF2Q8NHG8 242 aa10.76□□□□□ -0.69
TRIM13-201ENST00000356017 LINC00476Q8WZB0 136 aa10.76□□□□□ -0.69
TRIM13-201ENST00000356017 DNAJC30Q96LL9 226 aa10.76□□□□□ -0.69
TRIM13-201ENST00000356017 SMCO4Q9NRQ5 59 aa10.76□□□□□ -0.69
TRIM13-201ENST00000356017 LY6G6CO95867 125 aa10.76□□□□□ -0.69
TRIM13-201ENST00000356017 RAB4AP20338 218 aa10.76□□□□□ -0.69
TRIM13-201ENST00000356017 ESRGQ1W209 222 aa10.76□□□□□ -0.69
TRIM13-201ENST00000356017 FAM104BQ5XKR9 115 aa10.76□□□□□ -0.69
TRIM13-201ENST00000356017 AMN1Q8IY45 258 aa10.76□□□□□ -0.69
TRIM13-201ENST00000356017 GATD1Q8NB37 220 aa10.76□□□□□ -0.69
TRIM13-201ENST00000356017 NEXN-AS1Q8NBZ9 246 aa10.76□□□□□ -0.69
TRIM13-201ENST00000356017 MRAP2Q96G30 205 aa10.76□□□□□ -0.69
TRIM13-201ENST00000356017 NIT2Q9NQR4 276 aa10.76□□□□□ -0.69
TRIM13-201ENST00000356017 Q9UF83 564 aa10.76□□□□□ -0.69
TRIM13-201ENST00000356017 TNFRSF18Q9Y5U5 241 aa10.76□□□□□ -0.69
TRIM13-201ENST00000356017 URGCP-MRPS24S4R325 110 aa10.76□□□□□ -0.69
TRIM13-201ENST00000356017 TENM2Q9NT68 2774 aa10.75□□□□□ -0.69
TRIM13-201ENST00000356017 COLCA2A8K830 154 aa10.75□□□□□ -0.69
TRIM13-201ENST00000356017 LINC00694P0DN24 101 aa10.75□□□□□ -0.69
TRIM13-201ENST00000356017 TIRAPP58753 221 aa10.75□□□□□ -0.69
TRIM13-201ENST00000356017 LYPD5Q6UWN5 251 aa10.75□□□□□ -0.69
TRIM13-201ENST00000356017 RNF185Q96GF1 192 aa10.75□□□□□ -0.69
TRIM13-201ENST00000356017 GTSF1LQ9H1H1 148 aa10.74□□□□□ -0.69
TRIM13-201ENST00000356017 TRAV26-2A0A0B4J265 109 aa10.73□□□□□ -0.69
TRIM13-201ENST00000356017 LCE6AA0A183 80 aa10.73□□□□□ -0.69
TRIM13-201ENST00000356017 PPP1R17O96001 155 aa10.73□□□□□ -0.69
TRIM13-201ENST00000356017 UBE2D3P61077 147 aa10.73□□□□□ -0.69
TRIM13-201ENST00000356017 UBE2D2P62837 147 aa10.73□□□□□ -0.69
TRIM13-201ENST00000356017 LINC00588Q9Y4M8 146 aa10.73□□□□□ -0.69
TRIM13-201ENST00000356017 DAZ4Q86SG3 579 aaKnown RBP10.73□□□□□ -0.69
TRIM13-201ENST00000356017 YPEL4Q96NS1 127 aa10.73□□□□□ -0.69
TRIM13-201ENST00000356017 DAZ3Q9NR90 486 aaKnown RBP10.73□□□□□ -0.69
TRIM13-201ENST00000356017 MRPS16Q9Y3D3 137 aaKnown RBP10.73□□□□□ -0.69
TRIM13-201ENST00000356017 PLECQ15149 4684 aaKnown RBP10.72□□□□□ -0.69
TRIM13-201ENST00000356017 LOC105371267A0A1B0GV96 52 aa10.72□□□□□ -0.69
TRIM13-201ENST00000356017 COX19Q49B96 90 aa10.72□□□□□ -0.69
TRIM13-201ENST00000356017 UPK3BQ9BT76 320 aa10.72□□□□□ -0.69
TRIM13-201ENST00000356017 PPBPP02775 128 aa10.71□□□□□ -0.69
TRIM13-201ENST00000356017 MRPL51Q4U2R6 128 aaKnown RBP10.71□□□□□ -0.69
TRIM13-201ENST00000356017 CKS2P33552 79 aa10.7□□□□□ -0.7
TRIM13-201ENST00000356017 TMEM97Q5BJF2 176 aa10.7□□□□□ -0.7
TRIM13-201ENST00000356017 OR10J3Q5JRS4 329 aa10.7□□□□□ -0.7
TRIM13-201ENST00000356017 TRBV6-5A0A0K0K1A5 114 aa10.69□□□□□ -0.7
TRIM13-201ENST00000356017 ELOBQ15370 118 aa10.69□□□□□ -0.7
TRIM13-201ENST00000356017 LELP1Q5T871 98 aa10.69□□□□□ -0.7
TRIM13-201ENST00000356017 RPL39LQ96EH5 51 aaKnown RBP10.69□□□□□ -0.7
TRIM13-201ENST00000356017 TRAV8-6A0A0B4J262 113 aa10.69□□□□□ -0.7
TRIM13-201ENST00000356017 GNB1LQ9BYB4 327 aa10.69□□□□□ -0.7
TRIM13-201ENST00000356017 TRBV24-1A0A075B6N3 115 aa10.68□□□□□ -0.7
TRIM13-201ENST00000356017 HLA-DQA1P01909 254 aa10.68□□□□□ -0.7
TRIM13-201ENST00000356017 TMEM136Q6ZRR5 245 aa10.68□□□□□ -0.7
TRIM13-201ENST00000356017 ORMDL3Q8N138 153 aa10.68□□□□□ -0.7
TRIM13-201ENST00000356017 ST20Q9HBF5 79 aa10.68□□□□□ -0.7
TRIM13-201ENST00000356017 SDHAF1A6NFY7 115 aa10.67□□□□□ -0.7
TRIM13-201ENST00000356017 D6R8Y8 96 aa10.67□□□□□ -0.7
TRIM13-201ENST00000356017 NCR2O95944 276 aa10.67□□□□□ -0.7
TRIM13-201ENST00000356017 MT-ND6P03923 174 aa10.67□□□□□ -0.7
TRIM13-201ENST00000356017 Q9H8V8 135 aa10.67□□□□□ -0.7
TRIM13-201ENST00000356017 IGHV3-38A0A0C4DH36 116 aa10.66□□□□□ -0.7
TRIM13-201ENST00000356017 SMKR1H3BMG3 65 aa10.66□□□□□ -0.7
TRIM13-201ENST00000356017 GAS8-AS1O95177 125 aa10.66□□□□□ -0.7
TRIM13-201ENST00000356017 RPS10P46783 165 aaKnown RBP10.66□□□□□ -0.7
TRIM13-201ENST00000356017 TRBV6-8A0A0A6YYG3 113 aa10.66□□□□□ -0.7
TRIM13-201ENST00000356017 TGIF2-C20orf24A0A0A6YYL0 155 aa10.66□□□□□ -0.7
TRIM13-201ENST00000356017 PHOX2AO14813 284 aa10.66□□□□□ -0.7
TRIM13-201ENST00000356017 SIVA1O15304 175 aa10.66□□□□□ -0.7
TRIM13-201ENST00000356017 NRACQ8N912 160 aa10.66□□□□□ -0.7
TRIM13-201ENST00000356017 C20orf78Q9BR46 151 aa10.66□□□□□ -0.7
TRIM13-201ENST00000356017 LAMTOR2Q9Y2Q5 125 aa10.66□□□□□ -0.7
TRIM13-201ENST00000356017 LYSTQ99698 3801 aa10.65□□□□□ -0.7
TRIM13-201ENST00000356017 APCSP02743 223 aa10.65□□□□□ -0.7
TRIM13-201ENST00000356017 RAB5AP20339 215 aa10.65□□□□□ -0.7
TRIM13-201ENST00000356017 SUMO2P61956 95 aaKnown RBP10.65□□□□□ -0.7
TRIM13-201ENST00000356017 COTL1Q14019 142 aa10.65□□□□□ -0.7
TRIM13-201ENST00000356017 TMEM70Q9BUB7 260 aa10.65□□□□□ -0.7
TRIM13-201ENST00000356017 I3L3M4 83 aa10.64□□□□□ -0.71
TRIM13-201ENST00000356017 TNFRSF6BO95407 300 aa10.64□□□□□ -0.71
TRIM13-201ENST00000356017 POLR2KP53803 58 aaKnown RBP10.64□□□□□ -0.71
TRIM13-201ENST00000356017 PRELID3AQ96N28 172 aa10.64□□□□□ -0.71
TRIM13-201ENST00000356017 TRBV25-1A0A075B6N4 114 aa10.63□□□□□ -0.71
TRIM13-201ENST00000356017 TRBV27A0A0K0K1C4 114 aa10.63□□□□□ -0.71
TRIM13-201ENST00000356017 K7EP13 123 aa10.63□□□□□ -0.71
TRIM13-201ENST00000356017 VCYO14598 125 aa10.63□□□□□ -0.71
TRIM13-201ENST00000356017 PMCHP20382 165 aa10.63□□□□□ -0.71
TRIM13-201ENST00000356017 WFDC10BQ8IUB3 73 aa10.63□□□□□ -0.71
TRIM13-201ENST00000356017 ALMS1Q8TCU4 4167 aa10.62□□□□□ -0.71
TRIM13-201ENST00000356017 IGHV1-24A0A0C4DH33 117 aa10.62□□□□□ -0.71
TRIM13-201ENST00000356017 TRAV9-2A0A087WT02 112 aa10.62□□□□□ -0.71
TRIM13-201ENST00000356017 DNAH10OSP0CZ25 163 aa10.62□□□□□ -0.71
TRIM13-201ENST00000356017 PKIAP61925 76 aa10.62□□□□□ -0.71
TRIM13-201ENST00000356017 RPL32P62910 135 aaKnown RBP10.62□□□□□ -0.71
TRIM13-201ENST00000356017 IQCJQ1A5X6 159 aa10.62□□□□□ -0.71
TRIM13-201ENST00000356017 TTC32Q5I0X7 151 aa10.62□□□□□ -0.71
TRIM13-201ENST00000356017 NTM-AS1Q6ZSK4 140 aa10.62□□□□□ -0.71
TRIM13-201ENST00000356017 KIR2DL4Q99706 377 aa10.62□□□□□ -0.71
TRIM13-201ENST00000356017 IGLV2-18A0A075B6J9 118 aa10.61□□□□□ -0.71
TRIM13-201ENST00000356017 NPYP01303 97 aa10.61□□□□□ -0.71
TRIM13-201ENST00000356017 MRPL18Q9H0U6 180 aaKnown RBP10.61□□□□□ -0.71
TRIM13-201ENST00000356017 TRAPPC1Q9Y5R8 145 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms