RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 MYO18BQ8IUG5 2567 aa7.09□□□□□ -1.28
SMG6-202ENST00000354901 C19orf84I3L1E1 186 aa7.08□□□□□ -1.28
SMG6-202ENST00000354901 TRBV12-3P01733 135 aa7.08□□□□□ -1.28
SMG6-202ENST00000354901 TSPEAR-AS2P59090 65 aa7.08□□□□□ -1.28
SMG6-202ENST00000354901 Q6ZSV7 163 aa7.08□□□□□ -1.28
SMG6-202ENST00000354901 BAALCQ8WXS3 180 aa7.08□□□□□ -1.28
SMG6-202ENST00000354901 NOTCH3Q9UM47 2321 aa7.08□□□□□ -1.28
SMG6-202ENST00000354901 S100A4P26447 101 aaKnown RBP7.08□□□□□ -1.28
SMG6-202ENST00000354901 LMO4P61968 165 aa7.08□□□□□ -1.28
SMG6-202ENST00000354901 C4orf26Q17RF5 130 aa7.08□□□□□ -1.28
SMG6-202ENST00000354901 ITLN2Q8WWU7 325 aaPredicted RBP7.08□□□□□ -1.28
SMG6-202ENST00000354901 NSUN5P1Q3KNT7 163 aa7.08□□□□□ -1.28
SMG6-202ENST00000354901 MDFICQ9P1T7 246 aa7.08□□□□□ -1.28
SMG6-202ENST00000354901 ZFYVE26Q68DK2 2539 aa7.08□□□□□ -1.28
SMG6-202ENST00000354901 hADV29S1A0JD25 119 aa7.07□□□□□ -1.28
SMG6-202ENST00000354901 SMIM2Q9BVW6 85 aa7.07□□□□□ -1.28
SMG6-202ENST00000354901 ITPR1Q14643 2758 aa7.07□□□□□ -1.28
SMG6-202ENST00000354901 FLNCQ14315 2725 aa7.07□□□□□ -1.28
SMG6-202ENST00000354901 LGALS9O00182 355 aa7.07□□□□□ -1.28
SMG6-202ENST00000354901 UNQ9165/PRO28630Q6UXU0 137 aa7.07□□□□□ -1.28
SMG6-202ENST00000354901 MUSTN1Q8IVN3 82 aa7.07□□□□□ -1.28
SMG6-202ENST00000354901 SLC50A1Q9BRV3 221 aa7.07□□□□□ -1.28
SMG6-202ENST00000354901 CELSR2Q9HCU4 2923 aa7.07□□□□□ -1.28
SMG6-202ENST00000354901 F6UB75 175 aa7.07□□□□□ -1.28
SMG6-202ENST00000354901 USP9XQ93008 2570 aaPredicted RBP7.07□□□□□ -1.28
SMG6-202ENST00000354901 IGHV3-30P01768 117 aa7.06□□□□□ -1.28
SMG6-202ENST00000354901 IGHV3-33P01772 117 aa7.06□□□□□ -1.28
SMG6-202ENST00000354901 IGHV3-30-5P0DP03 117 aa7.06□□□□□ -1.28
SMG6-202ENST00000354901 RPL39P62891 51 aaKnown RBP7.06□□□□□ -1.28
SMG6-202ENST00000354901 PRR9Q5T870 116 aa7.06□□□□□ -1.28
SMG6-202ENST00000354901 IGLV2-18A0A075B6J9 118 aa7.06□□□□□ -1.28
SMG6-202ENST00000354901 LINC01559Q495D7 138 aa7.06□□□□□ -1.28
SMG6-202ENST00000354901 C5orf56Q8N8D9 126 aa7.06□□□□□ -1.28
SMG6-202ENST00000354901 PIEZO1Q92508 2521 aa7.06□□□□□ -1.28
SMG6-202ENST00000354901 TRIAP1O43715 76 aa7.06□□□□□ -1.28
SMG6-202ENST00000354901 GNLYP22749 145 aa7.06□□□□□ -1.28
SMG6-202ENST00000354901 NRACQ8N912 160 aa7.06□□□□□ -1.28
SMG6-202ENST00000354901 KIR2DL5BQ8NHK3 375 aa7.06□□□□□ -1.28
SMG6-202ENST00000354901 C20orf173Q96LM9 149 aa7.06□□□□□ -1.28
SMG6-202ENST00000354901 LINC00477Q96M19 166 aa7.06□□□□□ -1.28
SMG6-202ENST00000354901 DSCR8Q96T75 97 aa7.06□□□□□ -1.28
SMG6-202ENST00000354901 NACAE9PAV3 2078 aa7.05□□□□□ -1.28
SMG6-202ENST00000354901 TLN2Q9Y4G6 2542 aa7.05□□□□□ -1.28
SMG6-202ENST00000354901 Q6Q795 121 aa7.05□□□□□ -1.28
SMG6-202ENST00000354901 COX8CQ7Z4L0 72 aa7.05□□□□□ -1.28
SMG6-202ENST00000354901 SBSPONQ8IVN8 264 aa7.05□□□□□ -1.28
SMG6-202ENST00000354901 NEXN-AS1Q8NBZ9 246 aa7.05□□□□□ -1.28
SMG6-202ENST00000354901 TP53TG1Q9Y2A0 90 aa7.05□□□□□ -1.28
SMG6-202ENST00000354901 F5H697 171 aa7.05□□□□□ -1.28
SMG6-202ENST00000354901 UTP20O75691 2785 aaKnown RBP7.05□□□□□ -1.28
SMG6-202ENST00000354901 SUMO2P61956 95 aaKnown RBP7.05□□□□□ -1.28
SMG6-202ENST00000354901 C3orf22Q8N5N4 141 aa7.05□□□□□ -1.28
SMG6-202ENST00000354901 A0A0U1RRA0 63 aa7.04□□□□□ -1.28
SMG6-202ENST00000354901 LRRC75A-AS1Q8N1F1 130 aa7.04□□□□□ -1.28
SMG6-202ENST00000354901 TMEM190Q8WZ59 177 aa7.04□□□□□ -1.28
SMG6-202ENST00000354901 OPRPNQ99935 248 aaPredicted RBP7.04□□□□□ -1.28
SMG6-202ENST00000354901 TRBV7-1A0A0A6YYK4 115 aa7.04□□□□□ -1.28
SMG6-202ENST00000354901 TRBV10-2A0A0K0K1G8 114 aa7.04□□□□□ -1.28
SMG6-202ENST00000354901 J3QQQ9 107 aa7.04□□□□□ -1.28
SMG6-202ENST00000354901 TRACP01848 142 aa7.04□□□□□ -1.28
SMG6-202ENST00000354901 IGHV4-38-2P0DP08 117 aa7.04□□□□□ -1.28
SMG6-202ENST00000354901 EDN2P20800 178 aa7.04□□□□□ -1.28
SMG6-202ENST00000354901 ORMDL2Q53FV1 153 aa7.04□□□□□ -1.28
SMG6-202ENST00000354901 TRAV13-1A0A0B4J241 112 aa7.04□□□□□ -1.28
SMG6-202ENST00000354901 IGHV7-4-1A0A0J9YVY3 117 aa7.04□□□□□ -1.28
SMG6-202ENST00000354901 RNF152Q8N8N0 203 aa7.04□□□□□ -1.28
SMG6-202ENST00000354901 ZNF580Q9UK33 172 aa7.04□□□□□ -1.28
SMG6-202ENST00000354901 CFAP46Q8IYW2 2715 aa7.04□□□□□ -1.28
SMG6-202ENST00000354901 NOTCH2Q04721 2471 aa7.04□□□□□ -1.28
SMG6-202ENST00000354901 IGHV4-61A0A0C4DH41 118 aa7.03□□□□□ -1.28
SMG6-202ENST00000354901 A0A0U1RQV1 116 aa7.03□□□□□ -1.28
SMG6-202ENST00000354901 BLCAPP62952 87 aa7.03□□□□□ -1.28
SMG6-202ENST00000354901 ZANQ9Y493 2812 aa7.03□□□□□ -1.28
SMG6-202ENST00000354901 H3BUX3 64 aa7.03□□□□□ -1.28
SMG6-202ENST00000354901 RPL35AP18077 110 aaKnown RBP7.03□□□□□ -1.28
SMG6-202ENST00000354901 RNASE4P34096 147 aaKnown RBP7.03□□□□□ -1.28
SMG6-202ENST00000354901 ZNF415Q09FC8 603 aa7.03□□□□□ -1.28
SMG6-202ENST00000354901 CNFNQ9BYD5 112 aa7.03□□□□□ -1.28
SMG6-202ENST00000354901 MOB4Q9Y3A3 225 aa7.03□□□□□ -1.28
SMG6-202ENST00000354901 EIF4EBP3O60516 100 aaPredicted RBP7.03□□□□□ -1.28
SMG6-202ENST00000354901 MYO9AB2RTY4 2548 aa7.03□□□□□ -1.28
SMG6-202ENST00000354901 TRAV12-1A0A0B4J245 112 aa7.02□□□□□ -1.29
SMG6-202ENST00000354901 J3QLI3 93 aa7.02□□□□□ -1.29
SMG6-202ENST00000354901 M0R2P5 195 aa7.02□□□□□ -1.29
SMG6-202ENST00000354901 COX6B1P14854 86 aa7.02□□□□□ -1.29
SMG6-202ENST00000354901 H7C423 109 aa7.02□□□□□ -1.29
SMG6-202ENST00000354901 SEC61GP60059 68 aa7.02□□□□□ -1.29
SMG6-202ENST00000354901 UQCRQO14949 82 aa7.02□□□□□ -1.29
SMG6-202ENST00000354901 GNRH2O43555 120 aa7.02□□□□□ -1.29
SMG6-202ENST00000354901 COX6CP09669 75 aa7.02□□□□□ -1.29
SMG6-202ENST00000354901 SLC25A29Q8N8R3 303 aa7.02□□□□□ -1.29
SMG6-202ENST00000354901 DAND5Q8N907 189 aa7.02□□□□□ -1.29
SMG6-202ENST00000354901 TOMM6Q96B49 74 aa7.02□□□□□ -1.29
SMG6-202ENST00000354901 PHLDA3Q9Y5J5 127 aa7.02□□□□□ -1.29
SMG6-202ENST00000354901 IGHV1-69DA0A0B4J2H0 117 aa7.01□□□□□ -1.29
SMG6-202ENST00000354901 LINC01619G3V211 115 aa7.01□□□□□ -1.29
SMG6-202ENST00000354901 IGKV3-20P01619 116 aa7.01□□□□□ -1.29
SMG6-202ENST00000354901 IGHV1-69P01742 117 aa7.01□□□□□ -1.29
SMG6-202ENST00000354901 FAM74A4Q5TZK3 123 aa7.01□□□□□ -1.29
SMG6-202ENST00000354901 C9orf47Q6ZRZ4 202 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms