RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 Q8N1Y9 231 aa8.44□□□□□ -1.06
CAPN9-202ENST00000354537 ANAPC13Q9BS18 74 aa8.44□□□□□ -1.06
CAPN9-202ENST00000354537 SPANXA1Q9NS26 97 aa8.44□□□□□ -1.06
CAPN9-202ENST00000354537 ABCA4P78363 2273 aa8.44□□□□□ -1.06
CAPN9-202ENST00000354537 A0A0J9YXV3 536 aa8.43□□□□□ -1.06
CAPN9-202ENST00000354537 IGHV3OR16-10A0A075B7F0 116 aa8.43□□□□□ -1.06
CAPN9-202ENST00000354537 H3BUX3 64 aa8.43□□□□□ -1.06
CAPN9-202ENST00000354537 K7EQG2 157 aa8.43□□□□□ -1.06
CAPN9-202ENST00000354537 IGHV3-30-3P0DP02 117 aa8.43□□□□□ -1.06
CAPN9-202ENST00000354537 PIK3CD-AS1Q5SR53 167 aa8.43□□□□□ -1.06
CAPN9-202ENST00000354537 BRD3OSQ6XYD6 125 aa8.43□□□□□ -1.06
CAPN9-202ENST00000354537 LITAFQ99732 161 aa8.43□□□□□ -1.06
CAPN9-202ENST00000354537 OPRPNQ99935 248 aaPredicted RBP8.43□□□□□ -1.06
CAPN9-202ENST00000354537 SPTBN4Q9H254 2564 aa8.43□□□□□ -1.06
CAPN9-202ENST00000354537 SNCGO76070 127 aa8.42□□□□□ -1.06
CAPN9-202ENST00000354537 IGHV4-39P01824 125 aa8.42□□□□□ -1.06
CAPN9-202ENST00000354537 GAGE2BQ13066 116 aa8.42□□□□□ -1.06
CAPN9-202ENST00000354537 GAGE5Q13069 117 aa8.42□□□□□ -1.06
CAPN9-202ENST00000354537 GAGE6Q13070 117 aa8.42□□□□□ -1.06
CAPN9-202ENST00000354537 LY6EQ16553 131 aa8.42□□□□□ -1.06
CAPN9-202ENST00000354537 GAGE2EQ4V326 116 aa8.42□□□□□ -1.06
CAPN9-202ENST00000354537 PIMREGQ9BSJ6 248 aa8.42□□□□□ -1.06
CAPN9-202ENST00000354537 TIMM21Q9BVV7 248 aa8.42□□□□□ -1.06
CAPN9-202ENST00000354537 GAGE2DQ9UEU5 116 aa8.42□□□□□ -1.06
CAPN9-202ENST00000354537 IGHV1-58A0A0C4DH39 117 aa8.42□□□□□ -1.06
CAPN9-202ENST00000354537 H3BT86 120 aa8.42□□□□□ -1.06
CAPN9-202ENST00000354537 TIMM17BO60830 172 aa8.42□□□□□ -1.06
CAPN9-202ENST00000354537 BLCAPP62952 87 aa8.42□□□□□ -1.06
CAPN9-202ENST00000354537 Q1RN00 199 aa8.42□□□□□ -1.06
CAPN9-202ENST00000354537 NTN5Q8WTR8 489 aaPredicted RBP8.42□□□□□ -1.06
CAPN9-202ENST00000354537 YAE1D1Q9NRH1 226 aa8.42□□□□□ -1.06
CAPN9-202ENST00000354537 TGFAP01135 160 aa8.41□□□□□ -1.06
CAPN9-202ENST00000354537 COX6CP09669 75 aa8.41□□□□□ -1.06
CAPN9-202ENST00000354537 TACC2O95359 2948 aa8.41□□□□□ -1.06
CAPN9-202ENST00000354537 TINCRA0A1B0GVN0 87 aa8.41□□□□□ -1.06
CAPN9-202ENST00000354537 TRAV8-4A0A0B4J246 113 aa8.4□□□□□ -1.06
CAPN9-202ENST00000354537 TRIAP1O43715 76 aa8.4□□□□□ -1.06
CAPN9-202ENST00000354537 IGHV4-38-2P0DP08 117 aa8.4□□□□□ -1.06
CAPN9-202ENST00000354537 IFITM1P13164 125 aa8.4□□□□□ -1.06
CAPN9-202ENST00000354537 PSMB8P28062 276 aa8.4□□□□□ -1.06
CAPN9-202ENST00000354537 MIAQ16674 131 aa8.4□□□□□ -1.06
CAPN9-202ENST00000354537 WFDC12Q8WWY7 111 aa8.4□□□□□ -1.06
CAPN9-202ENST00000354537 H3BMM0 161 aa8.4□□□□□ -1.07
CAPN9-202ENST00000354537 CD28P10747 220 aa8.4□□□□□ -1.07
CAPN9-202ENST00000354537 DEFB121Q5J5C9 76 aa8.4□□□□□ -1.07
CAPN9-202ENST00000354537 DEFB104AQ8WTQ1 72 aa8.4□□□□□ -1.07
CAPN9-202ENST00000354537 FAM104AQ969W3 186 aa8.4□□□□□ -1.07
CAPN9-202ENST00000354537 UBE2WQ96B02 151 aa8.4□□□□□ -1.07
CAPN9-202ENST00000354537 FAM240AA0A1B0GVK7 77 aa8.39□□□□□ -1.07
CAPN9-202ENST00000354537 C10orf105Q8TEF2 133 aa8.39□□□□□ -1.07
CAPN9-202ENST00000354537 ICOSQ9Y6W8 199 aa8.39□□□□□ -1.07
CAPN9-202ENST00000354537 IGHV4-61A0A0C4DH41 118 aa8.39□□□□□ -1.07
CAPN9-202ENST00000354537 H7C2G1 150 aa8.39□□□□□ -1.07
CAPN9-202ENST00000354537 VSIG2Q96IQ7 327 aa8.39□□□□□ -1.07
CAPN9-202ENST00000354537 SPXQ9BT56 116 aa8.39□□□□□ -1.07
CAPN9-202ENST00000354537 TRAV12-2A0A075B6T6 113 aa8.38□□□□□ -1.07
CAPN9-202ENST00000354537 ELANEP08246 267 aa8.38□□□□□ -1.07
CAPN9-202ENST00000354537 EDN2P20800 178 aa8.38□□□□□ -1.07
CAPN9-202ENST00000354537 NDUFV3P56181 108 aaKnown RBP8.38□□□□□ -1.07
CAPN9-202ENST00000354537 NDUFA12Q9UI09 145 aa8.38□□□□□ -1.07
CAPN9-202ENST00000354537 IGHV3-64A0A075B6Q5 118 aa8.38□□□□□ -1.07
CAPN9-202ENST00000354537 NHLRC4P0CG21 123 aaPredicted RBP8.38□□□□□ -1.07
CAPN9-202ENST00000354537 C2orf82Q6UX34 121 aa8.38□□□□□ -1.07
CAPN9-202ENST00000354537 TLN1Q9Y490 2541 aaKnown RBP8.38□□□□□ -1.07
CAPN9-202ENST00000354537 A8MTW9 85 aa8.37□□□□□ -1.07
CAPN9-202ENST00000354537 SPINK13Q1W4C9 94 aa8.37□□□□□ -1.07
CAPN9-202ENST00000354537 DNAJC30Q96LL9 226 aa8.37□□□□□ -1.07
CAPN9-202ENST00000354537 TNFRSF18Q9Y5U5 241 aa8.37□□□□□ -1.07
CAPN9-202ENST00000354537 DCHS2Q6V1P9 2916 aa8.37□□□□□ -1.07
CAPN9-202ENST00000354537 HRNRQ86YZ3 2850 aaPredicted RBP8.37□□□□□ -1.07
CAPN9-202ENST00000354537 TTC32Q5I0X7 151 aa8.37□□□□□ -1.07
CAPN9-202ENST00000354537 TRAV4A0A0B4J268 109 aa8.36□□□□□ -1.07
CAPN9-202ENST00000354537 H7C423 109 aa8.36□□□□□ -1.07
CAPN9-202ENST00000354537 LST1O00453 97 aa8.36□□□□□ -1.07
CAPN9-202ENST00000354537 TEX49A0A1B0GTD5 131 aa8.36□□□□□ -1.07
CAPN9-202ENST00000354537 PRSS2P07478 247 aa8.36□□□□□ -1.07
CAPN9-202ENST00000354537 TIRAPP58753 221 aa8.36□□□□□ -1.07
CAPN9-202ENST00000354537 ADAMTSL4-AS1Q5T5F5 129 aa8.36□□□□□ -1.07
CAPN9-202ENST00000354537 TMEM61Q8N0U2 210 aa8.36□□□□□ -1.07
CAPN9-202ENST00000354537 ATMQ13315 3056 aa8.35□□□□□ -1.07
CAPN9-202ENST00000354537 GAGE12JA6NER3 117 aa8.35□□□□□ -1.07
CAPN9-202ENST00000354537 GAGE7O76087 117 aa8.35□□□□□ -1.07
CAPN9-202ENST00000354537 MSMBP08118 114 aa8.35□□□□□ -1.07
CAPN9-202ENST00000354537 GAGE12FP0CL80 117 aa8.35□□□□□ -1.07
CAPN9-202ENST00000354537 GAGE12GP0CL81 117 aa8.35□□□□□ -1.07
CAPN9-202ENST00000354537 GAGE12IP0CL82 117 aa8.35□□□□□ -1.07
CAPN9-202ENST00000354537 GAGE4Q13068 117 aa8.35□□□□□ -1.07
CAPN9-202ENST00000354537 CHCHD7Q9BUK0 85 aa8.35□□□□□ -1.07
CAPN9-202ENST00000354537 UBE2D4Q9Y2X8 147 aa8.35□□□□□ -1.07
CAPN9-202ENST00000354537 PTPRQQ9UMZ3 2332 aa8.35□□□□□ -1.07
CAPN9-202ENST00000354537 LRBAP50851 2863 aa8.35□□□□□ -1.07
CAPN9-202ENST00000354537 IGLV5-45A0A087WSX0 123 aa8.35□□□□□ -1.07
CAPN9-202ENST00000354537 IGKV3-20P01619 116 aa8.35□□□□□ -1.07
CAPN9-202ENST00000354537 GATA3P23771 443 aa8.35□□□□□ -1.07
CAPN9-202ENST00000354537 C15orf53Q8NAA6 179 aa8.35□□□□□ -1.07
CAPN9-202ENST00000354537 LINC00467Q9BRT7 94 aa8.35□□□□□ -1.07
CAPN9-202ENST00000354537 CRLF1O75462 422 aa8.34□□□□□ -1.07
CAPN9-202ENST00000354537 PRORYQ9H606 182 aa8.34□□□□□ -1.07
CAPN9-202ENST00000354537 BEX4Q9NWD9 120 aaPredicted RBP8.34□□□□□ -1.07
CAPN9-202ENST00000354537 TRAV8-3A0A0A6YYJ7 113 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms