RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 BRD3OSQ6XYD6 125 aa7.51□□□□□ -1.21
TRAPPC6B-202ENST00000347691 ASPMQ8IZT6 3477 aa7.51□□□□□ -1.21
TRAPPC6B-202ENST00000347691 BSNQ9UPA5 3926 aa7.51□□□□□ -1.21
TRAPPC6B-202ENST00000347691 IGLV4-3A0A075B6K6 122 aa7.51□□□□□ -1.21
TRAPPC6B-202ENST00000347691 TMEM89A2RUT3 159 aa7.51□□□□□ -1.21
TRAPPC6B-202ENST00000347691 RPL13AP40429 203 aaKnown RBP7.51□□□□□ -1.21
TRAPPC6B-202ENST00000347691 TIMM21Q9BVV7 248 aa7.51□□□□□ -1.21
TRAPPC6B-202ENST00000347691 A0A0J9YXY3 114 aa7.5□□□□□ -1.21
TRAPPC6B-202ENST00000347691 TGFAP01135 160 aa7.5□□□□□ -1.21
TRAPPC6B-202ENST00000347691 Q8N1Y9 231 aa7.5□□□□□ -1.21
TRAPPC6B-202ENST00000347691 YAE1D1Q9NRH1 226 aa7.5□□□□□ -1.21
TRAPPC6B-202ENST00000347691 SPANXA1Q9NS26 97 aa7.5□□□□□ -1.21
TRAPPC6B-202ENST00000347691 TRBV10-2A0A0K0K1G8 114 aa7.5□□□□□ -1.21
TRAPPC6B-202ENST00000347691 CFHR3Q02985 330 aa7.5□□□□□ -1.21
TRAPPC6B-202ENST00000347691 RNF152Q8N8N0 203 aa7.5□□□□□ -1.21
TRAPPC6B-202ENST00000347691 RNF183Q96D59 192 aa7.5□□□□□ -1.21
TRAPPC6B-202ENST00000347691 Q6Q795 121 aa7.5□□□□□ -1.21
TRAPPC6B-202ENST00000347691 CITED1Q99966 193 aa7.5□□□□□ -1.21
TRAPPC6B-202ENST00000347691 SPANXDQ9BXN6 97 aa7.5□□□□□ -1.21
TRAPPC6B-202ENST00000347691 SPANXCQ9NY87 97 aa7.5□□□□□ -1.21
TRAPPC6B-202ENST00000347691 SPTA1P02549 2419 aa7.49□□□□□ -1.21
TRAPPC6B-202ENST00000347691 A0A0J9YXV3 536 aa7.49□□□□□ -1.21
TRAPPC6B-202ENST00000347691 CD28P10747 220 aa7.49□□□□□ -1.21
TRAPPC6B-202ENST00000347691 GAGE2BQ13066 116 aa7.49□□□□□ -1.21
TRAPPC6B-202ENST00000347691 GAGE2EQ4V326 116 aa7.49□□□□□ -1.21
TRAPPC6B-202ENST00000347691 GAGE2DQ9UEU5 116 aa7.49□□□□□ -1.21
TRAPPC6B-202ENST00000347691 NCOR2Q9Y618 2525 aa7.49□□□□□ -1.21
TRAPPC6B-202ENST00000347691 IGHV4-39P01824 125 aa7.49□□□□□ -1.21
TRAPPC6B-202ENST00000347691 MRPS36P82909 103 aaKnown RBP7.49□□□□□ -1.21
TRAPPC6B-202ENST00000347691 TRAV8-4A0A0B4J246 113 aa7.48□□□□□ -1.21
TRAPPC6B-202ENST00000347691 H3BT86 120 aa7.48□□□□□ -1.21
TRAPPC6B-202ENST00000347691 H7C2G1 150 aa7.48□□□□□ -1.21
TRAPPC6B-202ENST00000347691 IGHV3-30-3P0DP02 117 aa7.48□□□□□ -1.21
TRAPPC6B-202ENST00000347691 MRPL23Q16540 153 aaKnown RBP7.48□□□□□ -1.21
TRAPPC6B-202ENST00000347691 CACNA1AO00555 2505 aa7.48□□□□□ -1.21
TRAPPC6B-202ENST00000347691 MED13LQ71F56 2210 aa7.48□□□□□ -1.21
TRAPPC6B-202ENST00000347691 H3BMM0 161 aa7.48□□□□□ -1.21
TRAPPC6B-202ENST00000347691 K7EQG2 157 aa7.48□□□□□ -1.21
TRAPPC6B-202ENST00000347691 NTN5Q8WTR8 489 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC6B-202ENST00000347691 UBE2WQ96B02 151 aa7.48□□□□□ -1.21
TRAPPC6B-202ENST00000347691 IGHV1-58A0A0C4DH39 117 aa7.48□□□□□ -1.21
TRAPPC6B-202ENST00000347691 PIK3CD-AS1Q5SR53 167 aa7.48□□□□□ -1.21
TRAPPC6B-202ENST00000347691 DEFB104AQ8WTQ1 72 aa7.48□□□□□ -1.21
TRAPPC6B-202ENST00000347691 OPRPNQ99935 248 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC6B-202ENST00000347691 IGHV4-38-2P0DP08 117 aa7.47□□□□□ -1.21
TRAPPC6B-202ENST00000347691 BLCAPP62952 87 aa7.47□□□□□ -1.21
TRAPPC6B-202ENST00000347691 GAGE5Q13069 117 aa7.47□□□□□ -1.21
TRAPPC6B-202ENST00000347691 GAGE6Q13070 117 aa7.47□□□□□ -1.21
TRAPPC6B-202ENST00000347691 ATMQ13315 3056 aa7.47□□□□□ -1.21
TRAPPC6B-202ENST00000347691 LRBAP50851 2863 aa7.47□□□□□ -1.21
TRAPPC6B-202ENST00000347691 TINCRA0A1B0GVN0 87 aa7.47□□□□□ -1.21
TRAPPC6B-202ENST00000347691 TIMM17BO60830 172 aa7.47□□□□□ -1.21
TRAPPC6B-202ENST00000347691 IFITM1P13164 125 aa7.47□□□□□ -1.21
TRAPPC6B-202ENST00000347691 SPTBN1Q01082 2364 aaKnown RBP7.47□□□□□ -1.21
TRAPPC6B-202ENST00000347691 IGHV3-64A0A075B6Q5 118 aa7.46□□□□□ -1.21
TRAPPC6B-202ENST00000347691 TRAV12-2A0A075B6T6 113 aa7.46□□□□□ -1.21
TRAPPC6B-202ENST00000347691 MIAQ16674 131 aa7.46□□□□□ -1.21
TRAPPC6B-202ENST00000347691 SPXQ9BT56 116 aa7.46□□□□□ -1.21
TRAPPC6B-202ENST00000347691 NDUFA12Q9UI09 145 aa7.46□□□□□ -1.21
TRAPPC6B-202ENST00000347691 TNFRSF18Q9Y5U5 241 aa7.46□□□□□ -1.21
TRAPPC6B-202ENST00000347691 ICOSQ9Y6W8 199 aa7.46□□□□□ -1.21
TRAPPC6B-202ENST00000347691 EIF4EBP3O60516 100 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC6B-202ENST00000347691 PSMB8P28062 276 aa7.46□□□□□ -1.22
TRAPPC6B-202ENST00000347691 HERV-K104P63124 156 aa7.46□□□□□ -1.22
TRAPPC6B-202ENST00000347691 TTC32Q5I0X7 151 aa7.46□□□□□ -1.22
TRAPPC6B-202ENST00000347691 C10orf105Q8TEF2 133 aa7.46□□□□□ -1.22
TRAPPC6B-202ENST00000347691 TRIAP1O43715 76 aa7.46□□□□□ -1.22
TRAPPC6B-202ENST00000347691 SPINK13Q1W4C9 94 aa7.46□□□□□ -1.22
TRAPPC6B-202ENST00000347691 C2orf82Q6UX34 121 aa7.46□□□□□ -1.22
TRAPPC6B-202ENST00000347691 HRNRQ86YZ3 2850 aaPredicted RBP7.45□□□□□ -1.22
TRAPPC6B-202ENST00000347691 IGHV4-61A0A0C4DH41 118 aa7.45□□□□□ -1.22
TRAPPC6B-202ENST00000347691 PRSS2P07478 247 aa7.45□□□□□ -1.22
TRAPPC6B-202ENST00000347691 COPS9Q8WXC6 57 aa7.45□□□□□ -1.22
TRAPPC6B-202ENST00000347691 LITAFQ99732 161 aa7.45□□□□□ -1.22
TRAPPC6B-202ENST00000347691 DCHS2Q6V1P9 2916 aa7.45□□□□□ -1.22
TRAPPC6B-202ENST00000347691 IGKV3-20P01619 116 aa7.45□□□□□ -1.22
TRAPPC6B-202ENST00000347691 FAM240AA0A1B0GVK7 77 aa7.44□□□□□ -1.22
TRAPPC6B-202ENST00000347691 MSMBP08118 114 aa7.44□□□□□ -1.22
TRAPPC6B-202ENST00000347691 GATA3P23771 443 aa7.44□□□□□ -1.22
TRAPPC6B-202ENST00000347691 VSIG2Q96IQ7 327 aa7.44□□□□□ -1.22
TRAPPC6B-202ENST00000347691 EPG5Q9HCE0 2579 aa7.44□□□□□ -1.22
TRAPPC6B-202ENST00000347691 BEX4Q9NWD9 120 aaPredicted RBP7.44□□□□□ -1.22
TRAPPC6B-202ENST00000347691 CHD8Q9HCK8 2581 aa7.44□□□□□ -1.22
TRAPPC6B-202ENST00000347691 NDUFV3P56181 108 aaKnown RBP7.44□□□□□ -1.22
TRAPPC6B-202ENST00000347691 DNAJC30Q96LL9 226 aa7.44□□□□□ -1.22
TRAPPC6B-202ENST00000347691 CIRBPQ14011 172 aaKnown RBP7.43□□□□□ -1.22
TRAPPC6B-202ENST00000347691 CCL19Q99731 98 aa7.43□□□□□ -1.22
TRAPPC6B-202ENST00000347691 LAMA5O15230 3695 aa7.43□□□□□ -1.22
TRAPPC6B-202ENST00000347691 EDN2P20800 178 aa7.42□□□□□ -1.22
TRAPPC6B-202ENST00000347691 ZNF415Q09FC8 603 aa7.42□□□□□ -1.22
TRAPPC6B-202ENST00000347691 TEX49A0A1B0GTD5 131 aa7.42□□□□□ -1.22
TRAPPC6B-202ENST00000347691 LST1O00453 97 aa7.42□□□□□ -1.22
TRAPPC6B-202ENST00000347691 TMEM61Q8N0U2 210 aa7.42□□□□□ -1.22
TRAPPC6B-202ENST00000347691 C15orf53Q8NAA6 179 aa7.42□□□□□ -1.22
TRAPPC6B-202ENST00000347691 PRRC2AP48634 2157 aaKnown RBP7.41□□□□□ -1.22
TRAPPC6B-202ENST00000347691 GAGE12JA6NER3 117 aa7.41□□□□□ -1.22
TRAPPC6B-202ENST00000347691 B4DSR2 109 aa7.41□□□□□ -1.22
TRAPPC6B-202ENST00000347691 H7C423 109 aa7.41□□□□□ -1.22
TRAPPC6B-202ENST00000347691 GAGE7O76087 117 aa7.41□□□□□ -1.22
TRAPPC6B-202ENST00000347691 GAGE12FP0CL80 117 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms