RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 EEF1AKMT3Q96AZ1 226 aa16.03■□□□□ 0.16
TRIM3-201ENST00000345851 ABCA12Q86UK0 2595 aa16.03■□□□□ 0.16
TRIM3-201ENST00000345851 IGHV3OR16-10A0A075B7F0 116 aa16.02■□□□□ 0.16
TRIM3-201ENST00000345851 M0R1W7 72 aa16.02■□□□□ 0.16
TRIM3-201ENST00000345851 RPL32P62910 135 aaKnown RBP16.02■□□□□ 0.16
TRIM3-201ENST00000345851 ATXN8Q156A1 80 aa16.02■□□□□ 0.16
TRIM3-201ENST00000345851 ZNF876PQ49A33 203 aa16.02■□□□□ 0.16
TRIM3-201ENST00000345851 LINC00527Q9UJ94 153 aa16.02■□□□□ 0.16
TRIM3-201ENST00000345851 PTPN13Q12923 2485 aa16.02■□□□□ 0.16
TRIM3-201ENST00000345851 SUMO4Q6EEV6 95 aa16.02■□□□□ 0.15
TRIM3-201ENST00000345851 C9orf139Q6ZV77 190 aa16.02■□□□□ 0.15
TRIM3-201ENST00000345851 LINC00477Q96M19 166 aa16.02■□□□□ 0.15
TRIM3-201ENST00000345851 ZNF580Q9UK33 172 aa16.02■□□□□ 0.15
TRIM3-201ENST00000345851 SDHAF1A6NFY7 115 aa16.01■□□□□ 0.15
TRIM3-201ENST00000345851 POLR2KP53803 58 aaKnown RBP16.01■□□□□ 0.15
TRIM3-201ENST00000345851 LINC00315P59091 139 aa16.01■□□□□ 0.15
TRIM3-201ENST00000345851 LENEPQ9Y5L5 61 aa16.01■□□□□ 0.15
TRIM3-201ENST00000345851 ZANQ9Y493 2812 aa16.01■□□□□ 0.15
TRIM3-201ENST00000345851 ADARB2-AS1A8MUL3 147 aa16.01■□□□□ 0.15
TRIM3-201ENST00000345851 FAM74A4Q5TZK3 123 aa16.01■□□□□ 0.15
TRIM3-201ENST00000345851 TMEM141Q96I45 108 aa16.01■□□□□ 0.15
TRIM3-201ENST00000345851 EBI3Q14213 229 aa16■□□□□ 0.15
TRIM3-201ENST00000345851 TIMM17AQ99595 171 aa16■□□□□ 0.15
TRIM3-201ENST00000345851 U3KQE9 123 aa16■□□□□ 0.15
TRIM3-201ENST00000345851 P0DMU3 169 aa15.99■□□□□ 0.15
TRIM3-201ENST00000345851 FAM231AP0DMU4 169 aa15.99■□□□□ 0.15
TRIM3-201ENST00000345851 FAM231CP0DMU5 169 aa15.99■□□□□ 0.15
TRIM3-201ENST00000345851 LMO4P61968 165 aa15.99■□□□□ 0.15
TRIM3-201ENST00000345851 C3orf56Q8N813 242 aa15.99■□□□□ 0.15
TRIM3-201ENST00000345851 VCYO14598 125 aa15.99■□□□□ 0.15
TRIM3-201ENST00000345851 KIF25-AS1Q9Y6Z4 181 aa15.99■□□□□ 0.15
TRIM3-201ENST00000345851 NBPF19A0A087WUL8 3843 aa15.99■□□□□ 0.15
TRIM3-201ENST00000345851 A0A0B4J2C4 111 aa15.98■□□□□ 0.15
TRIM3-201ENST00000345851 H3BMM0 161 aa15.98■□□□□ 0.15
TRIM3-201ENST00000345851 TRIAP1O43715 76 aa15.98■□□□□ 0.15
TRIM3-201ENST00000345851 UBE2WQ96B02 151 aa15.98■□□□□ 0.15
TRIM3-201ENST00000345851 M0QXV9 152 aa15.98■□□□□ 0.15
TRIM3-201ENST00000345851 UNQ9165/PRO28630Q6UXU0 137 aa15.98■□□□□ 0.15
TRIM3-201ENST00000345851 C2orf82Q6UX34 121 aa15.97■□□□□ 0.15
TRIM3-201ENST00000345851 CCL19Q99731 98 aa15.97■□□□□ 0.15
TRIM3-201ENST00000345851 LEPROTO15243 131 aa15.96■□□□□ 0.15
TRIM3-201ENST00000345851 PRSS2P07478 247 aa15.96■□□□□ 0.15
TRIM3-201ENST00000345851 ANKRD17O75179 2603 aaKnown RBP15.96■□□□□ 0.15
TRIM3-201ENST00000345851 IGHV4OR15-8A0A075B7B6 117 aa15.96■□□□□ 0.14
TRIM3-201ENST00000345851 A0A087WW49 117 aa15.96■□□□□ 0.14
TRIM3-201ENST00000345851 TRBV10-2A0A0K0K1G8 114 aa15.96■□□□□ 0.14
TRIM3-201ENST00000345851 TMEM223A0PJW6 202 aa15.96■□□□□ 0.14
TRIM3-201ENST00000345851 FAM110AQ9BQ89 295 aa15.96■□□□□ 0.14
TRIM3-201ENST00000345851 SIRPDQ9H106 197 aa15.96■□□□□ 0.14
TRIM3-201ENST00000345851 TRBV7-1A0A0A6YYK4 115 aa15.95■□□□□ 0.14
TRIM3-201ENST00000345851 OVOL1O14753 267 aa15.94■□□□□ 0.14
TRIM3-201ENST00000345851 TRBV12-3P01733 135 aa15.94■□□□□ 0.14
TRIM3-201ENST00000345851 MEIG1Q5JSS6 88 aa15.94■□□□□ 0.14
TRIM3-201ENST00000345851 IGHV4-61A0A0C4DH41 118 aa15.94■□□□□ 0.14
TRIM3-201ENST00000345851 A0A0J9YXV3 536 aa15.94■□□□□ 0.14
TRIM3-201ENST00000345851 NPC2P61916 151 aa15.94■□□□□ 0.14
TRIM3-201ENST00000345851 Q6Q795 121 aa15.94■□□□□ 0.14
TRIM3-201ENST00000345851 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.93■□□□□ 0.14
TRIM3-201ENST00000345851 LGALS9O00182 355 aa15.93■□□□□ 0.14
TRIM3-201ENST00000345851 RPL13AP40429 203 aaKnown RBP15.93■□□□□ 0.14
TRIM3-201ENST00000345851 Q6ZSV7 163 aa15.93■□□□□ 0.14
TRIM3-201ENST00000345851 PRRC2AP48634 2157 aaKnown RBP15.93■□□□□ 0.14
TRIM3-201ENST00000345851 OOSP1A8MZH6 123 aa15.93■□□□□ 0.14
TRIM3-201ENST00000345851 MED14OSP0DP75 135 aa15.93■□□□□ 0.14
TRIM3-201ENST00000345851 ZNF22P17026 224 aaPredicted RBP15.93■□□□□ 0.14
TRIM3-201ENST00000345851 MINOS1Q5TGZ0 78 aa15.93■□□□□ 0.14
TRIM3-201ENST00000345851 MINOS1-NBL1R4GNA1 71 aa15.93■□□□□ 0.14
TRIM3-201ENST00000345851 ZNF56Q15929 161 aa15.93■□□□□ 0.14
TRIM3-201ENST00000345851 DUX3Q96PT4 197 aa15.93■□□□□ 0.14
TRIM3-201ENST00000345851 ATP5J2P56134 94 aa15.92■□□□□ 0.14
TRIM3-201ENST00000345851 SAA4P35542 130 aa15.92■□□□□ 0.14
TRIM3-201ENST00000345851 POM121L12Q8N7R1 296 aa15.92■□□□□ 0.14
TRIM3-201ENST00000345851 A0A0J9YXY3 114 aa15.91■□□□□ 0.14
TRIM3-201ENST00000345851 TMEM219Q86XT9 240 aa15.91■□□□□ 0.14
TRIM3-201ENST00000345851 CLEC2BQ92478 149 aa15.91■□□□□ 0.14
TRIM3-201ENST00000345851 CHCHD5Q9BSY4 110 aa15.91■□□□□ 0.14
TRIM3-201ENST00000345851 BRD3OSQ6XYD6 125 aa15.91■□□□□ 0.14
TRIM3-201ENST00000345851 SPXQ9BT56 116 aa15.91■□□□□ 0.14
TRIM3-201ENST00000345851 H7C423 109 aa15.9■□□□□ 0.14
TRIM3-201ENST00000345851 UBE2E1P51965 193 aa15.9■□□□□ 0.14
TRIM3-201ENST00000345851 M0R2P5 195 aa15.9■□□□□ 0.14
TRIM3-201ENST00000345851 IGHV4-30-2A0A087WSY4 118 aa15.89■□□□□ 0.13
TRIM3-201ENST00000345851 TRBV30A0A0K0K1B3 111 aa15.89■□□□□ 0.13
TRIM3-201ENST00000345851 TRBV27A0A0K0K1C4 114 aa15.89■□□□□ 0.13
TRIM3-201ENST00000345851 SOCS3O14543 225 aa15.89■□□□□ 0.13
TRIM3-201ENST00000345851 NXPH4O95158 308 aa15.89■□□□□ 0.13
TRIM3-201ENST00000345851 UBR5O95071 2799 aaPredicted RBP15.88■□□□□ 0.13
TRIM3-201ENST00000345851 TRAV12-3A0A0B4J271 114 aa15.88■□□□□ 0.13
TRIM3-201ENST00000345851 ICOSQ9Y6W8 199 aa15.88■□□□□ 0.13
TRIM3-201ENST00000345851 ZNF843Q8N446 348 aa15.88■□□□□ 0.13
TRIM3-201ENST00000345851 FAM19A4Q96LR4 140 aa15.88■□□□□ 0.13
TRIM3-201ENST00000345851 TRAV8-3A0A0A6YYJ7 113 aa15.87■□□□□ 0.13
TRIM3-201ENST00000345851 IGHV3-11P01762 117 aa15.87■□□□□ 0.13
TRIM3-201ENST00000345851 CHD6Q8TD26 2715 aa15.87■□□□□ 0.13
TRIM3-201ENST00000345851 ZNF469Q96JG9 3925 aaPredicted RBP15.86■□□□□ 0.13
TRIM3-201ENST00000345851 MAPK1IP1LQ8NDC0 245 aa15.86■□□□□ 0.13
TRIM3-201ENST00000345851 IGHV3-30-3P0DP02 117 aa15.85■□□□□ 0.13
TRIM3-201ENST00000345851 ADAMTSL4-AS1Q5T5F5 129 aa15.85■□□□□ 0.13
TRIM3-201ENST00000345851 DOPEY2Q9Y3R5 2298 aa15.85■□□□□ 0.13
TRIM3-201ENST00000345851 NAV2Q8IVL1 2488 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms