RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 SRIP30626 198 aa13.03□□□□□ -0.32
CDHR4-201ENST00000343366 BTF3L4Q96K17 158 aa13.03□□□□□ -0.32
CDHR4-201ENST00000343366 RPS10P5Q9NQ39 176 aa13.03□□□□□ -0.32
CDHR4-201ENST00000343366 HBBP68871 147 aa13.02□□□□□ -0.33
CDHR4-201ENST00000343366 NEGR1Q7Z3B1 354 aa13.02□□□□□ -0.33
CDHR4-201ENST00000343366 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.02□□□□□ -0.33
CDHR4-201ENST00000343366 A0A096LPF7 62 aa13.01□□□□□ -0.33
CDHR4-201ENST00000343366 MGPP08493 103 aa13.01□□□□□ -0.33
CDHR4-201ENST00000343366 CCL18P55774 89 aa13.01□□□□□ -0.33
CDHR4-201ENST00000343366 FAM3BP58499 235 aaPredicted RBP13.01□□□□□ -0.33
CDHR4-201ENST00000343366 RPL36AP83881 106 aaKnown RBP13.01□□□□□ -0.33
CDHR4-201ENST00000343366 RASL11AQ6T310 242 aa13.01□□□□□ -0.33
CDHR4-201ENST00000343366 RPL36ALQ969Q0 106 aaKnown RBP13.01□□□□□ -0.33
CDHR4-201ENST00000343366 LINC00315P59091 139 aa13□□□□□ -0.33
CDHR4-201ENST00000343366 DNAJC30Q96LL9 226 aa13□□□□□ -0.33
CDHR4-201ENST00000343366 TRBV7-3A0A075B6L6 115 aa12.98□□□□□ -0.33
CDHR4-201ENST00000343366 A0A1B0GXF2 115 aa12.98□□□□□ -0.33
CDHR4-201ENST00000343366 Q6ZSN1 163 aa12.98□□□□□ -0.33
CDHR4-201ENST00000343366 GATD1Q8NB37 220 aa12.98□□□□□ -0.33
CDHR4-201ENST00000343366 PPP1R17O96001 155 aa12.97□□□□□ -0.33
CDHR4-201ENST00000343366 CAMPP49913 170 aa12.97□□□□□ -0.33
CDHR4-201ENST00000343366 TIRAPP58753 221 aa12.97□□□□□ -0.33
CDHR4-201ENST00000343366 COX19Q49B96 90 aa12.97□□□□□ -0.33
CDHR4-201ENST00000343366 MRPL54Q6P161 138 aaKnown RBP12.97□□□□□ -0.33
CDHR4-201ENST00000343366 MRAP2Q96G30 205 aa12.97□□□□□ -0.33
CDHR4-201ENST00000343366 M0QY20 66 aa12.96□□□□□ -0.33
CDHR4-201ENST00000343366 SUMO4Q6EEV6 95 aa12.96□□□□□ -0.33
CDHR4-201ENST00000343366 ATP6V0E2Q8NHE4 81 aa12.96□□□□□ -0.33
CDHR4-201ENST00000343366 NIT2Q9NQR4 276 aa12.96□□□□□ -0.33
CDHR4-201ENST00000343366 FAM104BQ5XKR9 115 aa12.95□□□□□ -0.34
CDHR4-201ENST00000343366 UBE2DNLQ8IWF7 75 aa12.95□□□□□ -0.34
CDHR4-201ENST00000343366 TNFRSF18Q9Y5U5 241 aa12.95□□□□□ -0.34
CDHR4-201ENST00000343366 A0A1B0GVY2 172 aa12.94□□□□□ -0.34
CDHR4-201ENST00000343366 GAGE12JA6NER3 117 aa12.94□□□□□ -0.34
CDHR4-201ENST00000343366 LINC00694P0DN24 101 aa12.94□□□□□ -0.34
CDHR4-201ENST00000343366 RAB4AP20338 218 aa12.94□□□□□ -0.34
CDHR4-201ENST00000343366 GAGE1Q13065 139 aa12.94□□□□□ -0.34
CDHR4-201ENST00000343366 GAGE4Q13068 117 aa12.94□□□□□ -0.34
CDHR4-201ENST00000343366 GAGE5Q13069 117 aa12.94□□□□□ -0.34
CDHR4-201ENST00000343366 GAGE13Q4V321 117 aa12.94□□□□□ -0.34
CDHR4-201ENST00000343366 TMEM97Q5BJF2 176 aa12.94□□□□□ -0.34
CDHR4-201ENST00000343366 NEXN-AS1Q8NBZ9 246 aa12.94□□□□□ -0.34
CDHR4-201ENST00000343366 ZNRF2Q8NHG8 242 aa12.94□□□□□ -0.34
CDHR4-201ENST00000343366 GTSF1LQ9H1H1 148 aa12.94□□□□□ -0.34
CDHR4-201ENST00000343366 HSPG2P98160 4391 aa12.93□□□□□ -0.34
CDHR4-201ENST00000343366 LOC100131303A0A0U1RQF7 123 aa12.93□□□□□ -0.34
CDHR4-201ENST00000343366 PPBPP02775 128 aa12.93□□□□□ -0.34
CDHR4-201ENST00000343366 DAZ4Q86SG3 579 aaKnown RBP12.93□□□□□ -0.34
CDHR4-201ENST00000343366 AMN1Q8IY45 258 aa12.93□□□□□ -0.34
CDHR4-201ENST00000343366 DAZ3Q9NR90 486 aaKnown RBP12.93□□□□□ -0.34
CDHR4-201ENST00000343366 UBE2D3P61077 147 aa12.92□□□□□ -0.34
CDHR4-201ENST00000343366 UBE2D2P62837 147 aa12.92□□□□□ -0.34
CDHR4-201ENST00000343366 LYPD5Q6UWN5 251 aa12.92□□□□□ -0.34
CDHR4-201ENST00000343366 UPK3BQ9BT76 320 aa12.92□□□□□ -0.34
CDHR4-201ENST00000343366 MRPS16Q9Y3D3 137 aaKnown RBP12.92□□□□□ -0.34
CDHR4-201ENST00000343366 ESRGQ1W209 222 aa12.91□□□□□ -0.34
CDHR4-201ENST00000343366 RNF185Q96GF1 192 aa12.91□□□□□ -0.34
CDHR4-201ENST00000343366 URGCP-MRPS24S4R325 110 aa12.91□□□□□ -0.34
CDHR4-201ENST00000343366 TRBV6-5A0A0K0K1A5 114 aa12.89□□□□□ -0.35
CDHR4-201ENST00000343366 HLA-DQA1P01909 254 aa12.89□□□□□ -0.35
CDHR4-201ENST00000343366 MT-ND6P03923 174 aa12.89□□□□□ -0.35
CDHR4-201ENST00000343366 OR10J3Q5JRS4 329 aa12.89□□□□□ -0.35
CDHR4-201ENST00000343366 GNB1LQ9BYB4 327 aa12.89□□□□□ -0.35
CDHR4-201ENST00000343366 SMCO4Q9NRQ5 59 aa12.89□□□□□ -0.35
CDHR4-201ENST00000343366 LINC00588Q9Y4M8 146 aa12.89□□□□□ -0.35
CDHR4-201ENST00000343366 TRAV8-6A0A0B4J262 113 aa12.88□□□□□ -0.35
CDHR4-201ENST00000343366 CKS2P33552 79 aa12.88□□□□□ -0.35
CDHR4-201ENST00000343366 MRPL51Q4U2R6 128 aaKnown RBP12.88□□□□□ -0.35
CDHR4-201ENST00000343366 LELP1Q5T871 98 aa12.88□□□□□ -0.35
CDHR4-201ENST00000343366 KRTAP4-5Q9BYR2 181 aa12.88□□□□□ -0.35
CDHR4-201ENST00000343366 TRBV24-1A0A075B6N3 115 aa12.87□□□□□ -0.35
CDHR4-201ENST00000343366 TRAV26-2A0A0B4J265 109 aa12.87□□□□□ -0.35
CDHR4-201ENST00000343366 K7EP13 123 aa12.87□□□□□ -0.35
CDHR4-201ENST00000343366 PHOX2AO14813 284 aa12.87□□□□□ -0.35
CDHR4-201ENST00000343366 ST20Q9HBF5 79 aa12.87□□□□□ -0.35
CDHR4-201ENST00000343366 Q9UF83 564 aa12.87□□□□□ -0.35
CDHR4-201ENST00000343366 LAMTOR2Q9Y2Q5 125 aa12.87□□□□□ -0.35
CDHR4-201ENST00000343366 ELOBQ15370 118 aa12.86□□□□□ -0.35
CDHR4-201ENST00000343366 ORMDL3Q8N138 153 aa12.86□□□□□ -0.35
CDHR4-201ENST00000343366 PKIAP61925 76 aa12.85□□□□□ -0.35
CDHR4-201ENST00000343366 C20orf78Q9BR46 151 aa12.85□□□□□ -0.35
CDHR4-201ENST00000343366 NCR2O95944 276 aa12.84□□□□□ -0.35
CDHR4-201ENST00000343366 S100A1P23297 94 aa12.84□□□□□ -0.35
CDHR4-201ENST00000343366 ATRAIDQ6UW56 229 aa12.84□□□□□ -0.35
CDHR4-201ENST00000343366 TMEM136Q6ZRR5 245 aa12.84□□□□□ -0.35
CDHR4-201ENST00000343366 LINC00336Q6ZUF6 198 aa12.84□□□□□ -0.35
CDHR4-201ENST00000343366 Q9H8V8 135 aa12.84□□□□□ -0.35
CDHR4-201ENST00000343366 SDHAF1A6NFY7 115 aa12.83□□□□□ -0.36
CDHR4-201ENST00000343366 TCAPO15273 167 aa12.83□□□□□ -0.36
CDHR4-201ENST00000343366 SIVA1O15304 175 aa12.83□□□□□ -0.36
CDHR4-201ENST00000343366 RPL32P62910 135 aaKnown RBP12.83□□□□□ -0.36
CDHR4-201ENST00000343366 COTL1Q14019 142 aa12.83□□□□□ -0.36
CDHR4-201ENST00000343366 RPL39LQ96EH5 51 aaKnown RBP12.83□□□□□ -0.36
CDHR4-201ENST00000343366 TRBV6-8A0A0A6YYG3 113 aa12.82□□□□□ -0.36
CDHR4-201ENST00000343366 D6R8Y8 96 aa12.82□□□□□ -0.36
CDHR4-201ENST00000343366 I3L3M4 83 aa12.82□□□□□ -0.36
CDHR4-201ENST00000343366 APCSP02743 223 aa12.82□□□□□ -0.36
CDHR4-201ENST00000343366 SUMO2P61956 95 aaKnown RBP12.82□□□□□ -0.36
CDHR4-201ENST00000343366 TTC32Q5I0X7 151 aa12.82□□□□□ -0.36
CDHR4-201ENST00000343366 TRBV25-1A0A075B6N4 114 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms