RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 MLANAQ16655 118 aa4.84□□□□□ -1.63
CSMD1-201ENST00000335551 DAND5Q8N907 189 aa4.84□□□□□ -1.63
CSMD1-201ENST00000335551 COL4A5P29400 1685 aa4.84□□□□□ -1.63
CSMD1-201ENST00000335551 IGHV4OR15-8A0A075B7B6 117 aa4.84□□□□□ -1.63
CSMD1-201ENST00000335551 A0A087WW49 117 aa4.84□□□□□ -1.63
CSMD1-201ENST00000335551 GNLYP22749 145 aa4.84□□□□□ -1.63
CSMD1-201ENST00000335551 FLVCR1-AS1Q8TAF5 88 aa4.84□□□□□ -1.63
CSMD1-201ENST00000335551 IGKV2D-26A0A0A0MRZ7 120 aa4.84□□□□□ -1.64
CSMD1-201ENST00000335551 WDR86Q86TI4 376 aa4.84□□□□□ -1.64
CSMD1-201ENST00000335551 IGKV1OR2-108A0A075B7D4 117 aa4.84□□□□□ -1.64
CSMD1-201ENST00000335551 P0DMU3 169 aa4.84□□□□□ -1.64
CSMD1-201ENST00000335551 FAM231AP0DMU4 169 aa4.84□□□□□ -1.64
CSMD1-201ENST00000335551 FAM231CP0DMU5 169 aa4.84□□□□□ -1.64
CSMD1-201ENST00000335551 CRIPAKQ8N1N5 446 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 IGF2RP11717 2491 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 SMIM26A0A096LP01 95 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 PRR20EP86478 221 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 PRR20CP86479 221 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 PRR20DP86480 221 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 PRR20BP86481 221 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 PRR20AP86496 221 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 LYPD6Q86Y78 171 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 KIR2DL5BQ8NHK3 375 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 PMAIP1Q13794 54 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 ENHOQ6UWT2 76 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 SPATA12Q7Z6I5 190 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 B9D2Q9BPU9 175 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 GYPEP15421 78 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 HOXB4P17483 251 aaPredicted RBP4.83□□□□□ -1.64
CSMD1-201ENST00000335551 ASPHD1Q5U4P2 390 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 GP9P14770 177 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 MLST8Q9BVC4 326 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 FASNP49327 2511 aaKnown RBP4.83□□□□□ -1.64
CSMD1-201ENST00000335551 CENPVL3A0A0U1RRI6 287 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 NCR3O14931 201 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 ZNF581Q9P0T4 197 aa4.83□□□□□ -1.64
CSMD1-201ENST00000335551 LINC00205P59089 165 aa4.82□□□□□ -1.64
CSMD1-201ENST00000335551 PIK3CD-AS1Q5SR53 167 aa4.82□□□□□ -1.64
CSMD1-201ENST00000335551 Q6ZQT7 251 aa4.82□□□□□ -1.64
CSMD1-201ENST00000335551 MED14OSP0DP75 135 aa4.82□□□□□ -1.64
CSMD1-201ENST00000335551 LINC00173Q6ZV60 143 aa4.82□□□□□ -1.64
CSMD1-201ENST00000335551 C5orf38Q86SI9 138 aa4.82□□□□□ -1.64
CSMD1-201ENST00000335551 SERP1Q9Y6X1 66 aa4.82□□□□□ -1.64
CSMD1-201ENST00000335551 PINLYPA6NC86 204 aa4.82□□□□□ -1.64
CSMD1-201ENST00000335551 GTSF1Q8WW33 167 aa4.82□□□□□ -1.64
CSMD1-201ENST00000335551 COX7CP15954 63 aa4.82□□□□□ -1.64
CSMD1-201ENST00000335551 RBX1P62877 108 aa4.82□□□□□ -1.64
CSMD1-201ENST00000335551 A0A0J9YXV3 536 aa4.82□□□□□ -1.64
CSMD1-201ENST00000335551 C17orf58Q2M2W7 97 aa4.81□□□□□ -1.64
CSMD1-201ENST00000335551 TM2D2Q9BX73 214 aa4.81□□□□□ -1.64
CSMD1-201ENST00000335551 C15orf65H3BRN8 121 aa4.81□□□□□ -1.64
CSMD1-201ENST00000335551 GNRH2O43555 120 aa4.81□□□□□ -1.64
CSMD1-201ENST00000335551 MSMBP08118 114 aa4.81□□□□□ -1.64
CSMD1-201ENST00000335551 TRBV6-1A0A0K0K1D8 114 aa4.81□□□□□ -1.64
CSMD1-201ENST00000335551 G3V318 75 aa4.81□□□□□ -1.64
CSMD1-201ENST00000335551 LTBP1Q14766 1721 aa4.81□□□□□ -1.64
CSMD1-201ENST00000335551 MBD3L4A6NDZ8 208 aaPredicted RBP4.81□□□□□ -1.64
CSMD1-201ENST00000335551 MBD3L3A6NE82 208 aaPredicted RBP4.81□□□□□ -1.64
CSMD1-201ENST00000335551 MBD3L5A6NJ08 208 aaPredicted RBP4.81□□□□□ -1.64
CSMD1-201ENST00000335551 IGHV3-30-3P0DP02 117 aa4.81□□□□□ -1.64
CSMD1-201ENST00000335551 LYPD2Q6UXB3 125 aa4.81□□□□□ -1.64
CSMD1-201ENST00000335551 MBD3L2Q8NHZ7 208 aaPredicted RBP4.81□□□□□ -1.64
CSMD1-201ENST00000335551 AGPAT4-IT1Q9H0P7 198 aa4.81□□□□□ -1.64
CSMD1-201ENST00000335551 J3QLI3 93 aa4.8□□□□□ -1.64
CSMD1-201ENST00000335551 Q9HAA7 133 aa4.8□□□□□ -1.64
CSMD1-201ENST00000335551 A0A0J9YXY3 114 aa4.8□□□□□ -1.64
CSMD1-201ENST00000335551 MDFICQ9P1T7 246 aa4.8□□□□□ -1.64
CSMD1-201ENST00000335551 NUPR1O60356 82 aa4.8□□□□□ -1.64
CSMD1-201ENST00000335551 A0A0G2JNJ9 132 aa4.8□□□□□ -1.64
CSMD1-201ENST00000335551 Q9UFV3 132 aa4.8□□□□□ -1.64
CSMD1-201ENST00000335551 CHD8Q9HCK8 2581 aa4.8□□□□□ -1.64
CSMD1-201ENST00000335551 PRRC2CQ9Y520 2896 aaKnown RBP4.8□□□□□ -1.64
CSMD1-201ENST00000335551 CCDC179H3BU77 68 aa4.8□□□□□ -1.64
CSMD1-201ENST00000335551 C5orf24Q7Z6I8 188 aa4.8□□□□□ -1.64
CSMD1-201ENST00000335551 C17orf77Q96MU5 243 aa4.8□□□□□ -1.64
CSMD1-201ENST00000335551 SPRY4Q9C004 299 aa4.8□□□□□ -1.64
CSMD1-201ENST00000335551 ZNF491Q8N8L2 437 aa4.8□□□□□ -1.64
CSMD1-201ENST00000335551 GATA1P15976 413 aaPredicted RBP4.8□□□□□ -1.64
CSMD1-201ENST00000335551 RPL39P62891 51 aaKnown RBP4.8□□□□□ -1.64
CSMD1-201ENST00000335551 TMEM105Q8N8V8 129 aa4.8□□□□□ -1.64
CSMD1-201ENST00000335551 M0QXV9 152 aa4.8□□□□□ -1.64
CSMD1-201ENST00000335551 RNF144BQ7Z419 303 aa4.8□□□□□ -1.64
CSMD1-201ENST00000335551 MIR7-3HGQ8N6C7 128 aa4.8□□□□□ -1.64
CSMD1-201ENST00000335551 C1orf147Q96MC9 270 aaPredicted RBP4.8□□□□□ -1.64
CSMD1-201ENST00000335551 NFE4Q86UQ8 179 aa4.79□□□□□ -1.64
CSMD1-201ENST00000335551 C14orf177Q52M58 125 aa4.79□□□□□ -1.64
CSMD1-201ENST00000335551 Q6ZS92 163 aa4.79□□□□□ -1.64
CSMD1-201ENST00000335551 IGLV10-54A0A075B6I4 117 aa4.79□□□□□ -1.64
CSMD1-201ENST00000335551 A0A096LPF7 62 aa4.79□□□□□ -1.64
CSMD1-201ENST00000335551 SMIM9A6NGZ8 99 aa4.79□□□□□ -1.64
CSMD1-201ENST00000335551 UFSP1Q6NVU6 142 aa4.79□□□□□ -1.64
CSMD1-201ENST00000335551 COL4A1P02462 1669 aa4.79□□□□□ -1.64
CSMD1-201ENST00000335551 FSHBP01225 129 aa4.79□□□□□ -1.64
CSMD1-201ENST00000335551 SPAG11BQ08648 103 aa4.79□□□□□ -1.64
CSMD1-201ENST00000335551 BPESC1Q9GZL8 116 aa4.79□□□□□ -1.64
CSMD1-201ENST00000335551 CLUHP3Q96NS8 147 aa4.79□□□□□ -1.64
CSMD1-201ENST00000335551 TRBV30A0A0K0K1B3 111 aa4.79□□□□□ -1.64
CSMD1-201ENST00000335551 LOXL1Q08397 574 aaPredicted RBP4.79□□□□□ -1.64
CSMD1-201ENST00000335551 RUSC1-AS1Q66K80 236 aa4.78□□□□□ -1.64
CSMD1-201ENST00000335551 COL8A2P25067 703 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms