RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 PRO0255Q9UI72 69 aa11.36□□□□□ -0.59
C9orf47-201ENST00000334490 KLK5Q9Y337 293 aaPredicted RBP11.36□□□□□ -0.59
C9orf47-201ENST00000334490 BBC3Q96PG8 261 aaPredicted RBP11.36□□□□□ -0.59
C9orf47-201ENST00000334490 PSMB8P28062 276 aa11.35□□□□□ -0.59
C9orf47-201ENST00000334490 Q6ZS46 218 aa11.35□□□□□ -0.59
C9orf47-201ENST00000334490 TRBV6-1A0A0K0K1D8 114 aa11.35□□□□□ -0.59
C9orf47-201ENST00000334490 CTRLP40313 264 aa11.35□□□□□ -0.59
C9orf47-201ENST00000334490 PCP4P48539 62 aa11.35□□□□□ -0.59
C9orf47-201ENST00000334490 ZFAND3Q9H8U3 227 aa11.35□□□□□ -0.59
C9orf47-201ENST00000334490 Q9H8V8 135 aa11.35□□□□□ -0.59
C9orf47-201ENST00000334490 FLNBO75369 2602 aaKnown RBP11.34□□□□□ -0.59
C9orf47-201ENST00000334490 A0A0J9YXV3 536 aa11.34□□□□□ -0.59
C9orf47-201ENST00000334490 IGLC3P0DOY3 106 aa11.34□□□□□ -0.59
C9orf47-201ENST00000334490 FGF6P10767 208 aa11.34□□□□□ -0.59
C9orf47-201ENST00000334490 TRAV8-4A0A0B4J246 113 aa11.34□□□□□ -0.59
C9orf47-201ENST00000334490 SLC25A29Q8N8R3 303 aa11.34□□□□□ -0.59
C9orf47-201ENST00000334490 C11orf45Q8TAV5 145 aa11.34□□□□□ -0.59
C9orf47-201ENST00000334490 SNHG12Q9BXW3 62 aa11.34□□□□□ -0.59
C9orf47-201ENST00000334490 COX8AP10176 69 aa11.34□□□□□ -0.59
C9orf47-201ENST00000334490 ZNF80P51504 273 aaPredicted RBP11.34□□□□□ -0.59
C9orf47-201ENST00000334490 UBE2BP63146 152 aa11.34□□□□□ -0.59
C9orf47-201ENST00000334490 VSIG2Q96IQ7 327 aa11.34□□□□□ -0.59
C9orf47-201ENST00000334490 CAMK2N2Q96S95 79 aa11.34□□□□□ -0.59
C9orf47-201ENST00000334490 LINC00482Q8N8I6 264 aa11.34□□□□□ -0.59
C9orf47-201ENST00000334490 TMEM126AQ9H061 195 aa11.34□□□□□ -0.59
C9orf47-201ENST00000334490 CDK2AP2O75956 126 aa11.33□□□□□ -0.6
C9orf47-201ENST00000334490 RPL39P62891 51 aaKnown RBP11.33□□□□□ -0.6
C9orf47-201ENST00000334490 SCRT2Q9NQ03 307 aa11.33□□□□□ -0.6
C9orf47-201ENST00000334490 COX7A2LO14548 114 aa11.33□□□□□ -0.6
C9orf47-201ENST00000334490 Q6ZTI0 123 aa11.33□□□□□ -0.6
C9orf47-201ENST00000334490 C9JAW5 83 aa11.32□□□□□ -0.6
C9orf47-201ENST00000334490 C19orf71A6NCJ1 209 aa11.32□□□□□ -0.6
C9orf47-201ENST00000334490 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.32□□□□□ -0.6
C9orf47-201ENST00000334490 KLK12Q9UKR0 248 aa11.32□□□□□ -0.6
C9orf47-201ENST00000334490 ZNF124Q15973 351 aa11.32□□□□□ -0.6
C9orf47-201ENST00000334490 BOD1L2Q8IYS8 172 aa11.32□□□□□ -0.6
C9orf47-201ENST00000334490 MBD6Q96DN6 1003 aa11.32□□□□□ -0.6
C9orf47-201ENST00000334490 ACANP16112 2415 aa11.32□□□□□ -0.6
C9orf47-201ENST00000334490 FAM222AQ5U5X8 452 aa11.32□□□□□ -0.6
C9orf47-201ENST00000334490 HCFC1P51610 2035 aa11.31□□□□□ -0.6
C9orf47-201ENST00000334490 TP53TG3Q9ULZ0 132 aa11.31□□□□□ -0.6
C9orf47-201ENST00000334490 TRAV4A0A0B4J268 109 aa11.3□□□□□ -0.6
C9orf47-201ENST00000334490 DSCAML1Q8TD84 2053 aa11.3□□□□□ -0.6
C9orf47-201ENST00000334490 C20orf173Q96LM9 149 aa11.3□□□□□ -0.6
C9orf47-201ENST00000334490 ODF3Q96PU9 254 aa11.3□□□□□ -0.6
C9orf47-201ENST00000334490 C18orf65Q6ZTR6 163 aa11.29□□□□□ -0.6
C9orf47-201ENST00000334490 IL17DQ8TAD2 202 aa11.29□□□□□ -0.6
C9orf47-201ENST00000334490 TRBV10-1A0A0K0K1A3 114 aa11.29□□□□□ -0.6
C9orf47-201ENST00000334490 RPL18AQ02543 176 aaKnown RBP11.29□□□□□ -0.6
C9orf47-201ENST00000334490 TRAV26-1A0A087WT03 109 aa11.28□□□□□ -0.6
C9orf47-201ENST00000334490 LINC00322Q6ZN03 302 aaPredicted RBP11.28□□□□□ -0.6
C9orf47-201ENST00000334490 TRAV13-2A0A0B4J235 113 aa11.28□□□□□ -0.6
C9orf47-201ENST00000334490 FAM110AQ9BQ89 295 aa11.28□□□□□ -0.6
C9orf47-201ENST00000334490 SMIM9A6NGZ8 99 aa11.28□□□□□ -0.6
C9orf47-201ENST00000334490 FRMD6-AS1P0C7T7 363 aa11.28□□□□□ -0.6
C9orf47-201ENST00000334490 PRO1854Q9UHT4 67 aa11.28□□□□□ -0.6
C9orf47-201ENST00000334490 GAGE2EQ4V326 116 aa11.28□□□□□ -0.6
C9orf47-201ENST00000334490 LINC00173Q6ZV60 143 aa11.28□□□□□ -0.6
C9orf47-201ENST00000334490 GAGE2DQ9UEU5 116 aa11.28□□□□□ -0.6
C9orf47-201ENST00000334490 MAJINQ3KP22 176 aa11.27□□□□□ -0.6
C9orf47-201ENST00000334490 TM2D2Q9BX73 214 aa11.27□□□□□ -0.61
C9orf47-201ENST00000334490 TAL2Q16559 108 aa11.27□□□□□ -0.61
C9orf47-201ENST00000334490 IGLV1-40P01703 118 aa11.26□□□□□ -0.61
C9orf47-201ENST00000334490 HERV-K104P63124 156 aa11.26□□□□□ -0.61
C9orf47-201ENST00000334490 SPATA25Q9BR10 227 aa11.26□□□□□ -0.61
C9orf47-201ENST00000334490 DNAH12Q6ZR08 3092 aa11.26□□□□□ -0.61
C9orf47-201ENST00000334490 NUPR1O60356 82 aa11.26□□□□□ -0.61
C9orf47-201ENST00000334490 PCP2Q8IVA1 136 aa11.26□□□□□ -0.61
C9orf47-201ENST00000334490 GDF5OSQ5U4N7 250 aa11.25□□□□□ -0.61
C9orf47-201ENST00000334490 COA6Q5JTJ3 125 aaKnown RBP11.25□□□□□ -0.61
C9orf47-201ENST00000334490 LYRM9A8MSI8 78 aa11.25□□□□□ -0.61
C9orf47-201ENST00000334490 IGLV2-8P01709 118 aa11.25□□□□□ -0.61
C9orf47-201ENST00000334490 P0DMU3 169 aa11.25□□□□□ -0.61
C9orf47-201ENST00000334490 FAM231AP0DMU4 169 aa11.25□□□□□ -0.61
C9orf47-201ENST00000334490 FAM231CP0DMU5 169 aa11.25□□□□□ -0.61
C9orf47-201ENST00000334490 MRPL52Q86TS9 123 aaKnown RBP11.24□□□□□ -0.61
C9orf47-201ENST00000334490 GAGE2AQ6NT46 116 aa11.24□□□□□ -0.61
C9orf47-201ENST00000334490 MLST8Q9BVC4 326 aa11.24□□□□□ -0.61
C9orf47-201ENST00000334490 DEFB131BA0A096LNP1 70 aa11.24□□□□□ -0.61
C9orf47-201ENST00000334490 HIST1H4AP62805 103 aaKnown RBP11.24□□□□□ -0.61
C9orf47-201ENST00000334490 C20orf203Q8NBC4 194 aa11.24□□□□□ -0.61
C9orf47-201ENST00000334490 PKIGQ9Y2B9 76 aa11.24□□□□□ -0.61
C9orf47-201ENST00000334490 CEP350Q5VT06 3117 aa11.24□□□□□ -0.61
C9orf47-201ENST00000334490 CEND1Q8N111 149 aa11.23□□□□□ -0.61
C9orf47-201ENST00000334490 TIMM17AQ99595 171 aa11.23□□□□□ -0.61
C9orf47-201ENST00000334490 TRBV20-1A0A075B6N2 111 aa11.23□□□□□ -0.61
C9orf47-201ENST00000334490 ZFAND2AQ8N6M9 145 aa11.23□□□□□ -0.61
C9orf47-201ENST00000334490 COX7B2Q8TF08 81 aa11.23□□□□□ -0.61
C9orf47-201ENST00000334490 NDUFA1O15239 70 aa11.22□□□□□ -0.61
C9orf47-201ENST00000334490 BVES-AS1Q5T3Y7 98 aa11.22□□□□□ -0.61
C9orf47-201ENST00000334490 WFDC10AQ9H1F0 79 aa11.22□□□□□ -0.61
C9orf47-201ENST00000334490 CCL25O15444 150 aa11.22□□□□□ -0.61
C9orf47-201ENST00000334490 DLEU1O43261 78 aa11.22□□□□□ -0.61
C9orf47-201ENST00000334490 COX11Q9Y6N1 276 aa11.22□□□□□ -0.61
C9orf47-201ENST00000334490 MIFP14174 115 aa11.21□□□□□ -0.61
C9orf47-201ENST00000334490 TOMM6Q96B49 74 aa11.21□□□□□ -0.61
C9orf47-201ENST00000334490 EML5Q05BV3 1969 aa11.21□□□□□ -0.61
C9orf47-201ENST00000334490 IGLC6P0CF74 106 aa11.21□□□□□ -0.61
C9orf47-201ENST00000334490 SPAG11BQ08648 103 aa11.21□□□□□ -0.61
C9orf47-201ENST00000334490 GAGE2BQ13066 116 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms