RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PTH2Q96A98 100 aa12.72□□□□□ -0.37
PTCH1-201ENST00000331920 DSCAMO60469 2012 aa12.72□□□□□ -0.37
PTCH1-201ENST00000331920 IL15RAQ13261 267 aa12.72□□□□□ -0.37
PTCH1-201ENST00000331920 SLPIP03973 132 aa12.71□□□□□ -0.37
PTCH1-201ENST00000331920 MSRB1Q9NZV6 116 aa12.71□□□□□ -0.37
PTCH1-201ENST00000331920 FAM19A5Q7Z5A7 132 aaPredicted RBP12.71□□□□□ -0.38
PTCH1-201ENST00000331920 Q6ZR03 302 aa12.7□□□□□ -0.38
PTCH1-201ENST00000331920 CXCL5P42830 114 aa12.7□□□□□ -0.38
PTCH1-201ENST00000331920 AJUBAQ96IF1 538 aa12.7□□□□□ -0.38
PTCH1-201ENST00000331920 ZFP36P26651 326 aaKnown RBP12.7□□□□□ -0.38
PTCH1-201ENST00000331920 IGHV2-5P01817 119 aa12.69□□□□□ -0.38
PTCH1-201ENST00000331920 C1orf158Q8N1D5 194 aa12.69□□□□□ -0.38
PTCH1-201ENST00000331920 Q8TCH9 128 aa12.69□□□□□ -0.38
PTCH1-201ENST00000331920 CENPVL3A0A0U1RRI6 287 aa12.69□□□□□ -0.38
PTCH1-201ENST00000331920 NFE4Q86UQ8 179 aa12.69□□□□□ -0.38
PTCH1-201ENST00000331920 TTTY13Q9BZ97 58 aa12.69□□□□□ -0.38
PTCH1-201ENST00000331920 LINC00269Q8N2A0 174 aa12.69□□□□□ -0.38
PTCH1-201ENST00000331920 ZFAND3Q9H8U3 227 aa12.69□□□□□ -0.38
PTCH1-201ENST00000331920 PRSS33Q8NF86 280 aa12.69□□□□□ -0.38
PTCH1-201ENST00000331920 AGRNO00468 2067 aa12.69□□□□□ -0.38
PTCH1-201ENST00000331920 BLCAPP62952 87 aa12.69□□□□□ -0.38
PTCH1-201ENST00000331920 SMAD5-AS1Q9Y6J3 95 aa12.69□□□□□ -0.38
PTCH1-201ENST00000331920 C16orf54Q6UWD8 224 aa12.68□□□□□ -0.38
PTCH1-201ENST00000331920 H3BUA1 57 aa12.68□□□□□ -0.38
PTCH1-201ENST00000331920 SERP2Q8N6R1 65 aa12.68□□□□□ -0.38
PTCH1-201ENST00000331920 PLXNA3P51805 1871 aa12.68□□□□□ -0.38
PTCH1-201ENST00000331920 PPDPFQ9H3Y8 114 aa12.68□□□□□ -0.38
PTCH1-201ENST00000331920 CRYGDP07320 174 aa12.68□□□□□ -0.38
PTCH1-201ENST00000331920 TDRG1Q3Y452 100 aa12.68□□□□□ -0.38
PTCH1-201ENST00000331920 C11orf45Q8TAV5 145 aa12.68□□□□□ -0.38
PTCH1-201ENST00000331920 DCANP1Q8TF63 244 aa12.68□□□□□ -0.38
PTCH1-201ENST00000331920 CEMP1Q6PRD7 247 aaPredicted RBP12.67□□□□□ -0.38
PTCH1-201ENST00000331920 MGAMO43451 1857 aa12.67□□□□□ -0.38
PTCH1-201ENST00000331920 C14orf177Q52M58 125 aa12.67□□□□□ -0.38
PTCH1-201ENST00000331920 NRGNQ92686 78 aa12.67□□□□□ -0.38
PTCH1-201ENST00000331920 RITA1Q96K30 269 aa12.67□□□□□ -0.38
PTCH1-201ENST00000331920 COL5A3P25940 1745 aaPredicted RBP12.67□□□□□ -0.38
PTCH1-201ENST00000331920 DEFB113Q30KQ7 82 aa12.67□□□□□ -0.38
PTCH1-201ENST00000331920 TOMM6Q96B49 74 aa12.67□□□□□ -0.38
PTCH1-201ENST00000331920 DEFB1P60022 68 aa12.66□□□□□ -0.38
PTCH1-201ENST00000331920 FHL1Q13642 323 aa12.66□□□□□ -0.38
PTCH1-201ENST00000331920 C10orf105Q8TEF2 133 aa12.66□□□□□ -0.38
PTCH1-201ENST00000331920 ATG2AQ2TAZ0 1938 aa12.66□□□□□ -0.38
PTCH1-201ENST00000331920 COL24A1Q17RW2 1714 aa12.66□□□□□ -0.38
PTCH1-201ENST00000331920 C15orf65H3BRN8 121 aa12.66□□□□□ -0.38
PTCH1-201ENST00000331920 IGLC6P0CF74 106 aa12.65□□□□□ -0.38
PTCH1-201ENST00000331920 P0DMU3 169 aa12.65□□□□□ -0.38
PTCH1-201ENST00000331920 FAM231AP0DMU4 169 aa12.65□□□□□ -0.38
PTCH1-201ENST00000331920 FAM231CP0DMU5 169 aa12.65□□□□□ -0.38
PTCH1-201ENST00000331920 CSRP3P50461 194 aa12.65□□□□□ -0.38
PTCH1-201ENST00000331920 TNS1Q9HBL0 1735 aaKnown RBP12.65□□□□□ -0.38
PTCH1-201ENST00000331920 Q6ZVQ6 151 aa12.64□□□□□ -0.39
PTCH1-201ENST00000331920 PDE6GP18545 87 aa12.64□□□□□ -0.39
PTCH1-201ENST00000331920 IGLV9-49A0A0B4J1Y8 123 aa12.64□□□□□ -0.39
PTCH1-201ENST00000331920 TCL1BO95988 128 aa12.64□□□□□ -0.39
PTCH1-201ENST00000331920 FAM30AQ9NZY2 134 aa12.64□□□□□ -0.39
PTCH1-201ENST00000331920 EXPH5Q8NEV8 1989 aa12.64□□□□□ -0.39
PTCH1-201ENST00000331920 WT1P19544 449 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-201ENST00000331920 KIAA1671Q9BY89 1806 aa12.63□□□□□ -0.39
PTCH1-201ENST00000331920 C2orf70A6NJV1 201 aa12.63□□□□□ -0.39
PTCH1-201ENST00000331920 WFDC13Q8IUB5 93 aa12.63□□□□□ -0.39
PTCH1-201ENST00000331920 LINC00311Q8N616 119 aa12.63□□□□□ -0.39
PTCH1-201ENST00000331920 M0R2N4 97 aa12.63□□□□□ -0.39
PTCH1-201ENST00000331920 C7orf33Q8WU49 177 aa12.63□□□□□ -0.39
PTCH1-201ENST00000331920 MDFICQ9P1T7 246 aa12.63□□□□□ -0.39
PTCH1-201ENST00000331920 GRNP28799 593 aaKnown RBP12.63□□□□□ -0.39
PTCH1-201ENST00000331920 PRYO14603 147 aa12.62□□□□□ -0.39
PTCH1-201ENST00000331920 IGHV1-58A0A0C4DH39 117 aa12.62□□□□□ -0.39
PTCH1-201ENST00000331920 SPG11Q96JI7 2443 aa12.62□□□□□ -0.39
PTCH1-201ENST00000331920 ZNF503-AS2A6NEH8 195 aa12.62□□□□□ -0.39
PTCH1-201ENST00000331920 C11orf86A6NJI1 115 aa12.62□□□□□ -0.39
PTCH1-201ENST00000331920 PLA2G2AP14555 144 aa12.61□□□□□ -0.39
PTCH1-201ENST00000331920 SIPA1L1O43166 1804 aa12.61□□□□□ -0.39
PTCH1-201ENST00000331920 IGKV2-28A0A075B6P5 120 aa12.61□□□□□ -0.39
PTCH1-201ENST00000331920 IGKV2D-28P01615 120 aa12.61□□□□□ -0.39
PTCH1-201ENST00000331920 LINC00643Q86TS7 51 aa12.61□□□□□ -0.39
PTCH1-201ENST00000331920 OTOGLQ3ZCN5 2332 aa12.61□□□□□ -0.39
PTCH1-201ENST00000331920 RNASE8Q8TDE3 154 aaKnown RBP12.6□□□□□ -0.39
PTCH1-201ENST00000331920 LENEPQ9Y5L5 61 aa12.6□□□□□ -0.39
PTCH1-201ENST00000331920 MED14OSP0DP75 135 aa12.6□□□□□ -0.39
PTCH1-201ENST00000331920 E9PLD3 99 aa12.6□□□□□ -0.39
PTCH1-201ENST00000331920 PLA2G1BP04054 148 aaKnown RBP12.6□□□□□ -0.39
PTCH1-201ENST00000331920 POM121L12Q8N7R1 296 aa12.6□□□□□ -0.39
PTCH1-201ENST00000331920 Q8N9L7 120 aa12.6□□□□□ -0.39
PTCH1-201ENST00000331920 RETNLBQ9BQ08 111 aa12.6□□□□□ -0.39
PTCH1-201ENST00000331920 IGLV2-18A0A075B6J9 118 aa12.6□□□□□ -0.39
PTCH1-201ENST00000331920 REG3AQ06141 175 aa12.6□□□□□ -0.39
PTCH1-201ENST00000331920 DENND4CQ5VZ89 1909 aa12.59□□□□□ -0.39
PTCH1-201ENST00000331920 SLX1AQ9BQ83 275 aa12.59□□□□□ -0.39
PTCH1-201ENST00000331920 Q8NFD4 153 aa12.59□□□□□ -0.39
PTCH1-201ENST00000331920 XAGE1AQ9HD64 81 aa12.59□□□□□ -0.39
PTCH1-201ENST00000331920 UBE2D2P62837 147 aa12.58□□□□□ -0.39
PTCH1-201ENST00000331920 H3BT86 120 aa12.58□□□□□ -0.4
PTCH1-201ENST00000331920 TIMM17BO60830 172 aa12.58□□□□□ -0.4
PTCH1-201ENST00000331920 RIF1Q5UIP0 2472 aaKnown RBP12.58□□□□□ -0.4
PTCH1-201ENST00000331920 LY6G6EA0A0G2JKS1 128 aa12.58□□□□□ -0.4
PTCH1-201ENST00000331920 PRAC2D3DTV9 90 aa12.58□□□□□ -0.4
PTCH1-201ENST00000331920 MIAQ16674 131 aa12.58□□□□□ -0.4
PTCH1-201ENST00000331920 CSPG4Q6UVK1 2322 aa12.57□□□□□ -0.4
PTCH1-201ENST00000331920 IGHV7-81A0A0B4J1V7 117 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms